EnhancerDB
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  3. vista23846[chr17:6814987-6815378]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23846[chr17:6814987-6815378]
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Tissue distribution of vista23846
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Transcription factor that possibly regulate vista23846[chr17:6814987-6815378]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6815011 6815025 ONECUT3 JASPAR yes 21190380
chr17 6815011 6815025 ONECUT3 JASPAR yes 52930546
chr17 6815035 6815039 NFE TRANSFAC yes 21190381
chr17 6815035 6815039 NFE TRANSFAC yes 52930547
chr17 6815042 6815053 PHOX2A JASPAR yes 21190382
chr17 6815042 6815053 PROP1 JASPAR yes 21190383
chr17 6815042 6815053 PHOX2A JASPAR yes 52930548
chr17 6815042 6815053 PROP1 JASPAR yes 52930549
chr17 6815045 6815048 MYB TRANSFAC yes 21190384
chr17 6815045 6815048 MYB TRANSFAC yes 52930550
chr17 6815048 6815052 YY1 TRANSFAC yes 21190385
chr17 6815048 6815052 YY1 TRANSFAC yes 52930551
chr17 6815061 6815074 POU3F3 JASPAR yes 21190386
chr17 6815061 6815074 POU3F3 JASPAR yes 52930552
chr17 6815092 6815100 RHOXF1 JASPAR yes 21190387
chr17 6815092 6815100 RHOXF1 JASPAR yes 52930553
chr17 6815093 6815114 IRF1 JASPAR yes 21190388
chr17 6815093 6815114 IRF1 JASPAR yes 52930554
chr17 6815097 6815103 TBP TRANSFAC yes 21190389
chr17 6815097 6815103 TBP TRANSFAC yes 52930555
chr17 6815098 6815113 FOXP1 JASPAR yes 21190390
chr17 6815098 6815113 FOXP1 JASPAR yes 52930556
chr17 6815101 6815112 FOXP2 JASPAR yes 21190391
chr17 6815101 6815112 FOXP2 JASPAR yes 52930557
chr17 6815121 6815125 YY1 TRANSFAC yes 21190392
chr17 6815121 6815125 YY1 TRANSFAC yes 52930558
chr17 6815144 6815151 TBP TRANSFAC yes 21190393
chr17 6815144 6815151 TFIID TRANSFAC yes 21190394
chr17 6815144 6815151 TBP TRANSFAC yes 52930559
chr17 6815144 6815151 TFIID TRANSFAC yes 52930560
chr17 6815173 6815178 ETS2 TRANSFAC yes 21190395
chr17 6815173 6815178 ETS2 TRANSFAC yes 52930561
chr17 6815199 6815220 IRF1 JASPAR yes 21190396
chr17 6815199 6815220 IRF1 JASPAR yes 52930562
chr17 6815236 6815244 GATA3 JASPAR yes 21190397
chr17 6815236 6815244 GATA3 JASPAR yes 52930563
chr17 6815259 6815274 FOXP1 JASPAR yes 21190398
chr17 6815259 6815274 FOXP1 JASPAR yes 52930564
chr17 6815274 6815280 SOX10 JASPAR yes 21190399
chr17 6815274 6815280 SOX10 JASPAR yes 52930565
chr17 6815283 6815289 ZNF354C JASPAR yes 21190400
chr17 6815283 6815289 ZNF354C JASPAR yes 52930566
chr17 6815283 6815293 GSC2 JASPAR yes 21190401
chr17 6815283 6815293 GSC JASPAR yes 21190402
chr17 6815283 6815293 GSC2 JASPAR yes 52930567
chr17 6815283 6815293 GSC JASPAR yes 52930568
chr17 6815284 6815293 PITX3 JASPAR yes 21190403
chr17 6815284 6815293 PITX3 JASPAR yes 52930569
chr17 6815289 6815301 YY1 JASPAR yes 21190404
chr17 6815289 6815301 YY1 JASPAR yes 52930570
chr17 6815294 6815298 YY1 TRANSFAC yes 21190405
chr17 6815294 6815298 YY1 TRANSFAC yes 52930571
chr17 6815294 6815307 POU2F2 JASPAR yes 21190406
chr17 6815294 6815307 POU2F2 JASPAR yes 52930572
chr17 6815327 6815341 POU4F1 JASPAR yes 21190407
chr17 6815327 6815341 POU4F1 JASPAR yes 52930573
chr17 6815327 6815343 POU4F2 JASPAR yes 21190408
chr17 6815327 6815343 POU4F3 JASPAR yes 21190409
chr17 6815327 6815343 POU4F2 JASPAR yes 52930574
chr17 6815327 6815343 POU4F3 JASPAR yes 52930575
chr17 6815328 6815344 POU4F3 JASPAR yes 21190410
chr17 6815328 6815344 POU4F3 JASPAR yes 52930576
chr17 6815329 6815334 GATA2 JASPAR yes 21190411
chr17 6815329 6815334 GATA2 JASPAR yes 52930577
chr17 6815330 6815344 POU4F1 JASPAR yes 21190412
chr17 6815330 6815344 POU4F1 JASPAR yes 52930578
chr17 6815341 6815356 PRDM1 JASPAR yes 21190413
chr17 6815341 6815356 PRDM1 JASPAR yes 52930579
chr17 6815354 6815357 MYB TRANSFAC yes 21190414
chr17 6815354 6815357 MYB TRANSFAC yes 52930580
SNP sites on vista23846[chr17:6814987-6815378]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6814998 rs553345179 C G,T no 4726303
chr17 6815045 rs77547672 A G
MYB PHOX2A PROP1
4726304
chr17 6815098 rs201641783 T TA
FOXP1 IRF1 RHOXF1 TBP
4726305
chr17 6815098 rs569460386 T TA
FOXP1 IRF1 RHOXF1 TBP
4726306
chr17 6815099 rs75241004 A T
FOXP1 IRF1 RHOXF1 TBP
4726307
chr17 6815132 rs73345765 A T no 4726308
chr17 6815263 rs71976994 CTG C
FOXP1
4726309
chr17 6815352 rs6502986 A G
PRDM1
4726310
Genes possibly regulated by vista23846[chr17:6814987-6815378]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6692452 6735080 - TEKT1 ENSG00000167858.8 6735080 0.98 1.0 15328 20093
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 15994
Expression level of Genes
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miRNAs possibly regulated by vista23846[chr17:6814987-6815378]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 6920947 6920968 - hsa-miR-195-3p MIMAT0004615 6922977 0.12288797683285069 0.897059 0.676023 657
Expression level of miRNAs
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