EnhancerDB
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  3. vista23832[chr17:6375097-6375395]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23832[chr17:6375097-6375395]
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Tissue distribution of vista23832
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Transcription factor that possibly regulate vista23832[chr17:6375097-6375395]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6374795 6375251 JUND UCSC Txn Factor no Conserved 108233205
chr17 6374862 6375112 RAD21 UCSC Txn Factor no Conserved 108233217
chr17 6374932 6375342 TFAP2C UCSC Txn Factor no Conserved 108233231
chr17 6374981 6375311 TFAP2A UCSC Txn Factor no Conserved 108233237
chr17 6375097 6375102 TFAP2A TRANSFAC yes 21189804
chr17 6375097 6375103 MZF1 JASPAR yes 21189805
chr17 6375120 6375125 GATA2 JASPAR yes 21189806
chr17 6375121 6375136 TFAP2A JASPAR yes 21189807
chr17 6375121 6375136 TFAP2C JASPAR yes 21189808
chr17 6375123 6375138 TFAP2A JASPAR yes 21189809
chr17 6375123 6375138 TFAP2C JASPAR yes 21189810
chr17 6375124 6375135 TFAP2A JASPAR yes 21189811
chr17 6375124 6375135 TFAP2B JASPAR yes 21189812
chr17 6375124 6375135 TFAP2C JASPAR yes 21189813
chr17 6375124 6375136 TFAP2A JASPAR yes 21189814
chr17 6375124 6375136 TFAP2B JASPAR yes 21189815
chr17 6375124 6375136 TFAP2C JASPAR yes 21189816
chr17 6375126 6375137 EBF1 JASPAR yes 21189817
chr17 6375132 6375138 MAZ TRANSFAC yes 21189818
chr17 6375132 6375143 E2F6 JASPAR yes 21189819
chr17 6375134 6375142 SP1 TRANSFAC yes 21189820
chr17 6375134 6375144 SP1 JASPAR yes 21189821
chr17 6375136 6375142 MAZ TRANSFAC yes 21189822
chr17 6375139 6375152 NFKB1 JASPAR yes 21189823
chr17 6375139 6375152 NFKB2 JASPAR yes 21189824
chr17 6375140 6375150 NFKB1 JASPAR yes 21189825
chr17 6375140 6375151 NFKB1 JASPAR yes 21189826
chr17 6375141 6375151 NFKB1 JASPAR yes 21189827
chr17 6375141 6375152 NFKB1 JASPAR yes 21189828
chr17 6375159 6375180 ZNF263 JASPAR yes 21189829
chr17 6375170 6375180 SP1 JASPAR yes 21189830
chr17 6375172 6375178 MAZ TRANSFAC yes 21189831
chr17 6375172 6375183 E2F6 JASPAR yes 21189832
chr17 6375201 6375206 MYB TRANSFAC yes 21189833
chr17 6375243 6375248 MYB TRANSFAC yes 21189834
chr17 6375257 6375265 EHF JASPAR yes 21189835
chr17 6375273 6375281 OTX1 JASPAR yes 21189836
chr17 6375273 6375281 OTX2 JASPAR yes 21189837
chr17 6375283 6375304 REST JASPAR yes 21189838
chr17 6375284 6375303 REST JASPAR yes 21189839
chr17 6375285 6375297 INSM1 JASPAR yes 21189840
chr17 6375300 6375312 INSM1 JASPAR yes 21189841
chr17 6375301 6375311 MZF1 JASPAR yes 21189842
chr17 6375343 6375351 FEV JASPAR yes 21189843
chr17 6375355 6375369 TLX1 JASPAR yes 21189844
chr17 6375373 6375394 REST JASPAR yes 21189845
chr17 6375376 6375381 H4TF1 TRANSFAC yes 21189846
chr17 6375383 6375394 NRL JASPAR yes 21189847
SNP sites on vista23832[chr17:6375097-6375395]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6375196 rs9902254 C T
JUND TFAP2A TFAP2C
4724116
chr17 6375245 rs11653127 T C
JUND MYB TFAP2A TFAP2C
4724117
chr17 6375385 rs73975554 A C
NRL REST
4724118
Genes possibly regulated by vista23832[chr17:6375097-6375395]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6297013 6338519 - AIPL1 ENSG00000129221.10 6338519 0.96 0.92 15318 63422
chr17 6347735 6354789 + FAM64A ENSG00000129195.11 6347735 0.9 1.0 15319 72638
chr17 6354584 6459814 - PITPNM3 ENSG00000091622.11 6459814 0.93 1.0 15320 15581
Expression level of Genes
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miRNAs possibly regulated by vista23832[chr17:6375097-6375395]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results