EnhancerDB
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  3. vista23837[chr17:6478669-6478853]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23837[chr17:6478669-6478853]
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Tissue distribution of vista23837
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Transcription factor that possibly regulate vista23837[chr17:6478669-6478853]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6478628 6478924 EGR1 UCSC Txn Factor no Conserved 108233422
chr17 6478632 6478947 RUNX3 UCSC Txn Factor no Conserved 108233424
chr17 6478656 6478932 SPI1 UCSC Txn Factor no Conserved 108233430
chr17 6478672 6478686 PLAG1 JASPAR yes 21190059
chr17 6478672 6478686 PLAG1 JASPAR yes 52919266
chr17 6478673 6478688 TFAP2A JASPAR yes 21190060
chr17 6478673 6478688 TFAP2A JASPAR yes 52919267
chr17 6478673 6478690 RARA JASPAR yes 21190061
chr17 6478673 6478690 RXRA JASPAR yes 21190062
chr17 6478673 6478690 RARA JASPAR yes 52919268
chr17 6478673 6478690 RXRA JASPAR yes 52919269
chr17 6478674 6478685 TFAP2A JASPAR yes 21190063
chr17 6478674 6478685 TFAP2B JASPAR yes 21190064
chr17 6478674 6478685 TFAP2C JASPAR yes 21190065
chr17 6478674 6478685 TFAP2A JASPAR yes 52919270
chr17 6478674 6478685 TFAP2B JASPAR yes 52919271
chr17 6478674 6478685 TFAP2C JASPAR yes 52919272
chr17 6478682 6478697 JUND JASPAR yes 21190066
chr17 6478682 6478697 JUND JASPAR yes 52919273
chr17 6478683 6478696 JUN JASPAR yes 21190067
chr17 6478683 6478696 JUN JASPAR yes 52919274
chr17 6478684 6478692 CREB1 JASPAR yes 21190068
chr17 6478684 6478692 CREB1 JASPAR yes 52919275
chr17 6478684 6478701 RARA JASPAR yes 21190069
chr17 6478684 6478701 RARA JASPAR yes 52919276
chr17 6478712 6478719 SPIB JASPAR yes 21190070
chr17 6478712 6478719 SPIB JASPAR yes 52919277
chr17 6478728 6478733 SP1 TRANSFAC yes 21190071
chr17 6478728 6478733 SP1 TRANSFAC yes 52919278
chr17 6478740 6478745 TFAP2A TRANSFAC yes 21190072
chr17 6478740 6478745 TFAP2A TRANSFAC yes 52919279
chr17 6478740 6478746 MZF1 JASPAR yes 21190073
chr17 6478740 6478746 MZF1 JASPAR yes 52919280
chr17 6478763 6478780 PAX1 JASPAR yes 21190074
chr17 6478763 6478780 PAX1 JASPAR yes 52919281
chr17 6478769 6478780 FOSL2 JASPAR yes 21190075
chr17 6478769 6478780 FOSL2 JASPAR yes 52919282
chr17 6478770 6478781 FOS JASPAR yes 21190076
chr17 6478770 6478781 FOS JASPAR yes 52919283
chr17 6478777 6478796 PAX5 JASPAR yes 21190077
chr17 6478777 6478796 PAX5 JASPAR yes 52919284
chr17 6478786 6478807 ZNF263 JASPAR yes 21190078
chr17 6478786 6478807 ZNF263 JASPAR yes 52919285
chr17 6478787 6478791 LFA1 TRANSFAC yes 21190079
chr17 6478787 6478791 LFA1 TRANSFAC yes 52919286
chr17 6478794 6478807 ELF1 JASPAR yes 21190080
chr17 6478794 6478807 ELF1 JASPAR yes 52919287
chr17 6478797 6478804 SPIB JASPAR yes 21190081
chr17 6478797 6478804 SPIB JASPAR yes 52919288
chr17 6478797 6478807 ETV6 JASPAR yes 21190082
chr17 6478797 6478807 GABPA JASPAR yes 21190083
chr17 6478797 6478807 ETV6 JASPAR yes 52919289
chr17 6478797 6478807 GABPA JASPAR yes 52919290
chr17 6478797 6478808 FLI1 JASPAR yes 21190084
chr17 6478797 6478808 FLI1 JASPAR yes 52919291
chr17 6478797 6478818 ZNF263 JASPAR yes 21190085
chr17 6478797 6478818 ZNF263 JASPAR yes 52919292
chr17 6478798 6478806 EHF JASPAR yes 21190086
chr17 6478798 6478806 EHF JASPAR yes 52919293
chr17 6478798 6478819 ZNF263 JASPAR yes 21190087
chr17 6478798 6478819 ZNF263 JASPAR yes 52919294
chr17 6478799 6478806 SPI1 JASPAR yes 21190088
chr17 6478799 6478806 SPI1 JASPAR yes 52919295
chr17 6478804 6478814 ZNF740 JASPAR yes 21190089
chr17 6478804 6478814 ZNF740 JASPAR yes 52919296
chr17 6478806 6478816 ZNF740 JASPAR yes 21190090
chr17 6478806 6478816 ZNF740 JASPAR yes 52919297
chr17 6478811 6478832 ZNF263 JASPAR yes 21190091
chr17 6478811 6478832 ZNF263 JASPAR yes 52919298
chr17 6478847 6478853 MZF1 JASPAR yes 21190092
chr17 6478847 6478853 MZF1 JASPAR yes 52919299
SNP sites on vista23837[chr17:6478669-6478853]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6478673 rs12942925 G A
EGR1 PLAG1 RARA RUNX3 RXRA SPI1 TFAP2A
4724772
chr17 6478710 rs193084141 G A
EGR1 RUNX3 SPI1
4724773
chr17 6478733 rs550503513 G A,C
EGR1 RUNX3 SP1 SPI1
4724774
chr17 6478754 rs114587146 C A,T
EGR1 RUNX3 SPI1
4724775
chr17 6478755 rs74849853 G A,T
EGR1 RUNX3 SPI1
4724776
chr17 6478787 rs117271514 G A
EGR1 LFA1 PAX5 RUNX3 SPI1 ZNF263
4724777
chr17 6478819 rs111754920 G A
EGR1 RUNX3 SPI1 ZNF263
4724778
Genes possibly regulated by vista23837[chr17:6478669-6478853]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6354584 6459814 - PITPNM3 ENSG00000091622.11 6459814 0.93 1.0 15320 81145
chr17 6481468 6544247 - KIAA0753 ENSG00000198920.5 6544247 0.75 1.0 15321 34606
chr17 6544078 6547861 + TXNDC17 ENSG00000129235.6 6544078 0.93 0.99 15322 34775
chr17 6546635 6554954 - MED31 ENSG00000108590.6 6554954 0.79 0.99 15323 23899
chr17 6554971 6556791 + C17orf100 ENSG00000212734.4 6554971 0.81 0.9 15324 23882
Expression level of Genes
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miRNAs possibly regulated by vista23837[chr17:6478669-6478853]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results