EnhancerDB
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  3. vista23839[chr17:6542489-6542952]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23839[chr17:6542489-6542952]
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Tissue distribution of vista23839
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Transcription factor that possibly regulate vista23839[chr17:6542489-6542952]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6542830 6545025 POLR2A UCSC Txn Factor no Conserved 108233440
chr17 6542493 6542503 SP1 JASPAR yes 21190098
chr17 6542493 6542503 SP1 JASPAR yes 52921470
chr17 6542510 6542521 NFKB1 JASPAR yes 21190099
chr17 6542510 6542521 NFKB1 JASPAR yes 52921471
chr17 6542513 6542523 ZNF740 JASPAR yes 21190100
chr17 6542513 6542523 ZNF740 JASPAR yes 52921472
chr17 6542526 6542530 NFE TRANSFAC yes 21190101
chr17 6542526 6542530 NFE TRANSFAC yes 52921473
chr17 6542530 6542536 SP1 TRANSFAC yes 21190102
chr17 6542530 6542536 SP1 TRANSFAC yes 52921474
chr17 6542530 6542540 SP1 JASPAR yes 21190103
chr17 6542530 6542540 SP1 JASPAR yes 52921475
chr17 6542534 6542544 MZF1 JASPAR yes 21190104
chr17 6542534 6542544 MZF1 JASPAR yes 52921476
chr17 6542542 6542557 ZIC3 JASPAR yes 21190105
chr17 6542542 6542557 ZIC3 JASPAR yes 52921477
chr17 6542583 6542595 TEAD1 JASPAR yes 21190106
chr17 6542583 6542595 TEAD1 JASPAR yes 52921478
chr17 6542597 6542607 NFKB1 JASPAR yes 21190107
chr17 6542597 6542607 NFKB1 JASPAR yes 52921479
chr17 6542601 6542605 NFE TRANSFAC yes 21190108
chr17 6542601 6542605 NFE TRANSFAC yes 52921480
chr17 6542643 6542654 E2F6 JASPAR yes 21190109
chr17 6542643 6542654 E2F6 JASPAR yes 52921481
chr17 6542644 6542663 REST JASPAR yes 21190110
chr17 6542644 6542663 REST JASPAR yes 52921482
chr17 6542691 6542695 H4TF2 TRANSFAC yes 21190111
chr17 6542691 6542695 H4TF2 TRANSFAC yes 52921483
chr17 6542750 6542754 NFE TRANSFAC yes 21190112
chr17 6542750 6542754 NFE TRANSFAC yes 52921484
chr17 6542750 6542755 GATA1 TRANSFAC yes 21190113
chr17 6542750 6542755 GATA1 TRANSFAC yes 52921485
chr17 6542750 6542756 GATA3 JASPAR yes 21190114
chr17 6542750 6542756 GATA3 JASPAR yes 52921486
chr17 6542758 6542764 MZF1 JASPAR yes 21190115
chr17 6542758 6542764 MZF1 JASPAR yes 52921487
chr17 6542760 6542778 ESR1 JASPAR yes 21190116
chr17 6542760 6542778 ESR1 JASPAR yes 52921488
chr17 6542771 6542786 ZIC3 JASPAR yes 21190117
chr17 6542771 6542786 ZIC4 JASPAR yes 21190118
chr17 6542771 6542786 ZIC3 JASPAR yes 52921489
chr17 6542771 6542786 ZIC4 JASPAR yes 52921490
chr17 6542785 6542795 MZF1 JASPAR yes 21190119
chr17 6542785 6542795 MZF1 JASPAR yes 52921491
chr17 6542788 6542794 SP1 TRANSFAC yes 21190120
chr17 6542788 6542794 SP1 TRANSFAC yes 52921492
chr17 6542790 6542803 SCRT2 JASPAR yes 21190121
chr17 6542790 6542803 SCRT2 JASPAR yes 52921493
chr17 6542790 6542805 SCRT1 JASPAR yes 21190122
chr17 6542790 6542805 SCRT1 JASPAR yes 52921494
chr17 6542794 6542803 SNAI2 JASPAR yes 21190123
chr17 6542794 6542803 SNAI2 JASPAR yes 52921495
chr17 6542794 6542804 ID4 JASPAR yes 21190124
chr17 6542794 6542804 NHLH1 JASPAR yes 21190125
chr17 6542794 6542804 TCF3 JASPAR yes 21190126
chr17 6542794 6542804 TCF4 JASPAR yes 21190127
chr17 6542794 6542804 ID4 JASPAR yes 52921496
chr17 6542794 6542804 NHLH1 JASPAR yes 52921497
chr17 6542794 6542804 TCF3 JASPAR yes 52921498
chr17 6542794 6542804 TCF4 JASPAR yes 52921499
chr17 6542796 6542805 ZEB1 JASPAR yes 21190128
chr17 6542796 6542805 ZEB1 JASPAR yes 52921500
chr17 6542803 6542808 SP1 TRANSFAC yes 21190129
chr17 6542803 6542808 SP1 TRANSFAC yes 52921501
chr17 6542808 6542812 YY1 TRANSFAC yes 21190130
chr17 6542808 6542812 YY1 TRANSFAC yes 52921502
chr17 6542820 6542828 CREB1 JASPAR yes 21190131
chr17 6542820 6542828 CREB1 JASPAR yes 52921503
chr17 6542826 6542841 TFAP2A JASPAR yes 21190132
chr17 6542826 6542841 TFAP2C JASPAR yes 21190133
chr17 6542826 6542841 TFAP2A JASPAR yes 52921504
chr17 6542826 6542841 TFAP2C JASPAR yes 52921505
chr17 6542828 6542840 INSM1 JASPAR yes 21190134
chr17 6542828 6542840 INSM1 JASPAR yes 52921506
chr17 6542829 6542840 TFAP2A JASPAR yes 21190135
chr17 6542829 6542840 TFAP2B JASPAR yes 21190136
chr17 6542829 6542840 TFAP2C JASPAR yes 21190137
chr17 6542829 6542840 TFAP2A JASPAR yes 52921507
chr17 6542829 6542840 TFAP2B JASPAR yes 52921508
chr17 6542829 6542840 TFAP2C JASPAR yes 52921509
chr17 6542830 6542839 TFAP2A JASPAR yes 21190138
chr17 6542830 6542839 TFAP2A JASPAR yes 52921510
chr17 6542865 6542869 NFE TRANSFAC yes 21190139
chr17 6542871 6542875 NFE TRANSFAC yes 21190140
chr17 6542882 6542893 TFAP2A JASPAR yes 21190141
chr17 6542882 6542893 TFAP2B JASPAR yes 21190142
chr17 6542882 6542893 TFAP2C JASPAR yes 21190143
chr17 6542903 6542909 NFE2 TRANSFAC yes 21190144
chr17 6542924 6542938 PLAG1 JASPAR yes 21190145
chr17 6542926 6542939 TFAP2A JASPAR yes 21190146
chr17 6542926 6542939 TFAP2B JASPAR yes 21190147
chr17 6542926 6542939 TFAP2C JASPAR yes 21190148
chr17 6542926 6542941 TFAP2A JASPAR yes 21190149
chr17 6542926 6542941 TFAP2C JASPAR yes 21190150
chr17 6542935 6542940 SP1 TRANSFAC yes 21190151
chr17 6542938 6542947 TFAP2A JASPAR yes 21190152
SNP sites on vista23839[chr17:6542489-6542952]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6542632 rs1159433 G C no 4724972
chr17 6542648 rs527388533 C T
E2F6 REST
4724973
chr17 6542858 rs143314738 C G
POLR2A
4724974
Genes possibly regulated by vista23839[chr17:6542489-6542952]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6354584 6459814 - PITPNM3 ENSG00000091622.11 6459814 0.93 1.0 15320 17325
chr17 6481468 6544247 - KIAA0753 ENSG00000198920.5 6544247 0.75 1.0 15321 98705
chr17 6544078 6547861 + TXNDC17 ENSG00000129235.6 6544078 0.93 0.99 15322 98874
chr17 6546635 6554954 - MED31 ENSG00000108590.6 6554954 0.79 0.99 15323 87998
chr17 6554971 6556791 + C17orf100 ENSG00000212734.4 6554971 0.81 0.9 15324 87981
chr17 6588032 6616886 - SLC13A5 ENSG00000141485.11 6616886 1.0 0.99 15325 26066
Expression level of Genes
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miRNAs possibly regulated by vista23839[chr17:6542489-6542952]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results