EnhancerDB
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  3. vista2380[chr1:90032556-90032702]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2380[chr1:90032556-90032702]
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Tissue distribution of vista2380
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Transcription factor that possibly regulate vista2380[chr1:90032556-90032702]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90032450 90032774 CEBPB UCSC Txn Factor no Conserved 107813589
chr1 90032559 90032567 EHF JASPAR yes 30604778
chr1 90032559 90032567 EHF JASPAR yes 118324990
chr1 90032561 90032568 SPIB JASPAR yes 30604779
chr1 90032561 90032568 SPIB JASPAR yes 118324991
chr1 90032563 90032574 EBF1 JASPAR yes 30604780
chr1 90032563 90032574 EBF1 JASPAR yes 118324992
chr1 90032583 90032595 INSM1 JASPAR yes 30604781
chr1 90032583 90032595 INSM1 JASPAR yes 118324993
chr1 90032602 90032614 DBP JASPAR yes 30604782
chr1 90032602 90032614 HLF JASPAR yes 30604783
chr1 90032602 90032614 TEF JASPAR yes 30604784
chr1 90032602 90032614 DBP JASPAR yes 118324994
chr1 90032602 90032614 HLF JASPAR yes 118324995
chr1 90032602 90032614 TEF JASPAR yes 118324996
chr1 90032603 90032613 CEBPB JASPAR yes 30604785
chr1 90032603 90032613 CEBPD JASPAR yes 30604786
chr1 90032603 90032613 CEBPE JASPAR yes 30604787
chr1 90032603 90032613 CEBPG JASPAR yes 30604788
chr1 90032603 90032613 CEBPB JASPAR yes 118324997
chr1 90032603 90032613 CEBPD JASPAR yes 118324998
chr1 90032603 90032613 CEBPE JASPAR yes 118324999
chr1 90032603 90032613 CEBPG JASPAR yes 118325000
chr1 90032604 90032612 NF-IL6 TRANSFAC yes 30604789
chr1 90032604 90032612 NF-IL6 TRANSFAC yes 118325001
chr1 90032609 90032612 MYB TRANSFAC yes 30604790
chr1 90032609 90032612 MYB TRANSFAC yes 118325002
chr1 90032613 90032623 EMX1 JASPAR yes 30604791
chr1 90032613 90032623 EVX1 JASPAR yes 30604792
chr1 90032613 90032623 EVX2 JASPAR yes 30604793
chr1 90032613 90032623 HOXA2 JASPAR yes 30604794
chr1 90032613 90032623 HOXB2 JASPAR yes 30604795
chr1 90032613 90032623 HOXB3 JASPAR yes 30604796
chr1 90032613 90032623 NOTO JASPAR yes 30604797
chr1 90032613 90032623 EMX1 JASPAR yes 118325003
chr1 90032613 90032623 EVX1 JASPAR yes 118325004
chr1 90032613 90032623 EVX2 JASPAR yes 118325005
chr1 90032613 90032623 HOXA2 JASPAR yes 118325006
chr1 90032613 90032623 HOXB2 JASPAR yes 118325007
chr1 90032613 90032623 HOXB3 JASPAR yes 118325008
chr1 90032613 90032623 NOTO JASPAR yes 118325009
chr1 90032614 90032628 POU1F1 JASPAR yes 30604798
chr1 90032614 90032628 POU1F1 JASPAR yes 118325010
chr1 90032615 90032627 POU3F1 JASPAR yes 30604799
chr1 90032615 90032627 POU3F2 JASPAR yes 30604800
chr1 90032615 90032627 POU3F1 JASPAR yes 118325011
chr1 90032615 90032627 POU3F2 JASPAR yes 118325012
chr1 90032615 90032628 POU3F3 JASPAR yes 30604801
chr1 90032615 90032628 POU3F3 JASPAR yes 118325013
chr1 90032616 90032620 YY1 TRANSFAC yes 30604802
chr1 90032616 90032620 YY1 TRANSFAC yes 118325014
chr1 90032616 90032628 POU2F1 JASPAR yes 30604803
chr1 90032616 90032628 POU2F1 JASPAR yes 118325015
chr1 90032616 90032632 RFX5 JASPAR yes 30604804
chr1 90032616 90032632 RFX5 JASPAR yes 118325016
chr1 90032617 90032626 POU3F4 JASPAR yes 30604805
chr1 90032617 90032626 POU5F1B JASPAR yes 30604806
chr1 90032617 90032626 POU3F4 JASPAR yes 118325017
chr1 90032617 90032626 POU5F1B JASPAR yes 118325018
chr1 90032635 90032653 MAFF JASPAR yes 30604807
chr1 90032635 90032653 MAFF JASPAR yes 118325019
chr1 90032637 90032648 NRL JASPAR yes 30604808
chr1 90032637 90032648 NRL JASPAR yes 118325020
chr1 90032639 90032651 CREB1 JASPAR yes 30604809
chr1 90032639 90032651 CREB1 JASPAR yes 118325021
chr1 90032663 90032675 NHLH1 JASPAR yes 30604810
chr1 90032663 90032675 NHLH1 JASPAR yes 118325022
chr1 90032664 90032674 NHLH1 JASPAR yes 30604811
chr1 90032664 90032674 NHLH1 JASPAR yes 118325023
chr1 90032676 90032680 ESR1 TRANSFAC yes 30604812
chr1 90032676 90032680 ESR1 TRANSFAC yes 118325024
chr1 90032688 90032697 SRY JASPAR yes 30604813
chr1 90032688 90032697 SRY JASPAR yes 118325025
chr1 90032690 90032693 MYB TRANSFAC yes 30604814
chr1 90032690 90032693 MYB TRANSFAC yes 118325026
chr1 90032697 90032703 SOX10 JASPAR yes 30604815
chr1 90032697 90032703 SOX10 JASPAR yes 118325027
chr1 90032698 90032712 SPIC JASPAR yes 30604816
chr1 90032698 90032712 SPIC JASPAR yes 118325028
SNP sites on vista2380[chr1:90032556-90032702]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90032569 rs71709951 GGA G
CEBPB EBF1
469784
chr1 90032569 rs868323450 GGA G
CEBPB EBF1
469785
chr1 90032656 rs181053633 G A
CEBPB
469786
Genes possibly regulated by vista2380[chr1:90032556-90032702]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 89990395 90063423 + LRRC8B ENSG00000197147.8 89990395 0.78 0.99 881 57839
chr1 90098631 90235462 + LRRC8C ENSG00000171488.10 90098631 0.84 0.99 882 34071
chr1 90098699 90398809 + RP11-302M6.4 ENSG00000271949.1 90098699 1.0 1.0 883 34003
Expression level of Genes
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miRNAs possibly regulated by vista2380[chr1:90032556-90032702]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results