EnhancerDB
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  3. vista23749[chr17:3453416-3453706]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23749[chr17:3453416-3453706]
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Tissue distribution of vista23749
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Transcription factor that possibly regulate vista23749[chr17:3453416-3453706]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 3453402 3453417 NFYB JASPAR yes 21186127
chr17 3453402 3453417 NFYB JASPAR yes 52795408
chr17 3453404 3453420 NFYA JASPAR yes 21186128
chr17 3453404 3453420 NFYA JASPAR yes 52795409
chr17 3453405 3453423 NFYA JASPAR yes 21186129
chr17 3453405 3453423 NFYA JASPAR yes 52795410
chr17 3453418 3453426 GATA3 JASPAR yes 21186130
chr17 3453418 3453426 GATA3 JASPAR yes 52795414
chr17 3453421 3453433 FOXC2 JASPAR yes 21186131
chr17 3453421 3453433 FOXC2 JASPAR yes 52795415
chr17 3453431 3453434 MYB TRANSFAC yes 21186132
chr17 3453431 3453434 MYB TRANSFAC yes 52795416
chr17 3453455 3453468 ATF4 JASPAR yes 21186133
chr17 3453455 3453468 ATF4 JASPAR yes 52795417
chr17 3453486 3453498 NHLH1 JASPAR yes 21186134
chr17 3453486 3453498 NHLH1 JASPAR yes 52795418
chr17 3453506 3453527 ZNF263 JASPAR yes 21186135
chr17 3453506 3453527 ZNF263 JASPAR yes 52795419
chr17 3453509 3453530 ZNF263 JASPAR yes 21186136
chr17 3453509 3453530 ZNF263 JASPAR yes 52795420
chr17 3453532 3453536 H1TF2 TRANSFAC yes 21186137
chr17 3453532 3453536 NFE TRANSFAC yes 21186138
chr17 3453532 3453536 SRF TRANSFAC yes 21186139
chr17 3453532 3453536 H1TF2 TRANSFAC yes 52795421
chr17 3453532 3453536 NFE TRANSFAC yes 52795422
chr17 3453532 3453536 SRF TRANSFAC yes 52795423
chr17 3453563 3453569 SOX10 JASPAR yes 21186140
chr17 3453563 3453569 SOX10 JASPAR yes 52795424
chr17 3453602 3453618 ZNF143 JASPAR yes 21186141
chr17 3453602 3453618 ZNF143 JASPAR yes 52795425
chr17 3453606 3453617 FOXH1 JASPAR yes 21186142
chr17 3453606 3453617 FOXH1 JASPAR yes 52795426
chr17 3453617 3453622 SP1 TRANSFAC yes 21186143
chr17 3453617 3453622 SP1 TRANSFAC yes 52795427
chr17 3453617 3453631 PLAG1 JASPAR yes 21186144
chr17 3453617 3453631 PLAG1 JASPAR yes 52795428
chr17 3453619 3453635 SRF JASPAR yes 21186145
chr17 3453619 3453635 SRF JASPAR yes 52795429
chr17 3453630 3453634 H4TF2 TRANSFAC yes 21186146
chr17 3453630 3453634 H4TF2 TRANSFAC yes 52795430
chr17 3453659 3453664 GATA2 JASPAR yes 21186147
chr17 3453659 3453664 GATA2 JASPAR yes 52795431
chr17 3453660 3453666 ZNF354C JASPAR yes 21186148
chr17 3453660 3453666 ZNF354C JASPAR yes 52795432
chr17 3453661 3453671 NKX2-3 JASPAR yes 21186149
chr17 3453661 3453671 NKX2-3 JASPAR yes 52795433
chr17 3453662 3453671 NKX2-8 JASPAR yes 21186150
chr17 3453662 3453671 NKX2-8 JASPAR yes 52795434
chr17 3453669 3453684 TFAP2A JASPAR yes 21186151
chr17 3453669 3453684 TFAP2A JASPAR yes 52795435
chr17 3453681 3453696 TFAP2A JASPAR yes 21186152
chr17 3453681 3453696 TFAP2C JASPAR yes 21186153
chr17 3453681 3453696 TFAP2A JASPAR yes 52795436
chr17 3453681 3453696 TFAP2C JASPAR yes 52795437
chr17 3453682 3453703 ZNF263 JASPAR yes 21186154
chr17 3453682 3453703 ZNF263 JASPAR yes 52795438
chr17 3453684 3453695 TFAP2A JASPAR yes 21186155
chr17 3453684 3453695 TFAP2B JASPAR yes 21186156
chr17 3453684 3453695 TFAP2C JASPAR yes 21186157
chr17 3453684 3453695 TFAP2A JASPAR yes 52795439
chr17 3453684 3453695 TFAP2B JASPAR yes 52795440
chr17 3453684 3453695 TFAP2C JASPAR yes 52795441
chr17 3453685 3453694 TFAP2A JASPAR yes 21186158
chr17 3453685 3453694 TFAP2A JASPAR yes 52795442
chr17 3453695 3453700 ETS2 TRANSFAC yes 21186159
chr17 3453695 3453700 ETS2 TRANSFAC yes 52795443
chr17 3453705 3453709 YY1 TRANSFAC yes 21186160
chr17 3453705 3453709 YY1 TRANSFAC yes 52795444
chr17 3453706 3453714 FEV JASPAR yes 21186161
chr17 3453706 3453714 FEV JASPAR yes 52795445
chr17 3453706 3453719 JUN JASPAR yes 21186162
chr17 3453706 3453719 JUN JASPAR yes 52795446
SNP sites on vista23749[chr17:3453416-3453706]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 3453563 rs182983548 C G
SOX10
4707007
chr17 3453579 rs9898505 A G no 4707008
Genes possibly regulated by vista23749[chr17:3453416-3453706]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 3343313 3417146 - SPATA22 ENSG00000141255.8 3417146 0.81 0.99 15254 63730
chr17 3375668 3406713 + ASPA ENSG00000108381.6 3375668 0.94 0.84 15255 22252
chr17 3413796 3461289 - TRPV3 ENSG00000167723.10 3461289 0.89 1.0 15256 92417
chr17 3468738 3500392 - TRPV1 ENSG00000196689.6 3500392 0.77 0.9 15258 53314
chr17 3468738 3539543 - SHPK ENSG00000262304.1 3539543 0.91 0.9 15257 14163
chr17 3511556 3539616 - SHPK ENSG00000197417.7 3539616 0.68 0.96 15259 14090
chr17 3539762 3564836 + CTNS ENSG00000040531.10 3539762 0.65 0.99 15260 13944
Expression level of Genes
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miRNAs possibly regulated by vista23749[chr17:3453416-3453706]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results