EnhancerDB
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  3. vista23789[chr17:4437372-4437692]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23789[chr17:4437372-4437692]
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Tissue distribution of vista23789
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Transcription factor that possibly regulate vista23789[chr17:4437372-4437692]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 4437289 4437980 ZNF263 UCSC Txn Factor no Conserved 108232478
chr17 4437372 4437382 MZF1 JASPAR yes 21187892
chr17 4437373 4437388 NR2C2 JASPAR yes 21187893
chr17 4437375 4437384 SP1 TRANSFAC yes 21187894
chr17 4437375 4437385 SP1 JASPAR yes 21187895
chr17 4437376 4437386 SP1 JASPAR yes 21187896
chr17 4437377 4437383 MAZ TRANSFAC yes 21187897
chr17 4437383 4437387 LFA1 TRANSFAC yes 21187898
chr17 4437421 4437434 SMAD2 JASPAR yes 21187899
chr17 4437452 4437461 THAP1 JASPAR yes 21187900
chr17 4437454 4437461 SP1 TRANSFAC yes 21187901
chr17 4437456 4437461 SP1 TRANSFAC yes 21187902
chr17 4437461 4437471 SP1 JASPAR yes 21187903
chr17 4437464 4437478 ZIC1 JASPAR yes 21187904
chr17 4437464 4437479 ZIC4 JASPAR yes 21187905
chr17 4437527 4437542 TFAP2C JASPAR yes 21187906
chr17 4437528 4437539 TFAP2A JASPAR yes 21187907
chr17 4437528 4437539 TFAP2B JASPAR yes 21187908
chr17 4437528 4437539 TFAP2C JASPAR yes 21187909
chr17 4437545 4437550 SP1 TRANSFAC yes 21187910
chr17 4437558 4437562 NFE TRANSFAC yes 21187911
chr17 4437567 4437578 FOXA1 JASPAR yes 21187912
chr17 4437573 4437582 SOX9 JASPAR yes 21187913
chr17 4437591 4437610 CTCF JASPAR yes 21187914
chr17 4437599 4437604 TFAP2A TRANSFAC yes 21187915
chr17 4437599 4437605 MZF1 JASPAR yes 21187916
chr17 4437599 4437614 HNF4G JASPAR yes 21187917
chr17 4437600 4437615 HNF4A JASPAR yes 21187918
chr17 4437604 4437610 SOX10 JASPAR yes 21187919
chr17 4437612 4437616 NFE TRANSFAC yes 21187920
chr17 4437622 4437641 CTCF JASPAR yes 21187921
chr17 4437622 4437642 TP63 JASPAR yes 21187922
chr17 4437647 4437652 SP1 TRANSFAC yes 21187923
chr17 4437649 4437654 TFAP2A TRANSFAC yes 21187924
chr17 4437649 4437655 MZF1 JASPAR yes 21187925
chr17 4437656 4437672 ZNF143 JASPAR yes 21187926
chr17 4437668 4437689 ZNF263 JASPAR yes 21187927
SNP sites on vista23789[chr17:4437372-4437692]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 4437448 rs547903885 G A,C
ZNF263
4713719
chr17 4437458 rs114110265 C T
SP1 THAP1 ZNF263
4713720
chr17 4437472 rs549616511 C G,T
ZIC1 ZIC4 ZNF263
4713721
chr17 4437477 rs58472777 G C
ZIC1 ZIC4 ZNF263
4713722
chr17 4437535 rs200905138 C CGGCTGG
TFAP2A TFAP2B TFAP2C ZNF263
4713723
chr17 4437567 rs78555253 A T
FOXA1 ZNF263
4713724
chr17 4437592 rs139545659 C T
CTCF ZNF263
4713725
chr17 4437629 rs149722380 G A
CTCF TP63 ZNF263
4713726
chr17 4437655 rs577155377 ATGGGAGCACCC A
MZF1 ZNF263
4713727
Genes possibly regulated by vista23789[chr17:4437372-4437692]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 4402133 4442330 + SPNS2 ENSG00000183018.4 4402133 0.84 1.0 15276 64761
chr17 4442192 4458926 - MYBBP1A ENSG00000132382.10 4458926 0.73 1.0 15277 78766
chr17 4460222 4464113 - GGT6 ENSG00000167741.6 4464113 0.87 0.98 15278 73579
chr17 4487294 4511614 + SMTNL2 ENSG00000188176.7 4487294 0.97 1.0 15279 50398
Expression level of Genes
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miRNAs possibly regulated by vista23789[chr17:4437372-4437692]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results