EnhancerDB
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  3. vista2376[chr1:89910434-89910764]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2376[chr1:89910434-89910764]
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Tissue distribution of vista2376
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Transcription factor that possibly regulate vista2376[chr1:89910434-89910764]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 89910442 89910458 POU4F3 JASPAR yes 30597289
chr1 89910442 89910458 POU4F3 JASPAR yes 118324880
chr1 89910463 89910467 YY1 TRANSFAC yes 30597290
chr1 89910463 89910467 YY1 TRANSFAC yes 118324881
chr1 89910466 89910476 HOXA13 JASPAR yes 30597291
chr1 89910466 89910476 HOXB13 JASPAR yes 30597292
chr1 89910466 89910476 HOXD13 JASPAR yes 30597293
chr1 89910466 89910476 HOXA13 JASPAR yes 118324882
chr1 89910466 89910476 HOXB13 JASPAR yes 118324883
chr1 89910466 89910476 HOXD13 JASPAR yes 118324884
chr1 89910466 89910477 HOXA10 JASPAR yes 30597294
chr1 89910466 89910477 HOXA10 JASPAR yes 118324885
chr1 89910467 89910476 CDX1 JASPAR yes 30597295
chr1 89910467 89910476 CDX1 JASPAR yes 118324886
chr1 89910467 89910478 CDX2 JASPAR yes 30597296
chr1 89910467 89910478 CDX2 JASPAR yes 118324887
chr1 89910479 89910484 GATA2 JASPAR yes 30597297
chr1 89910479 89910484 GATA2 JASPAR yes 118324888
chr1 89910483 89910498 FOXP1 JASPAR yes 30597298
chr1 89910483 89910498 FOXP1 JASPAR yes 118324889
chr1 89910518 89910529 NFIL3 JASPAR yes 30597299
chr1 89910518 89910529 NFIL3 JASPAR yes 118324890
chr1 89910523 89910526 MYB TRANSFAC yes 30597300
chr1 89910523 89910526 MYB TRANSFAC yes 118324891
chr1 89910541 89910552 CEBPB JASPAR yes 30597301
chr1 89910541 89910552 CEBPB JASPAR yes 118324892
chr1 89910542 89910552 CEBPB JASPAR yes 30597302
chr1 89910542 89910552 CEBPE JASPAR yes 30597303
chr1 89910542 89910552 CEBPG JASPAR yes 30597304
chr1 89910542 89910552 CEBPB JASPAR yes 118324893
chr1 89910542 89910552 CEBPE JASPAR yes 118324894
chr1 89910542 89910552 CEBPG JASPAR yes 118324895
chr1 89910542 89910553 CEBPA JASPAR yes 30597305
chr1 89910542 89910553 CEBPA JASPAR yes 118324896
chr1 89910551 89910554 MYB TRANSFAC yes 30597306
chr1 89910551 89910554 MYB TRANSFAC yes 118324897
chr1 89910570 89910575 MYB TRANSFAC yes 30597307
chr1 89910570 89910575 MYB TRANSFAC yes 118324898
chr1 89910589 89910593 YY1 TRANSFAC yes 30597308
chr1 89910589 89910593 YY1 TRANSFAC yes 118324899
chr1 89910630 89910642 IRF1 JASPAR yes 30597309
chr1 89910630 89910642 IRF1 JASPAR yes 118324900
chr1 89910631 89910650 RFX2 JASPAR yes 30597310
chr1 89910631 89910650 RFX2 JASPAR yes 118324901
chr1 89910632 89910638 TCF4 TRANSFAC yes 30597311
chr1 89910632 89910638 TCF4 TRANSFAC yes 118324902
chr1 89910642 89910660 NR3C1 JASPAR yes 30597312
chr1 89910642 89910660 NR3C1 JASPAR yes 118324903
chr1 89910655 89910659 YY1 TRANSFAC yes 30597313
chr1 89910655 89910659 YY1 TRANSFAC yes 118324904
chr1 89910662 89910676 PAX6 JASPAR yes 30597314
chr1 89910662 89910676 PAX6 JASPAR yes 118324905
chr1 89910663 89910680 PAX1 JASPAR yes 30597315
chr1 89910663 89910680 PAX1 JASPAR yes 118324906
chr1 89910664 89910678 PAX6 JASPAR yes 30597316
chr1 89910664 89910678 PAX6 JASPAR yes 118324907
chr1 89910676 89910681 GATA2 JASPAR yes 30597317
chr1 89910676 89910681 GATA2 JASPAR yes 118324908
chr1 89910679 89910683 YY1 TRANSFAC yes 30597318
chr1 89910679 89910683 YY1 TRANSFAC yes 118324909
chr1 89910681 89910691 HOXD13 JASPAR yes 30597319
chr1 89910681 89910691 HOXD13 JASPAR yes 118324910
chr1 89910712 89910716 YY1 TRANSFAC yes 30597320
chr1 89910712 89910716 YY1 TRANSFAC yes 118324911
chr1 89910719 89910737 MAFF JASPAR yes 30597321
chr1 89910719 89910737 MAFF JASPAR yes 118324912
chr1 89910720 89910735 MAFK JASPAR yes 30597322
chr1 89910720 89910735 MAFK JASPAR yes 118324913
chr1 89910724 89910735 NRL JASPAR yes 30597323
chr1 89910724 89910735 NRL JASPAR yes 118324914
chr1 89910747 89910762 PRDM1 JASPAR yes 30597324
chr1 89910747 89910762 PRDM1 JASPAR yes 118324915
chr1 89910753 89910759 MYC TRANSFAC yes 30597325
chr1 89910753 89910759 MYC TRANSFAC yes 118324916
SNP sites on vista2376[chr1:89910434-89910764]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 89910577 rs11484919 G C no 469079
chr1 89910681 rs567665634 AT A
GATA2 HOXD13 YY1
469080
chr1 89910689 rs549256653 T C
HOXD13
469081
chr1 89910752 rs10922646 T C
PRDM1
469082
Genes possibly regulated by vista2376[chr1:89910434-89910764]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 89829617 89852020 + GBP6 ENSG00000183347.13 89829617 1.0 0.96 880 19183
chr1 89990395 90063423 + LRRC8B ENSG00000197147.8 89990395 0.78 0.99 881 20369
Expression level of Genes
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miRNAs possibly regulated by vista2376[chr1:89910434-89910764]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results