EnhancerDB
  1. Home
  2. Enhancers
  3. vista2377[chr1:89916658-89916807]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2377[chr1:89916658-89916807]
Back to top
Tissue distribution of vista2377
Back to top
Transcription factor that possibly regulate vista2377[chr1:89916658-89916807]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 89916633 89916928 RUNX3 UCSC Txn Factor no Conserved 107813578
chr1 89916661 89916674 POU2F2 JASPAR yes 30597618
chr1 89916661 89916674 POU2F2 JASPAR yes 118324917
chr1 89916661 89916682 IRF1 JASPAR yes 30597619
chr1 89916661 89916682 IRF1 JASPAR yes 118324918
chr1 89916665 89916680 STAT2 JASPAR yes 30597620
chr1 89916665 89916680 STAT2 JASPAR yes 118324919
chr1 89916671 89916686 HSF1 JASPAR yes 30597621
chr1 89916671 89916686 HSF1 JASPAR yes 118324920
chr1 89916683 89916688 ETS2 TRANSFAC yes 30597622
chr1 89916683 89916688 ETS2 TRANSFAC yes 118324921
chr1 89916683 89916691 FEV JASPAR yes 30597623
chr1 89916683 89916691 FEV JASPAR yes 118324922
chr1 89916714 89916726 PBX1 JASPAR yes 30597624
chr1 89916714 89916726 PBX1 JASPAR yes 118324923
chr1 89916730 89916739 JDP2 JASPAR yes 30597625
chr1 89916730 89916739 JDP2 JASPAR yes 118324924
chr1 89916739 89916749 EMX1 JASPAR yes 30597626
chr1 89916739 89916749 HOXB3 JASPAR yes 30597627
chr1 89916739 89916749 EMX1 JASPAR yes 118324925
chr1 89916739 89916749 HOXB3 JASPAR yes 118324926
chr1 89916741 89916752 FOSL2 JASPAR yes 30597628
chr1 89916741 89916752 JUNB JASPAR yes 30597629
chr1 89916741 89916752 FOSL2 JASPAR yes 118324927
chr1 89916741 89916752 JUNB JASPAR yes 118324928
chr1 89916742 89916753 FOS JASPAR yes 30597630
chr1 89916742 89916753 FOSL1 JASPAR yes 30597631
chr1 89916742 89916753 JUND JASPAR yes 30597632
chr1 89916742 89916753 FOS JASPAR yes 118324929
chr1 89916742 89916753 FOSL1 JASPAR yes 118324930
chr1 89916742 89916753 JUND JASPAR yes 118324931
chr1 89916743 89916752 JDP2 JASPAR yes 30597633
chr1 89916743 89916752 JDP2 JASPAR yes 118324932
chr1 89916760 89916775 RUNX2 JASPAR yes 30597634
chr1 89916760 89916775 RUNX2 JASPAR yes 118324933
chr1 89916763 89916774 RUNX1 JASPAR yes 30597635
chr1 89916763 89916774 RUNX1 JASPAR yes 118324934
chr1 89916763 89916775 GLI2 JASPAR yes 30597636
chr1 89916763 89916775 GLI2 JASPAR yes 118324935
chr1 89916764 89916774 RUNX3 JASPAR yes 30597637
chr1 89916764 89916774 RUNX3 JASPAR yes 118324936
chr1 89916765 89916774 RUNX2 JASPAR yes 30597638
chr1 89916765 89916774 RUNX2 JASPAR yes 118324937
chr1 89916782 89916785 MYB TRANSFAC yes 30597639
chr1 89916782 89916785 MYB TRANSFAC yes 118324938
chr1 89916785 89916789 YY1 TRANSFAC yes 30597640
chr1 89916785 89916789 YY1 TRANSFAC yes 118324939
SNP sites on vista2377[chr1:89916658-89916807]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 89916755 rs115392247 C A
RUNX3
469161
chr1 89916800 rs116753466 C G
RUNX3
469162
Genes possibly regulated by vista2377[chr1:89916658-89916807]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 89829617 89852020 + GBP6 ENSG00000183347.13 89829617 1.0 0.96 880 12959
chr1 89990395 90063423 + LRRC8B ENSG00000197147.8 89990395 0.78 0.99 881 26412
Expression level of Genes
Back to top
miRNAs possibly regulated by vista2377[chr1:89916658-89916807]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results