EnhancerDB
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  3. vista23818[chr17:5243236-5243614]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23818[chr17:5243236-5243614]
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Tissue distribution of vista23818
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Transcription factor that possibly regulate vista23818[chr17:5243236-5243614]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 5243241 5243245 NFE TRANSFAC yes 21189220
chr17 5243241 5243246 GATA1 TRANSFAC yes 21189221
chr17 5243241 5243247 GATA3 JASPAR yes 21189222
chr17 5243244 5243255 FOXH1 JASPAR yes 21189223
chr17 5243245 5243255 HOXA13 JASPAR yes 21189224
chr17 5243245 5243255 HOXB13 JASPAR yes 21189225
chr17 5243245 5243255 HOXD13 JASPAR yes 21189226
chr17 5243246 5243257 FOXP2 JASPAR yes 21189227
chr17 5243257 5243267 CUX1 JASPAR yes 21189228
chr17 5243257 5243267 CUX2 JASPAR yes 21189229
chr17 5243269 5243273 TEAD2 TRANSFAC yes 21189230
chr17 5243278 5243289 ESRRB JASPAR yes 21189231
chr17 5243280 5243297 RARA JASPAR yes 21189232
chr17 5243309 5243322 POU2F2 JASPAR yes 21189233
chr17 5243316 5243327 PHOX2A JASPAR yes 21189234
chr17 5243335 5243350 PRDM1 JASPAR yes 21189235
chr17 5243337 5243355 ESR2 JASPAR yes 21189236
chr17 5243375 5243388 NR2F1 JASPAR yes 21189237
chr17 5243377 5243388 ESRRA JASPAR yes 21189238
chr17 5243377 5243388 ESRRB JASPAR yes 21189239
chr17 5243378 5243386 NR4A2 JASPAR yes 21189240
chr17 5243379 5243389 RORA JASPAR yes 21189241
chr17 5243427 5243431 YY1 TRANSFAC yes 21189242
chr17 5243435 5243450 IRF9 JASPAR yes 21189243
chr17 5243436 5243440 NFE TRANSFAC yes 21189244
chr17 5243446 5243458 FOXI1 JASPAR yes 21189245
chr17 5243449 5243453 YY1 TRANSFAC yes 21189246
chr17 5243480 5243485 GATA2 JASPAR yes 21189247
chr17 5243511 5243528 ZNF410 JASPAR yes 21189248
chr17 5243521 5243531 HMBOX1 JASPAR yes 21189249
chr17 5243529 5243544 MAFK JASPAR yes 21189250
chr17 5243533 5243544 NRL JASPAR yes 21189251
chr17 5243538 5243542 YY1 TRANSFAC yes 21189252
chr17 5243543 5243559 RFX4 JASPAR yes 21189253
chr17 5243561 5243565 LFA1 TRANSFAC yes 21189254
chr17 5243564 5243580 POU4F2 JASPAR yes 21189255
chr17 5243564 5243580 POU4F3 JASPAR yes 21189256
chr17 5243566 5243580 POU4F1 JASPAR yes 21189257
chr17 5243568 5243575 NKX3-1 JASPAR yes 21189258
chr17 5243574 5243589 AR JASPAR yes 21189259
chr17 5243582 5243597 LEF1 JASPAR yes 21189260
chr17 5243583 5243597 TCF7L2 JASPAR yes 21189261
chr17 5243585 5243597 IRF1 JASPAR yes 21189262
chr17 5243586 5243592 LEF1 TRANSFAC yes 21189263
chr17 5243586 5243592 TCF4 TRANSFAC yes 21189264
SNP sites on vista23818[chr17:5243236-5243614]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 5243269 rs77157661 A T
TEAD2
4718694
chr17 5243294 rs536050637 A G,T
RARA
4718695
chr17 5243439 rs75672693 A C
IRF9 NFE
4718696
chr17 5243462 rs78650284 A G no 4718697
chr17 5243473 rs148578997 G C no 4718698
Genes possibly regulated by vista23818[chr17:5243236-5243614]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 5185558 5289129 + RABEP1 ENSG00000029725.12 5185558 0.61 0.99 15309 42322
chr17 5264258 5323480 - NUP88 ENSG00000108559.7 5323480 0.8 1.0 15310 20134
chr17 5322961 5336196 + RPAIN ENSG00000129197.10 5322961 0.69 1.0 15311 20653
Expression level of Genes
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miRNAs possibly regulated by vista23818[chr17:5243236-5243614]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results