EnhancerDB
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  3. vista23844[chr17:6771162-6771276]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23844[chr17:6771162-6771276]
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Tissue distribution of vista23844
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Transcription factor that possibly regulate vista23844[chr17:6771162-6771276]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6771237 6771504 CEBPB UCSC Txn Factor no Conserved 108233511
chr17 6771159 6771172 ATF4 JASPAR yes 21190338
chr17 6771159 6771172 ATF4 JASPAR yes 52927974
chr17 6771168 6771184 RFX2 JASPAR yes 21190339
chr17 6771168 6771184 RFX2 JASPAR yes 52927975
chr17 6771169 6771188 RFX2 JASPAR yes 21190340
chr17 6771169 6771188 RFX2 JASPAR yes 52927976
chr17 6771171 6771186 RFX5 JASPAR yes 21190341
chr17 6771171 6771186 RFX5 JASPAR yes 52927977
chr17 6771178 6771186 MEIS2 JASPAR yes 21190342
chr17 6771178 6771186 MEIS3 JASPAR yes 21190343
chr17 6771178 6771186 MEIS2 JASPAR yes 52927978
chr17 6771178 6771186 MEIS3 JASPAR yes 52927979
chr17 6771191 6771206 STAT2 JASPAR yes 21190344
chr17 6771191 6771206 STAT2 JASPAR yes 52927980
chr17 6771192 6771206 STAT1 JASPAR yes 21190345
chr17 6771192 6771206 STAT1 JASPAR yes 52927981
chr17 6771193 6771205 IRF1 JASPAR yes 21190346
chr17 6771193 6771205 IRF1 JASPAR yes 52927982
chr17 6771194 6771215 IRF1 JASPAR yes 21190347
chr17 6771194 6771215 IRF1 JASPAR yes 52927983
chr17 6771195 6771201 TCF4 TRANSFAC yes 21190348
chr17 6771195 6771201 TCF4 TRANSFAC yes 52927984
chr17 6771219 6771223 YY1 TRANSFAC yes 21190349
chr17 6771219 6771223 YY1 TRANSFAC yes 52927985
chr17 6771272 6771290 NR3C1 JASPAR yes 21190350
chr17 6771272 6771290 NR3C1 JASPAR yes 52927986
chr17 6771276 6771291 STAT2 JASPAR yes 21190351
chr17 6771276 6771291 STAT2 JASPAR yes 52927987
SNP sites on vista23844[chr17:6771162-6771276]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6771276 rs57317868 C T
CEBPB NR3C1 STAT2
4726012
Genes possibly regulated by vista23844[chr17:6771162-6771276]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6679542 6700420 + FBXO39 ENSG00000177294.6 6679542 0.83 0.97 15327 8380
chr17 6692452 6735080 - TEKT1 ENSG00000167858.8 6735080 0.98 1.0 15328 63918
Expression level of Genes
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miRNAs possibly regulated by vista23844[chr17:6771162-6771276]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 6920947 6920968 - hsa-miR-195-3p MIMAT0004615 6922977 0.08428776587763734 0.897059 0.676023 657
Expression level of miRNAs
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