EnhancerDB
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  3. vista23729[chr17:2627618-2628097]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23729[chr17:2627618-2628097]
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Tissue distribution of vista23729
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Transcription factor that possibly regulate vista23729[chr17:2627618-2628097]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2627208 2628382 POLR2A UCSC Txn Factor no Conserved 108231076
chr17 2627208 2628382 POLR2A UCSC Txn Factor no Conserved 108231077
chr17 2627217 2627767 TCF7L2 UCSC Txn Factor no Conserved 108231080
chr17 2627217 2627767 TCF7L2 UCSC Txn Factor no Conserved 108231081
chr17 2627954 2628464 E2F6 UCSC Txn Factor no Conserved 108231118
chr17 2628002 2628432 CTCF UCSC Txn Factor no Conserved 108231124
chr17 2627611 2627625 RXRB JASPAR yes 21185122
chr17 2627611 2627625 RXRG JASPAR yes 21185123
chr17 2627611 2627625 RXRB JASPAR yes 52768945
chr17 2627611 2627625 RXRG JASPAR yes 52768946
chr17 2627611 2627626 NR2C2 JASPAR yes 21185124
chr17 2627611 2627626 NR2C2 JASPAR yes 52768947
chr17 2627627 2627642 TFAP2A JASPAR yes 21185125
chr17 2627627 2627642 TFAP2A JASPAR yes 52768948
chr17 2627630 2627641 TFAP2A JASPAR yes 21185126
chr17 2627630 2627641 TFAP2B JASPAR yes 21185127
chr17 2627630 2627641 TFAP2A JASPAR yes 52768949
chr17 2627630 2627641 TFAP2B JASPAR yes 52768950
chr17 2627630 2627642 TFAP2A JASPAR yes 21185128
chr17 2627630 2627642 TFAP2B JASPAR yes 21185129
chr17 2627630 2627642 TFAP2C JASPAR yes 21185130
chr17 2627630 2627642 TFAP2A JASPAR yes 52768951
chr17 2627630 2627642 TFAP2B JASPAR yes 52768952
chr17 2627630 2627642 TFAP2C JASPAR yes 52768953
chr17 2627674 2627691 PAX9 JASPAR yes 21185131
chr17 2627674 2627691 PAX9 JASPAR yes 52768954
chr17 2627679 2627691 CREB1 JASPAR yes 21185132
chr17 2627679 2627691 CREB1 JASPAR yes 52768955
chr17 2627709 2627721 HINFP JASPAR yes 21185133
chr17 2627709 2627721 HINFP JASPAR yes 52768956
chr17 2627712 2627716 H4TF2 TRANSFAC yes 21185134
chr17 2627712 2627716 H4TF2 TRANSFAC yes 52768957
chr17 2627760 2627764 H4TF2 TRANSFAC yes 21185135
chr17 2627760 2627764 H4TF2 TRANSFAC yes 52768958
chr17 2627765 2627779 PLAG1 JASPAR yes 21185136
chr17 2627765 2627779 PLAG1 JASPAR yes 52768959
chr17 2627774 2627779 TFAP2A TRANSFAC yes 21185137
chr17 2627774 2627779 TFAP2A TRANSFAC yes 52768960
chr17 2627774 2627780 MZF1 JASPAR yes 21185138
chr17 2627774 2627780 MZF1 JASPAR yes 52768961
chr17 2627779 2627784 SP1 TRANSFAC yes 21185139
chr17 2627779 2627784 SP1 TRANSFAC yes 52768962
chr17 2627826 2627839 ELF1 JASPAR yes 21185140
chr17 2627826 2627839 ELF1 JASPAR yes 52768963
chr17 2627829 2627836 SPIB JASPAR yes 21185141
chr17 2627829 2627836 SPIB JASPAR yes 52768964
chr17 2627829 2627839 GABPA JASPAR yes 21185142
chr17 2627829 2627839 GABPA JASPAR yes 52768965
chr17 2627848 2627852 LFA1 TRANSFAC yes 21185143
chr17 2627848 2627852 LFA1 TRANSFAC yes 52768966
chr17 2627849 2627861 INSM1 JASPAR yes 21185144
chr17 2627849 2627861 INSM1 JASPAR yes 52768967
chr17 2627873 2627884 NRF1 JASPAR yes 21185145
chr17 2627873 2627884 NRF1 JASPAR yes 52768968
chr17 2627886 2627890 H4TF2 TRANSFAC yes 21185146
chr17 2627886 2627890 H4TF2 TRANSFAC yes 52768969
chr17 2627892 2627897 SP1 TRANSFAC yes 21185147
chr17 2627892 2627897 SP1 TRANSFAC yes 52768970
chr17 2627911 2627916 SP1 TRANSFAC yes 21185148
chr17 2627911 2627916 SP1 TRANSFAC yes 52768971
chr17 2627926 2627939 TFAP2A JASPAR yes 21185149
chr17 2627926 2627939 TFAP2B JASPAR yes 21185150
chr17 2627926 2627939 TFAP2C JASPAR yes 21185151
chr17 2627926 2627939 TFAP2A JASPAR yes 52768972
chr17 2627926 2627939 TFAP2B JASPAR yes 52768973
chr17 2627926 2627939 TFAP2C JASPAR yes 52768974
chr17 2627934 2627938 LFA1 TRANSFAC yes 21185152
chr17 2627934 2627938 LFA1 TRANSFAC yes 52768975
chr17 2627934 2627949 ZIC4 JASPAR yes 21185153
chr17 2627934 2627949 ZIC4 JASPAR yes 52768976
chr17 2627935 2627949 ZIC1 JASPAR yes 21185154
chr17 2627935 2627949 ZIC1 JASPAR yes 52768977
chr17 2627941 2627946 SP1 TRANSFAC yes 21185155
chr17 2627941 2627946 SP1 TRANSFAC yes 52768978
chr17 2627942 2627947 SP1 TRANSFAC yes 21185156
chr17 2627942 2627947 SP1 TRANSFAC yes 52768979
chr17 2627945 2627950 SP1 TRANSFAC yes 21185157
chr17 2627945 2627950 SP1 TRANSFAC yes 52768980
chr17 2627949 2627954 SP1 TRANSFAC yes 21185158
chr17 2627949 2627954 SP1 TRANSFAC yes 52768981
chr17 2627998 2628003 SP1 TRANSFAC yes 21185159
chr17 2627998 2628003 SP1 TRANSFAC yes 52768982
chr17 2628011 2628016 SP1 TRANSFAC yes 21185160
chr17 2628011 2628016 SP1 TRANSFAC yes 52768983
chr17 2628030 2628044 MTF1 JASPAR yes 21185161
chr17 2628030 2628044 MTF1 JASPAR yes 52768984
chr17 2628057 2628062 SP1 TRANSFAC yes 21185162
chr17 2628057 2628062 SP1 TRANSFAC yes 52768985
chr17 2628089 2628098 HIC2 JASPAR yes 21185163
chr17 2628089 2628098 HIC2 JASPAR yes 52768986
SNP sites on vista23729[chr17:2627618-2628097]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2627744 rs551163023 G C
POLR2A TCF7L2
4703625
chr17 2627802 rs111355210 G A
POLR2A
4703626
Genes possibly regulated by vista23729[chr17:2627618-2628097]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 2592680 2615957 - CLUH ENSG00000132361.12 2615957 0.71 1.0 15242 88339
chr17 2680350 2941033 + RAP1GAP2 ENSG00000132359.9 2680350 0.8 1.0 15243 47747
Expression level of Genes
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miRNAs possibly regulated by vista23729[chr17:2627618-2628097]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results