EnhancerDB
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  3. vista23760[chr17:3699697-3700093]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23760[chr17:3699697-3700093]
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Tissue distribution of vista23760
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Transcription factor that possibly regulate vista23760[chr17:3699697-3700093]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 3699669 3700169 RUNX3 UCSC Txn Factor no Conserved 108231822
chr17 3699775 3699926 BHLHE40 UCSC Txn Factor no Conserved 108231832
chr17 3699881 3700124 BATF UCSC Txn Factor no Conserved 108231846
chr17 3699900 3700140 IRF4 UCSC Txn Factor no Conserved 108231850
chr17 3699736 3699746 NFIA JASPAR yes 21186609
chr17 3699736 3699746 NFIA JASPAR yes 52806073
chr17 3699737 3699746 NFIX JASPAR yes 21186610
chr17 3699737 3699746 NFIX JASPAR yes 52806074
chr17 3699738 3699744 NFIC JASPAR yes 21186611
chr17 3699738 3699744 NFIC JASPAR yes 52806075
chr17 3699746 3699759 ELF3 JASPAR yes 21186612
chr17 3699746 3699759 ELF3 JASPAR yes 52806076
chr17 3699747 3699757 GABPA JASPAR yes 21186613
chr17 3699747 3699757 GABPA JASPAR yes 52806077
chr17 3699747 3699760 ELF1 JASPAR yes 21186614
chr17 3699747 3699760 ELF1 JASPAR yes 52806078
chr17 3699749 3699755 ETS1 JASPAR yes 21186615
chr17 3699749 3699755 SPI1 JASPAR yes 21186616
chr17 3699749 3699755 ETS1 JASPAR yes 52806079
chr17 3699749 3699755 SPI1 JASPAR yes 52806080
chr17 3699749 3699759 ELK1 JASPAR yes 21186617
chr17 3699749 3699759 ELK1 JASPAR yes 52806081
chr17 3699829 3699839 CLOCK JASPAR yes 21186618
chr17 3699829 3699839 MAX JASPAR yes 21186619
chr17 3699829 3699839 MNT JASPAR yes 21186620
chr17 3699829 3699839 CLOCK JASPAR yes 52806082
chr17 3699829 3699839 MAX JASPAR yes 52806083
chr17 3699829 3699839 MNT JASPAR yes 52806084
chr17 3699831 3699836 MYC TRANSFAC yes 21186621
chr17 3699831 3699836 USF1 TRANSFAC yes 21186622
chr17 3699831 3699836 USF2 TRANSFAC yes 21186623
chr17 3699831 3699836 MYC TRANSFAC yes 52806085
chr17 3699831 3699836 USF1 TRANSFAC yes 52806086
chr17 3699831 3699836 USF2 TRANSFAC yes 52806087
chr17 3699831 3699838 USF1 JASPAR yes 21186624
chr17 3699831 3699838 USF1 JASPAR yes 52806088
chr17 3699836 3699857 ZNF263 JASPAR yes 21186625
chr17 3699836 3699857 ZNF263 JASPAR yes 52806089
chr17 3699858 3699862 TEAD2 TRANSFAC yes 21186626
chr17 3699858 3699862 TEAD2 TRANSFAC yes 52806090
chr17 3699859 3699874 RUNX2 JASPAR yes 21186627
chr17 3699859 3699874 RUNX2 JASPAR yes 52806091
chr17 3699860 3699863 MYB TRANSFAC yes 21186628
chr17 3699860 3699863 MYB TRANSFAC yes 52806092
chr17 3699860 3699869 RUNX2 JASPAR yes 21186629
chr17 3699860 3699869 RUNX2 JASPAR yes 52806093
chr17 3699878 3699899 ZNF263 JASPAR yes 21186630
chr17 3699878 3699899 ZNF263 JASPAR yes 52806094
chr17 3699880 3699891 E2F6 JASPAR yes 21186631
chr17 3699880 3699891 E2F6 JASPAR yes 52806095
chr17 3699881 3699902 ZNF263 JASPAR yes 21186632
chr17 3699881 3699902 ZNF263 JASPAR yes 52806096
chr17 3699882 3699903 ZNF263 JASPAR yes 21186633
chr17 3699882 3699903 ZNF263 JASPAR yes 52806097
chr17 3699889 3699893 H1TF2 TRANSFAC yes 21186634
chr17 3699889 3699893 NFE TRANSFAC yes 21186635
chr17 3699889 3699893 SRF TRANSFAC yes 21186636
chr17 3699889 3699893 H1TF2 TRANSFAC yes 52806098
chr17 3699889 3699893 NFE TRANSFAC yes 52806099
chr17 3699889 3699893 SRF TRANSFAC yes 52806100
chr17 3699893 3699903 MZF1 JASPAR yes 21186637
chr17 3699893 3699903 MZF1 JASPAR yes 52806101
chr17 3699893 3699908 ZIC3 JASPAR yes 21186638
chr17 3699893 3699908 ZIC3 JASPAR yes 52806102
chr17 3699894 3699904 SP1 JASPAR yes 21186639
chr17 3699894 3699904 SP1 JASPAR yes 52806103
chr17 3699896 3699902 SP1 TRANSFAC yes 21186640
chr17 3699896 3699902 SP1 TRANSFAC yes 52806104
chr17 3699936 3699949 SMAD2 JASPAR yes 21186641
chr17 3699936 3699949 SMAD2 JASPAR yes 52806105
chr17 3699940 3699944 NFE TRANSFAC yes 21186642
chr17 3699940 3699944 NFE TRANSFAC yes 52806106
chr17 3699951 3699966 RUNX2 JASPAR yes 21186643
chr17 3699951 3699966 RUNX2 JASPAR yes 52806107
chr17 3699976 3699980 NFE TRANSFAC yes 21186644
chr17 3699976 3699980 NFE TRANSFAC yes 52806108
chr17 3699979 3699985 MZF1 JASPAR yes 21186645
chr17 3699979 3699985 MZF1 JASPAR yes 52806109
chr17 3699991 3700009 MAFF JASPAR yes 21186646
chr17 3699991 3700009 MAFF JASPAR yes 52806110
chr17 3699997 3700008 JUNB JASPAR yes 21186647
chr17 3699997 3700008 NFE2L2 JASPAR yes 21186648
chr17 3699997 3700008 JUNB JASPAR yes 52806111
chr17 3699997 3700008 NFE2L2 JASPAR yes 52806112
chr17 3699998 3700009 FOS JASPAR yes 21186649
chr17 3699998 3700009 FOSL1 JASPAR yes 21186650
chr17 3699998 3700009 JUND JASPAR yes 21186651
chr17 3699998 3700009 FOS JASPAR yes 52806113
chr17 3699998 3700009 FOSL1 JASPAR yes 52806114
chr17 3699998 3700009 JUND JASPAR yes 52806115
chr17 3699999 3700010 JUNB JASPAR yes 21186652
chr17 3699999 3700010 JUNB JASPAR yes 52806116
chr17 3699999 3700013 JUN JASPAR yes 21186653
chr17 3699999 3700013 JUN JASPAR yes 52806117
chr17 3700000 3700007 JUN TRANSFAC yes 21186654
chr17 3700000 3700007 JUN TRANSFAC yes 52806118
chr17 3700000 3700009 SMAD4 TRANSFAC yes 21186655
chr17 3700000 3700009 SMAD4 TRANSFAC yes 52806119
chr17 3700000 3700011 BATF JASPAR yes 21186656
chr17 3700000 3700011 BATF JASPAR yes 52806120
chr17 3700010 3700021 NFKB1 JASPAR yes 21186657
chr17 3700010 3700021 NFKB1 JASPAR yes 52806121
chr17 3700014 3700024 MZF1 JASPAR yes 21186658
chr17 3700014 3700024 MZF1 JASPAR yes 52806122
chr17 3700017 3700023 SP1 TRANSFAC yes 21186659
chr17 3700017 3700023 SP1 TRANSFAC yes 52806123
chr17 3700018 3700039 ZNF263 JASPAR yes 21186660
chr17 3700018 3700039 ZNF263 JASPAR yes 52806124
chr17 3700027 3700031 NFE TRANSFAC yes 21186661
chr17 3700027 3700031 NFE TRANSFAC yes 52806125
chr17 3700040 3700044 NFE TRANSFAC yes 21186662
chr17 3700040 3700044 NFE TRANSFAC yes 52806126
chr17 3700048 3700069 ZNF263 JASPAR yes 21186663
chr17 3700048 3700069 ZNF263 JASPAR yes 52806127
chr17 3700058 3700062 NFE TRANSFAC yes 21186664
chr17 3700058 3700062 NFE TRANSFAC yes 52806128
chr17 3700077 3700081 LFA1 TRANSFAC yes 21186665
chr17 3700077 3700081 LFA1 TRANSFAC yes 52806129
SNP sites on vista23760[chr17:3699697-3700093]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 3699735 rs114797837 G A
RUNX3
4708539
chr17 3699745 rs113501614 C G,T
NFIA NFIX RUNX3
4708540
chr17 3699801 rs553744398 C T
BHLHE40 RUNX3
4708541
chr17 3699961 rs114488836 G A
BATF IRF4 RUNX2 RUNX3
4708542
chr17 3700011 rs561834907 C T
BATF IRF4 JUN NFKB1 RUNX3
4708543
chr17 3700075 rs11078464 A T
BATF IRF4 RUNX3
4708544
Genes possibly regulated by vista23760[chr17:3699697-3700093]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 3575493 3599698 - P2RX5 ENSG00000083454.17 3599698 0.97 0.99 15264 1
chr17 3617922 3704537 - ITGAE ENSG00000083457.7 3704537 0.92 1.0 15265 95556
chr17 3627211 3630067 + GSG2 ENSG00000177602.4 3627211 0.95 0.99 15266 27514
chr17 3714460 3749545 - C17orf85 ENSG00000074356.12 3749545 0.77 0.99 15267 50548
chr17 3763609 3798185 - CAMKK1 ENSG00000004660.10 3798185 0.81 1.0 15268 1908
Expression level of Genes
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miRNAs possibly regulated by vista23760[chr17:3699697-3700093]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results