EnhancerDB
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  3. vista2374[chr1:89819962-89820089]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2374[chr1:89819962-89820089]
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Tissue distribution of vista2374
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Transcription factor that possibly regulate vista2374[chr1:89819962-89820089]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 89819969 89819979 HMBOX1 JASPAR yes 118324787
chr1 89819971 89819974 MYB TRANSFAC yes 118324788
chr1 89819982 89819996 EBF1 JASPAR yes 118324789
chr1 89819998 89820009 ELK4 JASPAR yes 118324790
chr1 89819998 89820009 FLI1 JASPAR yes 118324791
chr1 89819999 89820009 ETV6 JASPAR yes 118324792
chr1 89819999 89820010 ELF5 JASPAR yes 118324793
chr1 89819999 89820011 ELF1 JASPAR yes 118324794
chr1 89819999 89820011 ELF4 JASPAR yes 118324795
chr1 89819999 89820012 ELF1 JASPAR yes 118324796
chr1 89820000 89820007 SPI1 JASPAR yes 118324797
chr1 89820000 89820008 EHF JASPAR yes 118324798
chr1 89820000 89820008 FEV JASPAR yes 118324799
chr1 89820024 89820030 SOX10 JASPAR yes 118324800
chr1 89820028 89820039 CEBPA JASPAR yes 118324801
chr1 89820028 89820048 PPARG JASPAR yes 118324802
chr1 89820029 89820040 CEBPB JASPAR yes 118324803
chr1 89820033 89820047 RXRB JASPAR yes 118324804
chr1 89820033 89820047 RXRG JASPAR yes 118324805
chr1 89820038 89820049 ESRRB JASPAR yes 118324806
chr1 89820040 89820057 RARA JASPAR yes 118324807
chr1 89820056 89820074 SRF JASPAR yes 118324808
chr1 89820063 89820077 SPI1 JASPAR yes 118324809
chr1 89820063 89820077 SPIC JASPAR yes 118324810
chr1 89820063 89820078 STAT2 JASPAR yes 118324811
chr1 89820069 89820074 ETS2 TRANSFAC yes 118324812
SNP sites on vista2374[chr1:89819962-89820089]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 89819983 rs148781558 A G
EBF1
468588
chr1 89820021 rs143300484 A C no 468589
chr1 89820022 rs7416387 G T no 468590
chr1 89820030 rs587744372 G A
CEBPA CEBPB PPARG SOX10
468591
chr1 89820088 rs587668787 G A no 468592
Genes possibly regulated by vista2374[chr1:89819962-89820089]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 89724633 89738544 - GBP5 ENSG00000154451.10 89738544 0.98 0.96 879 18582
chr1 89829617 89852020 + GBP6 ENSG00000183347.13 89829617 1.0 0.96 880 90472
Expression level of Genes
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miRNAs possibly regulated by vista2374[chr1:89819962-89820089]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results