EnhancerDB
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  3. vista23820[chr17:5412379-5412497]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23820[chr17:5412379-5412497]
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Tissue distribution of vista23820
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Transcription factor that possibly regulate vista23820[chr17:5412379-5412497]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 5412378 5412393 RFX5 JASPAR yes 21189315
chr17 5412378 5412393 RFX5 JASPAR yes 52874358
chr17 5412398 5412401 MYB TRANSFAC yes 21189316
chr17 5412398 5412401 MYB TRANSFAC yes 52874359
chr17 5412399 5412409 MYF6 JASPAR yes 21189317
chr17 5412399 5412409 MYF6 JASPAR yes 52874360
chr17 5412401 5412420 RFX2 JASPAR yes 21189318
chr17 5412401 5412420 RFX2 JASPAR yes 52874361
chr17 5412403 5412418 RFX5 JASPAR yes 21189319
chr17 5412403 5412418 RFX5 JASPAR yes 52874362
chr17 5412404 5412409 MYC TRANSFAC yes 21189320
chr17 5412404 5412409 MYC TRANSFAC yes 52874363
chr17 5412404 5412421 BCL6B JASPAR yes 21189321
chr17 5412404 5412421 BCL6B JASPAR yes 52874364
chr17 5412405 5412420 STAT1 JASPAR yes 21189322
chr17 5412405 5412420 STAT1 JASPAR yes 52874365
chr17 5412407 5412418 STAT1 JASPAR yes 21189323
chr17 5412407 5412418 STAT3 JASPAR yes 21189324
chr17 5412407 5412418 STAT1 JASPAR yes 52874366
chr17 5412407 5412418 STAT3 JASPAR yes 52874367
chr17 5412442 5412446 H1TF2 TRANSFAC yes 21189325
chr17 5412442 5412446 NFE TRANSFAC yes 21189326
chr17 5412442 5412446 SRF TRANSFAC yes 21189327
chr17 5412442 5412446 H1TF2 TRANSFAC yes 52874368
chr17 5412442 5412446 NFE TRANSFAC yes 52874369
chr17 5412442 5412446 SRF TRANSFAC yes 52874370
chr17 5412442 5412448 NFYC TRANSFAC yes 21189328
chr17 5412442 5412448 NFYC TRANSFAC yes 52874371
SNP sites on vista23820[chr17:5412379-5412497]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 5412473 rs8079727 A C,T no 4718863
chr17 5412477 rs146181309 C T no 4718864
chr17 5412490 rs189485366 C T no 4718865
Genes possibly regulated by vista23820[chr17:5412379-5412497]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 5264258 5323480 - NUP88 ENSG00000108559.7 5323480 0.8 1.0 15310 11101
chr17 5322961 5336196 + RPAIN ENSG00000129197.10 5322961 0.69 1.0 15311 10582
chr17 5336097 5352150 - C1QBP ENSG00000108561.4 5352150 0.89 0.99 15312 39771
chr17 5344232 5372380 - DHX33 ENSG00000005100.8 5372380 0.62 0.99 15313 60001
chr17 5374571 5390131 - DERL2 ENSG00000072849.6 5390131 0.77 0.99 15314 77752
chr17 5389605 5394134 + MIS12 ENSG00000167842.11 5389605 0.66 0.99 15315 77226
Expression level of Genes
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miRNAs possibly regulated by vista23820[chr17:5412379-5412497]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results