EnhancerDB
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  3. vista23828[chr17:5854578-5854683]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23828[chr17:5854578-5854683]
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Tissue distribution of vista23828
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Transcription factor that possibly regulate vista23828[chr17:5854578-5854683]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 5854566 5854578 GRHL1 JASPAR yes 21189634
chr17 5854566 5854578 GRHL1 JASPAR yes 52894557
chr17 5854598 5854613 AR JASPAR yes 21189635
chr17 5854598 5854613 AR JASPAR yes 52894559
chr17 5854598 5854615 NR3C1 JASPAR yes 21189636
chr17 5854598 5854615 NR3C2 JASPAR yes 21189637
chr17 5854598 5854615 NR3C1 JASPAR yes 52894560
chr17 5854598 5854615 NR3C2 JASPAR yes 52894561
chr17 5854605 5854617 FOXI1 JASPAR yes 21189638
chr17 5854605 5854617 FOXI1 JASPAR yes 52894562
chr17 5854606 5854617 FOXP2 JASPAR yes 21189639
chr17 5854606 5854617 FOXP2 JASPAR yes 52894563
chr17 5854606 5854620 FOXF2 JASPAR yes 21189640
chr17 5854606 5854620 FOXF2 JASPAR yes 52894564
chr17 5854607 5854615 FOXG1 JASPAR yes 21189641
chr17 5854607 5854615 FOXG1 JASPAR yes 52894565
chr17 5854608 5854618 HOXA13 JASPAR yes 21189642
chr17 5854608 5854618 HOXB13 JASPAR yes 21189643
chr17 5854608 5854618 HOXD13 JASPAR yes 21189644
chr17 5854608 5854618 HOXA13 JASPAR yes 52894566
chr17 5854608 5854618 HOXB13 JASPAR yes 52894567
chr17 5854608 5854618 HOXD13 JASPAR yes 52894568
chr17 5854608 5854619 FOXH1 JASPAR yes 21189645
chr17 5854608 5854619 HOXA10 JASPAR yes 21189646
chr17 5854608 5854619 FOXH1 JASPAR yes 52894569
chr17 5854608 5854619 HOXA10 JASPAR yes 52894570
chr17 5854609 5854618 CDX1 JASPAR yes 21189647
chr17 5854609 5854618 CDX1 JASPAR yes 52894571
chr17 5854609 5854620 CDX2 JASPAR yes 21189648
chr17 5854609 5854620 CDX2 JASPAR yes 52894572
chr17 5854634 5854638 YY1 TRANSFAC yes 21189649
chr17 5854634 5854638 YY1 TRANSFAC yes 52894573
chr17 5854652 5854673 IRF1 JASPAR yes 21189650
chr17 5854652 5854673 IRF1 JASPAR yes 52894574
chr17 5854654 5854669 PRDM1 JASPAR yes 21189651
chr17 5854654 5854669 STAT2 JASPAR yes 21189652
chr17 5854654 5854669 PRDM1 JASPAR yes 52894575
chr17 5854654 5854669 STAT2 JASPAR yes 52894576
chr17 5854655 5854676 IRF1 JASPAR yes 21189653
chr17 5854655 5854676 IRF1 JASPAR yes 52894577
chr17 5854656 5854677 IRF1 JASPAR yes 21189654
chr17 5854656 5854677 IRF1 JASPAR yes 52894578
chr17 5854657 5854672 FOXP1 JASPAR yes 21189655
chr17 5854657 5854672 FOXP1 JASPAR yes 52894579
chr17 5854657 5854678 IRF1 JASPAR yes 21189656
chr17 5854657 5854678 IRF1 JASPAR yes 52894580
chr17 5854658 5854673 FOXP1 JASPAR yes 21189657
chr17 5854658 5854673 FOXP1 JASPAR yes 52894581
chr17 5854658 5854679 IRF1 JASPAR yes 21189658
chr17 5854658 5854679 IRF1 JASPAR yes 52894582
chr17 5854659 5854674 FOXP1 JASPAR yes 21189659
chr17 5854659 5854674 FOXP1 JASPAR yes 52894583
chr17 5854659 5854680 IRF1 JASPAR yes 21189660
chr17 5854659 5854680 IRF1 JASPAR yes 52894584
chr17 5854660 5854675 FOXP1 JASPAR yes 21189661
chr17 5854660 5854675 FOXP1 JASPAR yes 52894585
chr17 5854660 5854681 IRF1 JASPAR yes 21189662
chr17 5854660 5854681 IRF1 JASPAR yes 52894586
chr17 5854661 5854676 FOXP1 JASPAR yes 21189663
chr17 5854661 5854676 FOXP1 JASPAR yes 52894587
chr17 5854661 5854682 IRF1 JASPAR yes 21189664
chr17 5854661 5854682 IRF1 JASPAR yes 52894588
chr17 5854662 5854677 FOXP1 JASPAR yes 21189665
chr17 5854662 5854677 FOXP1 JASPAR yes 52894589
chr17 5854663 5854678 FOXP1 JASPAR yes 21189666
chr17 5854663 5854678 FOXP1 JASPAR yes 52894590
chr17 5854663 5854684 IRF1 JASPAR yes 21189667
chr17 5854663 5854684 IRF1 JASPAR yes 52894591
chr17 5854664 5854679 FOXP1 JASPAR yes 21189668
chr17 5854664 5854679 FOXP1 JASPAR yes 52894592
chr17 5854665 5854680 FOXP1 JASPAR yes 21189669
chr17 5854665 5854680 FOXP1 JASPAR yes 52894593
chr17 5854666 5854681 FOXP1 JASPAR yes 21189670
chr17 5854666 5854681 FOXP1 JASPAR yes 52894594
chr17 5854667 5854682 FOXP1 JASPAR yes 21189671
chr17 5854667 5854682 FOXP1 JASPAR yes 52894595
chr17 5854670 5854685 MEF2C JASPAR yes 21189672
chr17 5854670 5854685 MEF2C JASPAR yes 52894596
chr17 5854679 5854689 SMAD3 JASPAR yes 21189673
chr17 5854679 5854689 SMAD3 JASPAR yes 52894597
SNP sites on vista23828[chr17:5854578-5854683]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 5854592 rs187054376 G A no 4721627
chr17 5854658 rs548494789 CTTTT C
FOXP1 IRF1 PRDM1 STAT2
4721628
chr17 5854658 rs567901955 CTTTT C
FOXP1 IRF1 PRDM1 STAT2
4721629
chr17 5854658 rs751211699 CTTTT C
FOXP1 IRF1 PRDM1 STAT2
4721630
Genes possibly regulated by vista23828[chr17:5854578-5854683]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista23828[chr17:5854578-5854683]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results