EnhancerDB
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  3. vista23834[chr17:6399359-6399733]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23834[chr17:6399359-6399733]
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Tissue distribution of vista23834
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Transcription factor that possibly regulate vista23834[chr17:6399359-6399733]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6399347 6399364 RARA JASPAR yes 21189910
chr17 6399347 6399364 RXRA JASPAR yes 21189911
chr17 6399347 6399364 RARA JASPAR yes 52915231
chr17 6399347 6399364 RXRA JASPAR yes 52915232
chr17 6399356 6399368 GLI2 JASPAR yes 21189912
chr17 6399356 6399368 ZBTB7B JASPAR yes 21189913
chr17 6399356 6399368 ZBTB7C JASPAR yes 21189914
chr17 6399356 6399368 GLI2 JASPAR yes 52915234
chr17 6399356 6399368 ZBTB7B JASPAR yes 52915235
chr17 6399356 6399368 ZBTB7C JASPAR yes 52915236
chr17 6399390 6399411 ZNF263 JASPAR yes 21189915
chr17 6399390 6399411 ZNF263 JASPAR yes 52915237
chr17 6399413 6399424 E2F6 JASPAR yes 21189916
chr17 6399413 6399424 E2F6 JASPAR yes 52915238
chr17 6399414 6399419 SP1 TRANSFAC yes 21189917
chr17 6399414 6399419 SP1 TRANSFAC yes 52915239
chr17 6399420 6399435 TFAP2C JASPAR yes 21189918
chr17 6399420 6399435 TFAP2C JASPAR yes 52915240
chr17 6399432 6399443 NRL JASPAR yes 21189919
chr17 6399432 6399443 NRL JASPAR yes 52915241
chr17 6399454 6399459 ETS2 TRANSFAC yes 21189920
chr17 6399454 6399459 ETS2 TRANSFAC yes 52915242
chr17 6399468 6399477 ZEB1 JASPAR yes 21189921
chr17 6399468 6399477 ZEB1 JASPAR yes 52915243
chr17 6399471 6399476 USF2 TRANSFAC yes 21189922
chr17 6399471 6399476 USF2 TRANSFAC yes 52915244
chr17 6399487 6399508 ZNF263 JASPAR yes 21189923
chr17 6399487 6399508 ZNF263 JASPAR yes 52915245
chr17 6399501 6399511 SP1 JASPAR yes 21189924
chr17 6399501 6399511 SP1 JASPAR yes 52915246
chr17 6399502 6399513 E2F6 JASPAR yes 21189925
chr17 6399502 6399513 E2F6 JASPAR yes 52915247
chr17 6399505 6399513 TBX15 JASPAR yes 21189926
chr17 6399505 6399513 TBX15 JASPAR yes 52915248
chr17 6399505 6399514 ZEB1 JASPAR yes 21189927
chr17 6399505 6399514 ZEB1 JASPAR yes 52915249
chr17 6399505 6399519 ZIC1 JASPAR yes 21189928
chr17 6399505 6399519 ZIC1 JASPAR yes 52915250
chr17 6399505 6399520 SCRT1 JASPAR yes 21189929
chr17 6399505 6399520 ZIC4 JASPAR yes 21189930
chr17 6399505 6399520 SCRT1 JASPAR yes 52915251
chr17 6399505 6399520 ZIC4 JASPAR yes 52915252
chr17 6399506 6399516 FIGLA JASPAR yes 21189931
chr17 6399506 6399516 TCF3 JASPAR yes 21189932
chr17 6399506 6399516 TCF4 JASPAR yes 21189933
chr17 6399506 6399516 FIGLA JASPAR yes 52915253
chr17 6399506 6399516 TCF3 JASPAR yes 52915254
chr17 6399506 6399516 TCF4 JASPAR yes 52915255
chr17 6399507 6399516 SNAI2 JASPAR yes 21189934
chr17 6399507 6399516 SNAI2 JASPAR yes 52915256
chr17 6399507 6399520 SCRT2 JASPAR yes 21189935
chr17 6399507 6399520 SCRT2 JASPAR yes 52915257
chr17 6399508 6399513 USF2 TRANSFAC yes 21189936
chr17 6399508 6399513 USF2 TRANSFAC yes 52915258
chr17 6399509 6399520 RUNX1 JASPAR yes 21189937
chr17 6399509 6399520 RUNX1 JASPAR yes 52915259
chr17 6399510 6399520 RUNX3 JASPAR yes 21189938
chr17 6399510 6399520 RUNX3 JASPAR yes 52915260
chr17 6399511 6399520 RUNX2 JASPAR yes 21189939
chr17 6399511 6399520 RUNX2 JASPAR yes 52915261
chr17 6399526 6399536 GABPA JASPAR yes 21189940
chr17 6399526 6399536 GABPA JASPAR yes 52915262
chr17 6399528 6399534 ETS1 JASPAR yes 21189941
chr17 6399528 6399534 SPI1 JASPAR yes 21189942
chr17 6399528 6399534 ETS1 JASPAR yes 52915263
chr17 6399528 6399534 SPI1 JASPAR yes 52915264
chr17 6399528 6399538 ELK1 JASPAR yes 21189943
chr17 6399528 6399538 ELK1 JASPAR yes 52915265
chr17 6399531 6399542 ELK4 JASPAR yes 21189944
chr17 6399531 6399542 FLI1 JASPAR yes 21189945
chr17 6399531 6399542 ELK4 JASPAR yes 52915266
chr17 6399531 6399542 FLI1 JASPAR yes 52915267
chr17 6399572 6399580 ISL2 JASPAR yes 21189946
chr17 6399572 6399580 ISL2 JASPAR yes 52915268
chr17 6399572 6399581 NKX3-2 JASPAR yes 21189947
chr17 6399572 6399581 NKX3-2 JASPAR yes 52915269
chr17 6399580 6399592 POU2F1 JASPAR yes 21189948
chr17 6399580 6399592 POU2F1 JASPAR yes 52915270
chr17 6399581 6399593 POU3F1 JASPAR yes 21189949
chr17 6399581 6399593 POU3F2 JASPAR yes 21189950
chr17 6399581 6399593 POU3F1 JASPAR yes 52915271
chr17 6399581 6399593 POU3F2 JASPAR yes 52915272
chr17 6399581 6399594 POU2F2 JASPAR yes 21189951
chr17 6399581 6399594 POU2F2 JASPAR yes 52915273
chr17 6399582 6399590 POU2F1 TRANSFAC yes 21189952
chr17 6399582 6399590 POU2F1 TRANSFAC yes 52915274
chr17 6399582 6399591 POU3F4 JASPAR yes 21189953
chr17 6399582 6399591 POU5F1B JASPAR yes 21189954
chr17 6399582 6399591 POU3F4 JASPAR yes 52915275
chr17 6399582 6399591 POU5F1B JASPAR yes 52915276
chr17 6399583 6399590 POU2F1 TRANSFAC yes 21189955
chr17 6399583 6399590 POU2F2 TRANSFAC yes 21189956
chr17 6399583 6399590 POU2F1 TRANSFAC yes 52915277
chr17 6399583 6399590 POU2F2 TRANSFAC yes 52915278
chr17 6399587 6399598 DUX4 JASPAR yes 21189957
chr17 6399587 6399598 DUX4 JASPAR yes 52915279
chr17 6399594 6399615 ZNF263 JASPAR yes 21189958
chr17 6399594 6399615 ZNF263 JASPAR yes 52915280
chr17 6399597 6399618 ZNF263 JASPAR yes 21189959
chr17 6399597 6399618 ZNF263 JASPAR yes 52915281
chr17 6399599 6399609 SP1 JASPAR yes 21189960
chr17 6399599 6399609 SP1 JASPAR yes 52915282
chr17 6399602 6399622 RREB1 JASPAR yes 21189961
chr17 6399602 6399622 RREB1 JASPAR yes 52915283
chr17 6399603 6399623 RREB1 JASPAR yes 21189962
chr17 6399603 6399623 RREB1 JASPAR yes 52915284
chr17 6399613 6399632 REST JASPAR yes 21189963
chr17 6399613 6399632 REST JASPAR yes 52915285
chr17 6399627 6399633 MYC TRANSFAC yes 21189964
chr17 6399627 6399633 MYC TRANSFAC yes 52915286
chr17 6399632 6399637 GATA2 JASPAR yes 21189965
chr17 6399632 6399637 GATA2 JASPAR yes 52915287
chr17 6399639 6399649 SP1 JASPAR yes 21189966
chr17 6399639 6399649 SP1 JASPAR yes 52915288
chr17 6399646 6399652 SP1 TRANSFAC yes 21189967
chr17 6399646 6399652 SP1 TRANSFAC yes 52915289
chr17 6399646 6399656 SP1 JASPAR yes 21189968
chr17 6399646 6399656 SP1 JASPAR yes 52915290
chr17 6399666 6399687 ZNF263 JASPAR yes 21189969
chr17 6399666 6399687 ZNF263 JASPAR yes 52915291
chr17 6399677 6399683 SP1 TRANSFAC yes 21189970
chr17 6399677 6399683 SP1 TRANSFAC yes 52915292
chr17 6399677 6399687 SP1 JASPAR yes 21189971
chr17 6399677 6399687 SP1 JASPAR yes 52915293
chr17 6399678 6399689 E2F6 JASPAR yes 21189972
chr17 6399678 6399689 E2F6 JASPAR yes 52915294
chr17 6399701 6399714 EOMES JASPAR yes 21189973
chr17 6399701 6399714 EOMES JASPAR yes 52915295
chr17 6399703 6399713 TBR1 JASPAR yes 21189974
chr17 6399703 6399713 TBR1 JASPAR yes 52915296
chr17 6399708 6399722 SPI1 JASPAR yes 21189975
chr17 6399708 6399722 SPI1 JASPAR yes 52915297
chr17 6399711 6399732 IRF1 JASPAR yes 21189976
chr17 6399711 6399732 IRF1 JASPAR yes 52915298
chr17 6399713 6399728 PRDM1 JASPAR yes 21189977
chr17 6399713 6399728 PRDM1 JASPAR yes 52915299
chr17 6399716 6399727 E2F6 JASPAR yes 21189978
chr17 6399716 6399727 E2F6 JASPAR yes 52915300
SNP sites on vista23834[chr17:6399359-6399733]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6399377 rs561492670 G T no 4724248
chr17 6399475 rs78218322 C T
USF2 ZEB1
4724249
chr17 6399543 rs117930271 T G no 4724250
chr17 6399662 rs114516342 C T no 4724251
Genes possibly regulated by vista23834[chr17:6399359-6399733]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6297013 6338519 - AIPL1 ENSG00000129221.10 6338519 0.96 0.92 15318 39160
chr17 6347735 6354789 + FAM64A ENSG00000129195.11 6347735 0.9 1.0 15319 48376
chr17 6354584 6459814 - PITPNM3 ENSG00000091622.11 6459814 0.93 1.0 15320 39919
Expression level of Genes
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miRNAs possibly regulated by vista23834[chr17:6399359-6399733]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results