EnhancerDB
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  3. vista23779[chr17:4278382-4278689]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23779[chr17:4278382-4278689]
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Tissue distribution of vista23779
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Transcription factor that possibly regulate vista23779[chr17:4278382-4278689]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 4278278 4279123 RUNX3 UCSC Txn Factor no Conserved 108232281
chr17 4278288 4279095 NFIC UCSC Txn Factor no Conserved 108232283
chr17 4278295 4279089 IKZF1 UCSC Txn Factor no Conserved 108232286
chr17 4278335 4278745 TBL1XR1 UCSC Txn Factor no Conserved 108232290
chr17 4278346 4278790 FOXM1 UCSC Txn Factor no Conserved 108232294
chr17 4278348 4278837 MTA3 UCSC Txn Factor no Conserved 108232296
chr17 4278378 4278720 BCL11A UCSC Txn Factor no Conserved 108232305
chr17 4278385 4278778 ATF2 UCSC Txn Factor no Conserved 108232308
chr17 4278388 4278756 NFATC1 UCSC Txn Factor no Conserved 108232310
chr17 4278421 4278737 BATF UCSC Txn Factor no Conserved 108232318
chr17 4278383 4278397 SPI1 JASPAR yes 21187445
chr17 4278383 4278397 SPI1 JASPAR yes 52832494
chr17 4278385 4278397 EHF JASPAR yes 21187446
chr17 4278385 4278397 ELF4 JASPAR yes 21187447
chr17 4278385 4278397 EHF JASPAR yes 52832495
chr17 4278385 4278397 ELF4 JASPAR yes 52832496
chr17 4278385 4278398 ELF3 JASPAR yes 21187448
chr17 4278385 4278398 ELF3 JASPAR yes 52832497
chr17 4278386 4278397 ELF5 JASPAR yes 21187449
chr17 4278386 4278397 ELF5 JASPAR yes 52832498
chr17 4278389 4278394 ETS2 TRANSFAC yes 21187450
chr17 4278389 4278394 ETS2 TRANSFAC yes 52832499
chr17 4278393 4278411 MAFF JASPAR yes 21187451
chr17 4278393 4278411 MAFF JASPAR yes 52832500
chr17 4278395 4278406 NRL JASPAR yes 21187452
chr17 4278395 4278406 NRL JASPAR yes 52832501
chr17 4278395 4278410 MAFK JASPAR yes 21187453
chr17 4278395 4278410 MAFK JASPAR yes 52832502
chr17 4278398 4278411 NR2F1 JASPAR yes 21187454
chr17 4278398 4278411 NR2F1 JASPAR yes 52832503
chr17 4278400 4278411 ESRRA JASPAR yes 21187455
chr17 4278400 4278411 ESRRA JASPAR yes 52832504
chr17 4278402 4278412 RORA JASPAR yes 21187456
chr17 4278402 4278412 RORA JASPAR yes 52832505
chr17 4278409 4278430 ZNF263 JASPAR yes 21187457
chr17 4278409 4278430 ZNF263 JASPAR yes 52832506
chr17 4278413 4278420 PEA3 TRANSFAC yes 21187458
chr17 4278413 4278420 PEA3 TRANSFAC yes 52832507
chr17 4278435 4278447 PKNOX1 JASPAR yes 21187459
chr17 4278435 4278447 PKNOX2 JASPAR yes 21187460
chr17 4278435 4278447 TGIF1 JASPAR yes 21187461
chr17 4278435 4278447 TGIF2 JASPAR yes 21187462
chr17 4278435 4278447 PKNOX1 JASPAR yes 52832508
chr17 4278435 4278447 PKNOX2 JASPAR yes 52832509
chr17 4278435 4278447 TGIF1 JASPAR yes 52832510
chr17 4278435 4278447 TGIF2 JASPAR yes 52832511
chr17 4278441 4278445 NFE TRANSFAC yes 21187463
chr17 4278441 4278445 NFE TRANSFAC yes 52832512
chr17 4278463 4278480 RARA JASPAR yes 21187464
chr17 4278463 4278480 RXRA JASPAR yes 21187465
chr17 4278463 4278480 RARA JASPAR yes 52832513
chr17 4278463 4278480 RXRA JASPAR yes 52832514
chr17 4278469 4278490 ZNF263 JASPAR yes 21187466
chr17 4278469 4278490 ZNF263 JASPAR yes 52832515
chr17 4278475 4278479 LFA1 TRANSFAC yes 21187467
chr17 4278475 4278479 LFA1 TRANSFAC yes 52832516
chr17 4278482 4278500 RARA JASPAR yes 21187468
chr17 4278482 4278500 RARA JASPAR yes 52832517
chr17 4278507 4278522 RUNX2 JASPAR yes 21187469
chr17 4278507 4278522 RUNX2 JASPAR yes 52832518
chr17 4278509 4278513 YY1 TRANSFAC yes 21187470
chr17 4278509 4278513 YY1 TRANSFAC yes 52832519
chr17 4278510 4278521 RUNX1 JASPAR yes 21187471
chr17 4278510 4278521 RUNX1 JASPAR yes 52832520
chr17 4278514 4278529 RUNX2 JASPAR yes 21187472
chr17 4278514 4278529 RUNX2 JASPAR yes 52832521
chr17 4278517 4278528 RUNX1 JASPAR yes 21187473
chr17 4278517 4278528 RUNX1 JASPAR yes 52832522
chr17 4278518 4278528 RUNX3 JASPAR yes 21187474
chr17 4278518 4278528 RUNX3 JASPAR yes 52832523
chr17 4278523 4278527 ESR1 TRANSFAC yes 21187475
chr17 4278523 4278527 ESR1 TRANSFAC yes 52832524
chr17 4278527 4278542 STAT2 JASPAR yes 21187476
chr17 4278527 4278542 STAT2 JASPAR yes 52832525
chr17 4278529 4278550 IRF1 JASPAR yes 21187477
chr17 4278529 4278550 IRF1 JASPAR yes 52832526
chr17 4278531 4278546 IRF9 JASPAR yes 21187478
chr17 4278531 4278546 IRF9 JASPAR yes 52832527
chr17 4278532 4278546 IRF7 JASPAR yes 21187479
chr17 4278532 4278546 IRF7 JASPAR yes 52832528
chr17 4278533 4278551 IRF2 JASPAR yes 21187480
chr17 4278533 4278551 IRF2 JASPAR yes 52832529
chr17 4278539 4278554 SCRT1 JASPAR yes 21187481
chr17 4278539 4278554 SCRT1 JASPAR yes 52832530
chr17 4278549 4278566 RARA JASPAR yes 21187482
chr17 4278549 4278566 RARA JASPAR yes 52832531
chr17 4278550 4278554 H4TF2 TRANSFAC yes 21187483
chr17 4278550 4278554 H4TF2 TRANSFAC yes 52832532
chr17 4278554 4278559 MYC TRANSFAC yes 21187484
chr17 4278554 4278559 MYC TRANSFAC yes 52832533
chr17 4278570 4278574 YY1 TRANSFAC yes 21187485
chr17 4278570 4278574 YY1 TRANSFAC yes 52832534
chr17 4278576 4278586 NFATC3 JASPAR yes 21187486
chr17 4278576 4278586 NFATC3 JASPAR yes 52832535
chr17 4278576 4278591 STAT1 JASPAR yes 21187487
chr17 4278576 4278591 STAT1 JASPAR yes 52832536
chr17 4278577 4278584 NFATC2 JASPAR yes 21187488
chr17 4278577 4278584 NFATC2 JASPAR yes 52832537
chr17 4278578 4278589 STAT1 JASPAR yes 21187489
chr17 4278578 4278589 STAT1 JASPAR yes 52832538
chr17 4278592 4278597 MYC TRANSFAC yes 21187490
chr17 4278592 4278597 MYC TRANSFAC yes 52832539
chr17 4278629 4278643 PAX6 JASPAR yes 21187491
chr17 4278629 4278643 PAX6 JASPAR yes 52832540
chr17 4278641 4278660 PAX5 JASPAR yes 21187492
chr17 4278641 4278660 PAX5 JASPAR yes 52832541
chr17 4278654 4278675 IRF1 JASPAR yes 21187493
chr17 4278654 4278675 IRF1 JASPAR yes 52832542
chr17 4278669 4278680 E2F6 JASPAR yes 21187494
chr17 4278669 4278680 E2F6 JASPAR yes 52832543
chr17 4278678 4278696 MAFF JASPAR yes 21187495
chr17 4278678 4278696 MAFF JASPAR yes 52832544
chr17 4278680 4278692 NHLH1 JASPAR yes 21187496
chr17 4278680 4278692 NHLH1 JASPAR yes 52832545
chr17 4278680 4278695 MAFK JASPAR yes 21187497
chr17 4278680 4278695 MAFK JASPAR yes 52832546
chr17 4278681 4278691 MSC JASPAR yes 21187498
chr17 4278681 4278691 NHLH1 JASPAR yes 21187499
chr17 4278681 4278691 TFAP4 JASPAR yes 21187500
chr17 4278681 4278691 MSC JASPAR yes 52832547
chr17 4278681 4278691 NHLH1 JASPAR yes 52832548
chr17 4278681 4278691 TFAP4 JASPAR yes 52832549
SNP sites on vista23779[chr17:4278382-4278689]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 4278431 rs148873354 A C
ATF2 BATF BCL11A FOXM1 IKZF1 MTA3 NFATC1 NFIC RUNX3 TBL1XR1
4711675
chr17 4278511 rs137922913 A T
ATF2 BATF BCL11A FOXM1 IKZF1 MTA3 NFATC1 NFIC RUNX1 RUNX2 RUNX3 TBL1XR1 YY1
4711676
chr17 4278520 rs142461379 T C
ATF2 BATF BCL11A FOXM1 IKZF1 MTA3 NFATC1 NFIC RUNX1 RUNX2 RUNX3 TBL1XR1
4711677
chr17 4278527 rs188403935 C G
ATF2 BATF BCL11A ESR1 FOXM1 IKZF1 MTA3 NFATC1 NFIC RUNX1 RUNX2 RUNX3 STAT2 TBL1XR1
4711678
chr17 4278613 rs115592018 T C
ATF2 BATF BCL11A FOXM1 IKZF1 MTA3 NFATC1 NFIC RUNX3 TBL1XR1
4711679
chr17 4278664 rs7215974 C T
ATF2 BATF BCL11A FOXM1 IKZF1 IRF1 MTA3 NFATC1 NFIC RUNX3 TBL1XR1
4711680
Genes possibly regulated by vista23779[chr17:4278382-4278689]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 4172554 4269923 - UBE2G1 ENSG00000132388.8 4269923 0.78 0.99 15274 91541
chr17 4336983 4391503 + SPNS3 ENSG00000182557.3 4336983 0.93 1.0 15275 41706
Expression level of Genes
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miRNAs possibly regulated by vista23779[chr17:4278382-4278689]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results