EnhancerDB
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  3. vista23825[chr17:5623535-5623758]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23825[chr17:5623535-5623758]
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Tissue distribution of vista23825
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Transcription factor that possibly regulate vista23825[chr17:5623535-5623758]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 5623538 5623544 YY1 JASPAR yes 21189515
chr17 5623549 5623553 ESR1 TRANSFAC yes 21189516
chr17 5623550 5623562 HNF1B JASPAR yes 21189517
chr17 5623604 5623608 YY1 TRANSFAC yes 21189518
chr17 5623619 5623635 SOX8 JASPAR yes 21189519
chr17 5623637 5623641 YY1 TRANSFAC yes 21189520
chr17 5623652 5623656 YY1 TRANSFAC yes 21189521
chr17 5623655 5623661 TCF4 TRANSFAC yes 21189522
chr17 5623657 5623676 RFX2 JASPAR yes 21189523
chr17 5623659 5623674 RFX5 JASPAR yes 21189524
chr17 5623661 5623677 RFX2 JASPAR yes 21189525
chr17 5623661 5623677 RFX3 JASPAR yes 21189526
chr17 5623661 5623677 RFX4 JASPAR yes 21189527
chr17 5623661 5623677 RFX5 JASPAR yes 21189528
chr17 5623668 5623673 ETS2 TRANSFAC yes 21189529
chr17 5623668 5623676 FEV JASPAR yes 21189530
chr17 5623690 5623700 BARHL2 JASPAR yes 21189531
chr17 5623731 5623745 JUN JASPAR yes 21189532
chr17 5623734 5623745 JUNB JASPAR yes 21189533
chr17 5623735 5623746 FOS JASPAR yes 21189534
chr17 5623735 5623746 JUND JASPAR yes 21189535
chr17 5623753 5623757 NFE TRANSFAC yes 21189536
SNP sites on vista23825[chr17:5623535-5623758]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 5623581 rs374537481 C T no 4719858
chr17 5623694 rs62055600 A G
BARHL2
4719859
Genes possibly regulated by vista23825[chr17:5623535-5623758]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 5675554 6027747 + WSCD1 ENSG00000179314.9 5675554 0.85 0.98 15317 48204
Expression level of Genes
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miRNAs possibly regulated by vista23825[chr17:5623535-5623758]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results