EnhancerDB
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  3. vista23727[chr17:2626418-2626796]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23727[chr17:2626418-2626796]
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Tissue distribution of vista23727
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Transcription factor that possibly regulate vista23727[chr17:2626418-2626796]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2626408 2626424 ZNF143 JASPAR yes 21185001
chr17 2626408 2626424 ZNF143 JASPAR yes 52768772
chr17 2626417 2626431 GLIS2 JASPAR yes 21185002
chr17 2626417 2626431 GLIS2 JASPAR yes 52768773
chr17 2626418 2626438 RREB1 JASPAR yes 21185003
chr17 2626418 2626438 RREB1 JASPAR yes 52768774
chr17 2626419 2626439 RREB1 JASPAR yes 21185004
chr17 2626419 2626439 RREB1 JASPAR yes 52768775
chr17 2626422 2626442 RREB1 JASPAR yes 21185005
chr17 2626422 2626442 RREB1 JASPAR yes 52768776
chr17 2626427 2626433 HiNF-A TRANSFAC yes 21185006
chr17 2626427 2626433 HiNF-A TRANSFAC yes 52768777
chr17 2626432 2626444 IRF1 JASPAR yes 21185007
chr17 2626432 2626444 IRF1 JASPAR yes 52768778
chr17 2626445 2626449 NFE TRANSFAC yes 21185008
chr17 2626445 2626449 NFE TRANSFAC yes 52768779
chr17 2626459 2626474 STAT1 JASPAR yes 21185009
chr17 2626459 2626474 STAT1 JASPAR yes 52768780
chr17 2626461 2626472 STAT1 JASPAR yes 21185010
chr17 2626461 2626472 STAT3 JASPAR yes 21185011
chr17 2626461 2626472 STAT1 JASPAR yes 52768781
chr17 2626461 2626472 STAT3 JASPAR yes 52768782
chr17 2626477 2626491 SPI1 JASPAR yes 21185012
chr17 2626477 2626491 SPI1 JASPAR yes 52768783
chr17 2626477 2626498 IRF1 JASPAR yes 21185013
chr17 2626477 2626498 IRF1 JASPAR yes 52768784
chr17 2626488 2626500 IRF1 JASPAR yes 21185014
chr17 2626488 2626500 IRF1 JASPAR yes 52768785
chr17 2626488 2626502 IRF7 JASPAR yes 21185015
chr17 2626488 2626502 IRF8 JASPAR yes 21185016
chr17 2626488 2626502 IRF7 JASPAR yes 52768786
chr17 2626488 2626502 IRF8 JASPAR yes 52768787
chr17 2626550 2626564 TLX1 JASPAR yes 21185017
chr17 2626550 2626564 TLX1 JASPAR yes 52768788
chr17 2626550 2626568 ESR2 JASPAR yes 21185018
chr17 2626550 2626568 ESR2 JASPAR yes 52768789
chr17 2626551 2626568 ESR1 JASPAR yes 21185019
chr17 2626551 2626568 ESR1 JASPAR yes 52768790
chr17 2626635 2626645 SP1 JASPAR yes 21185020
chr17 2626635 2626645 SP1 JASPAR yes 52768791
chr17 2626635 2626654 PAX5 JASPAR yes 21185021
chr17 2626635 2626654 PAX5 JASPAR yes 52768792
chr17 2626638 2626643 SP1 TRANSFAC yes 21185022
chr17 2626638 2626643 SP1 TRANSFAC yes 52768793
chr17 2626656 2626660 YY1 TRANSFAC yes 21185023
chr17 2626656 2626660 YY1 TRANSFAC yes 52768794
chr17 2626672 2626685 NFKB1 JASPAR yes 21185024
chr17 2626672 2626685 NFKB2 JASPAR yes 21185025
chr17 2626672 2626685 NFKB1 JASPAR yes 52768795
chr17 2626672 2626685 NFKB2 JASPAR yes 52768796
chr17 2626675 2626686 CEBPB JASPAR yes 21185026
chr17 2626675 2626686 CEBPB JASPAR yes 52768797
chr17 2626700 2626718 RARA JASPAR yes 21185027
chr17 2626700 2626718 RARA JASPAR yes 52768798
chr17 2626707 2626720 NR2F1 JASPAR yes 21185028
chr17 2626707 2626720 NR2F1 JASPAR yes 52768799
chr17 2626711 2626719 CREB1 JASPAR yes 21185029
chr17 2626711 2626719 CREB1 JASPAR yes 52768800
chr17 2626715 2626725 SREBF2 JASPAR yes 21185030
chr17 2626715 2626725 SREBF2 JASPAR yes 52768801
chr17 2626715 2626726 USF1 JASPAR yes 21185031
chr17 2626715 2626726 USF2 JASPAR yes 21185032
chr17 2626715 2626726 USF1 JASPAR yes 52768802
chr17 2626715 2626726 USF2 JASPAR yes 52768803
chr17 2626724 2626736 ZBTB7A JASPAR yes 21185033
chr17 2626724 2626736 ZBTB7A JASPAR yes 52768804
chr17 2626725 2626730 SP1 TRANSFAC yes 21185034
chr17 2626725 2626730 SP1 TRANSFAC yes 52768805
chr17 2626728 2626742 PLAG1 JASPAR yes 21185035
chr17 2626728 2626742 PLAG1 JASPAR yes 52768806
chr17 2626760 2626773 SMAD2 JASPAR yes 21185036
chr17 2626760 2626773 SMAD2 JASPAR yes 52768807
chr17 2626764 2626775 FOSL2 JASPAR yes 21185037
chr17 2626764 2626775 FOSL2 JASPAR yes 52768808
chr17 2626771 2626781 SP1 JASPAR yes 21185038
chr17 2626771 2626781 SP1 JASPAR yes 52768809
SNP sites on vista23727[chr17:2626418-2626796]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2626432 rs758419 A C
HiNF-A IRF1 RREB1
4703610
chr17 2626442 rs538860698 ACTC A
IRF1 RREB1
4703611
chr17 2626630 rs2005805 T C no 4703612
chr17 2626645 rs563777763 G A
PAX5 SP1
4703613
chr17 2626791 rs140994996 CTCT C no 4703614
chr17 2626791 rs377055707 CTCT C no 4703615
Genes possibly regulated by vista23727[chr17:2626418-2626796]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 2592680 2615957 - CLUH ENSG00000132361.12 2615957 0.71 1.0 15242 89539
chr17 2680350 2941033 + RAP1GAP2 ENSG00000132359.9 2680350 0.8 1.0 15243 46446
Expression level of Genes
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miRNAs possibly regulated by vista23727[chr17:2626418-2626796]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 2596155 2596177 - hsa-miR-6776-3p MIMAT0027453 2615048 0.005206764490726795 0.0 0.0 650
Expression level of miRNAs
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