EnhancerDB
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  3. vista23817[chr17:5140050-5140412]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23817[chr17:5140050-5140412]
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Tissue distribution of vista23817
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Transcription factor that possibly regulate vista23817[chr17:5140050-5140412]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 5140051 5140057 ZNF354C JASPAR yes 21189176
chr17 5140053 5140058 GATA2 JASPAR yes 21189177
chr17 5140073 5140076 MYB TRANSFAC yes 21189178
chr17 5140075 5140081 SOX10 JASPAR yes 21189179
chr17 5140082 5140102 RREB1 JASPAR yes 21189180
chr17 5140117 5140131 POU4F1 JASPAR yes 21189181
chr17 5140121 5140136 HNF1A JASPAR yes 21189182
chr17 5140122 5140132 CEBPB JASPAR yes 21189183
chr17 5140122 5140132 CEBPG JASPAR yes 21189184
chr17 5140126 5140140 POU4F1 JASPAR yes 21189185
chr17 5140129 5140143 POU4F1 JASPAR yes 21189186
chr17 5140136 5140140 YY1 TRANSFAC yes 21189187
chr17 5140144 5140147 MYB TRANSFAC yes 21189188
chr17 5140163 5140173 TFAP4 JASPAR yes 21189189
chr17 5140193 5140208 MEF2A JASPAR yes 21189190
chr17 5140194 5140209 MEF2C JASPAR yes 21189191
chr17 5140197 5140201 YY1 TRANSFAC yes 21189192
chr17 5140203 5140206 MYB TRANSFAC yes 21189193
chr17 5140222 5140237 TP53 JASPAR yes 21189194
chr17 5140227 5140241 PAX6 JASPAR yes 21189195
chr17 5140237 5140245 TBX15 JASPAR yes 21189196
chr17 5140237 5140245 TBX1 JASPAR yes 21189197
chr17 5140237 5140245 TBX4 JASPAR yes 21189198
chr17 5140237 5140245 TBX5 JASPAR yes 21189199
chr17 5140241 5140251 SREBF1 JASPAR yes 21189200
chr17 5140241 5140251 SREBF2 JASPAR yes 21189201
chr17 5140241 5140251 TFEB JASPAR yes 21189202
chr17 5140241 5140252 USF1 JASPAR yes 21189203
chr17 5140241 5140252 USF2 JASPAR yes 21189204
chr17 5140282 5140288 SOX10 JASPAR yes 21189205
chr17 5140292 5140313 ZNF263 JASPAR yes 21189206
chr17 5140315 5140320 ETS2 TRANSFAC yes 21189207
chr17 5140320 5140331 HOXC11 JASPAR yes 21189208
chr17 5140320 5140331 HOXC12 JASPAR yes 21189209
chr17 5140321 5140331 HOXD11 JASPAR yes 21189210
chr17 5140323 5140337 IRF7 JASPAR yes 21189211
chr17 5140324 5140339 STAT2 JASPAR yes 21189212
chr17 5140329 5140335 TCF4 TRANSFAC yes 21189213
chr17 5140352 5140358 TCF4 TRANSFAC yes 21189214
chr17 5140356 5140371 TFAP2C JASPAR yes 21189215
chr17 5140359 5140370 EBF1 JASPAR yes 21189216
chr17 5140374 5140380 YY1 JASPAR yes 21189217
chr17 5140383 5140398 HSF1 JASPAR yes 21189218
chr17 5140388 5140398 NFKB1 JASPAR yes 21189219
SNP sites on vista23817[chr17:5140050-5140412]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 5140177 rs75541534 T C no 4718094
chr17 5140267 rs563661111 G A no 4718095
chr17 5140356 rs184275469 A G
TCF4 TFAP2C
4718096
chr17 5140385 rs2641244 T C
HSF1
4718097
chr17 5140399 rs4456560 G T no 4718098
Genes possibly regulated by vista23817[chr17:5140050-5140412]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 5082831 5095178 - ZNF594 ENSG00000180626.9 5095178 0.79 0.97 15307 55128
chr17 5112256 5138155 - SCIMP ENSG00000161929.10 5138155 0.95 1.0 15308 98105
chr17 5185558 5289129 + RABEP1 ENSG00000029725.12 5185558 0.61 0.99 15309 54854
Expression level of Genes
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miRNAs possibly regulated by vista23817[chr17:5140050-5140412]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results