EnhancerDB
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  3. vista23744[chr17:2952123-2952503]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23744[chr17:2952123-2952503]
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Tissue distribution of vista23744
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Transcription factor that possibly regulate vista23744[chr17:2952123-2952503]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2951916 2952386 CTCF UCSC Txn Factor no Conserved 108231448
chr17 2951928 2952817 POLR2A UCSC Txn Factor no Conserved 108231451
chr17 2952026 2952292 RAD21 UCSC Txn Factor no Conserved 108231473
chr17 2952067 2952476 GABPA UCSC Txn Factor no Conserved 108231498
chr17 2952127 2952520 SP1 UCSC Txn Factor no Conserved 108231513
chr17 2952202 2952442 SP2 UCSC Txn Factor no Conserved 108231530
chr17 2952211 2952575 NFYB UCSC Txn Factor no Conserved 108231533
chr17 2952132 2952143 E2F4 JASPAR yes 21185904
chr17 2952132 2952143 E2F4 JASPAR yes 52794205
chr17 2952135 2952141 SP1 TRANSFAC yes 21185905
chr17 2952135 2952141 SP1 TRANSFAC yes 52794206
chr17 2952137 2952142 SP1 TRANSFAC yes 21185906
chr17 2952137 2952142 SP1 TRANSFAC yes 52794207
chr17 2952145 2952164 CTCF JASPAR yes 21185907
chr17 2952145 2952164 CTCF JASPAR yes 52794208
chr17 2952154 2952160 YY1 JASPAR yes 21185908
chr17 2952154 2952160 YY1 JASPAR yes 52794209
chr17 2952188 2952201 ZBTB18 JASPAR yes 21185909
chr17 2952188 2952201 ZBTB18 JASPAR yes 52794210
chr17 2952189 2952201 NHLH1 JASPAR yes 21185910
chr17 2952189 2952201 NHLH1 JASPAR yes 52794211
chr17 2952196 2952205 THAP1 JASPAR yes 21185911
chr17 2952196 2952205 THAP1 JASPAR yes 52794212
chr17 2952199 2952204 SP1 TRANSFAC yes 21185912
chr17 2952199 2952204 SP1 TRANSFAC yes 52794213
chr17 2952207 2952226 PAX5 JASPAR yes 21185913
chr17 2952207 2952226 PAX5 JASPAR yes 52794214
chr17 2952212 2952226 PAX6 JASPAR yes 21185914
chr17 2952212 2952226 PAX6 JASPAR yes 52794215
chr17 2952224 2952243 REST JASPAR yes 21185915
chr17 2952224 2952243 REST JASPAR yes 52794216
chr17 2952260 2952267 E2F1 TRANSFAC yes 21185916
chr17 2952260 2952267 E2F1 TRANSFAC yes 52794217
chr17 2952260 2952281 ZNF263 JASPAR yes 21185917
chr17 2952260 2952281 ZNF263 JASPAR yes 52794218
chr17 2952269 2952276 NFATC2 JASPAR yes 21185918
chr17 2952269 2952276 NFATC2 JASPAR yes 52794219
chr17 2952277 2952293 NFYA JASPAR yes 21185919
chr17 2952277 2952293 NFYA JASPAR yes 52794220
chr17 2952280 2952295 NFYB JASPAR yes 21185920
chr17 2952280 2952295 NFYB JASPAR yes 52794221
chr17 2952288 2952292 NFE TRANSFAC yes 21185921
chr17 2952288 2952292 NFE TRANSFAC yes 52794222
chr17 2952292 2952304 TFAP2A JASPAR yes 21185922
chr17 2952292 2952304 TFAP2A JASPAR yes 52794223
chr17 2952294 2952303 TFAP2A JASPAR yes 21185923
chr17 2952294 2952303 TFAP2A JASPAR yes 52794224
chr17 2952309 2952315 TCF4 TRANSFAC yes 21185924
chr17 2952309 2952315 TCF4 TRANSFAC yes 52794225
chr17 2952318 2952331 TFAP2A JASPAR yes 21185925
chr17 2952318 2952331 TFAP2B JASPAR yes 21185926
chr17 2952318 2952331 TFAP2C JASPAR yes 21185927
chr17 2952318 2952331 TFAP2A JASPAR yes 52794226
chr17 2952318 2952331 TFAP2B JASPAR yes 52794227
chr17 2952318 2952331 TFAP2C JASPAR yes 52794228
chr17 2952319 2952325 SP1 TRANSFAC yes 21185928
chr17 2952319 2952325 SP1 TRANSFAC yes 52794229
chr17 2952341 2952360 PAX5 JASPAR yes 21185929
chr17 2952341 2952360 PAX5 JASPAR yes 52794230
chr17 2952343 2952356 SCRT2 JASPAR yes 21185930
chr17 2952343 2952356 SCRT2 JASPAR yes 52794231
chr17 2952343 2952358 SCRT1 JASPAR yes 21185931
chr17 2952343 2952358 SCRT1 JASPAR yes 52794232
chr17 2952359 2952363 H4TF2 TRANSFAC yes 21185932
chr17 2952359 2952363 H4TF2 TRANSFAC yes 52794233
chr17 2952365 2952382 BCL6B JASPAR yes 21185933
chr17 2952365 2952382 BCL6B JASPAR yes 52794234
chr17 2952374 2952392 NFYA JASPAR yes 21185934
chr17 2952374 2952392 NFYA JASPAR yes 52794235
chr17 2952377 2952393 NFYA JASPAR yes 21185935
chr17 2952377 2952393 NFYA JASPAR yes 52794236
chr17 2952380 2952395 NFYB JASPAR yes 21185936
chr17 2952380 2952395 NFYB JASPAR yes 52794237
chr17 2952386 2952390 ESR1 TRANSFAC yes 21185937
chr17 2952386 2952390 ESR1 TRANSFAC yes 52794238
chr17 2952391 2952403 HNF1B JASPAR yes 21185938
chr17 2952391 2952403 HNF1B JASPAR yes 52794239
chr17 2952414 2952424 RELA JASPAR yes 21185939
chr17 2952414 2952424 RELA JASPAR yes 52794240
chr17 2952414 2952425 NFKB1 JASPAR yes 21185940
chr17 2952414 2952425 NFKB1 JASPAR yes 52794241
chr17 2952415 2952433 NFYA JASPAR yes 21185941
chr17 2952415 2952433 NFYA JASPAR yes 52794242
chr17 2952418 2952434 NFYA JASPAR yes 21185942
chr17 2952418 2952434 NFYA JASPAR yes 52794243
chr17 2952421 2952436 NFYB JASPAR yes 21185943
chr17 2952421 2952436 NFYB JASPAR yes 52794244
chr17 2952432 2952436 NFE TRANSFAC yes 21185944
chr17 2952432 2952436 NFE TRANSFAC yes 52794245
chr17 2952441 2952462 IRF1 JASPAR yes 21185945
chr17 2952441 2952462 IRF1 JASPAR yes 52794246
chr17 2952445 2952459 IRF8 JASPAR yes 21185946
chr17 2952445 2952459 IRF8 JASPAR yes 52794247
chr17 2952465 2952470 TFAP2A TRANSFAC yes 21185947
chr17 2952465 2952470 TFAP2A TRANSFAC yes 52794248
chr17 2952465 2952471 MZF1 JASPAR yes 21185948
chr17 2952465 2952471 MZF1 JASPAR yes 52794249
chr17 2952478 2952490 INSM1 JASPAR yes 21185949
chr17 2952478 2952490 INSM1 JASPAR yes 52794250
chr17 2952478 2952498 RREB1 JASPAR yes 21185950
chr17 2952478 2952498 RREB1 JASPAR yes 52794251
SNP sites on vista23744[chr17:2952123-2952503]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2952190 rs556734958 A C
CTCF GABPA NHLH1 POLR2A RAD21 SP1 ZBTB18
4706714
chr17 2952295 rs11078428 C G
CTCF GABPA NFYB POLR2A SP1 SP2 TFAP2A
4706715
chr17 2952303 rs565585973 C T
CTCF GABPA NFYB POLR2A SP1 SP2 TFAP2A
4706716
chr17 2952304 rs11078429 C G
CTCF GABPA NFYB POLR2A SP1 SP2 TFAP2A
4706717
chr17 2952309 rs79257575 A T
CTCF GABPA NFYB POLR2A SP1 SP2 TCF4
4706718
chr17 2952310 rs11078430 C G
CTCF GABPA NFYB POLR2A SP1 SP2 TCF4
4706719
chr17 2952335 rs11078431 G C
CTCF GABPA NFYB POLR2A SP1 SP2
4706720
chr17 2952338 rs10852855 T A
CTCF GABPA NFYB POLR2A SP1 SP2
4706721
chr17 2952430 rs11078432 T C
GABPA NFYA NFYB POLR2A SP1 SP2
4706722
chr17 2952439 rs11078433 C T
GABPA NFYB POLR2A SP1 SP2
4706723
chr17 2952484 rs111407154 G A,C,T
INSM1 NFYB POLR2A RREB1 SP1
4706724
chr17 2952485 rs148555452 G A,T
INSM1 NFYB POLR2A RREB1 SP1
4706725
chr17 2952499 rs376470436 C T
NFYB POLR2A SP1
4706726
Genes possibly regulated by vista23744[chr17:2952123-2952503]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 2965963 2966901 - OR1D5 ENSG00000262628.1 2966901 0.0 0.0 15244 85602
chr17 2995352 2996290 - OR1D2 ENSG00000184166.1 2996290 0.0 0.0 15245 56213
chr17 3029878 3030875 - OR1G1 ENSG00000183024.3 3030875 1.0 0.0 15246 21628
Expression level of Genes
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miRNAs possibly regulated by vista23744[chr17:2952123-2952503]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results