EnhancerDB
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  3. vista23850[chr17:6822879-6823265]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23850[chr17:6822879-6823265]
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Tissue distribution of vista23850
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Transcription factor that possibly regulate vista23850[chr17:6822879-6823265]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6822889 6822895 SOX10 JASPAR yes 21190585
chr17 6822894 6822904 GCM2 JASPAR yes 21190586
chr17 6822894 6822906 INSM1 JASPAR yes 21190587
chr17 6822897 6822917 RREB1 JASPAR yes 21190588
chr17 6822933 6822936 MYB TRANSFAC yes 21190589
chr17 6822941 6822962 IRF1 JASPAR yes 21190590
chr17 6822946 6822950 YY1 TRANSFAC yes 21190591
chr17 6822962 6822968 LEF1 TRANSFAC yes 21190592
chr17 6822962 6822968 SOX10 JASPAR yes 21190593
chr17 6822966 6822980 E2F7 JASPAR yes 21190594
chr17 6822968 6822978 ZNF740 JASPAR yes 21190595
chr17 6822994 6823009 FOXP1 JASPAR yes 21190596
chr17 6822997 6823008 FOXP2 JASPAR yes 21190597
chr17 6822998 6823006 FOXO3 JASPAR yes 21190598
chr17 6822999 6823008 SRY JASPAR yes 21190599
chr17 6823007 6823022 AR JASPAR yes 21190600
chr17 6823030 6823044 POU4F1 JASPAR yes 21190601
chr17 6823030 6823046 POU4F3 JASPAR yes 21190602
chr17 6823046 6823064 NR3C1 JASPAR yes 21190603
chr17 6823068 6823082 FOXF2 JASPAR yes 21190604
chr17 6823068 6823083 FOXP1 JASPAR yes 21190605
chr17 6823071 6823082 FOXP2 JASPAR yes 21190606
chr17 6823073 6823080 FOXD2 JASPAR yes 21190607
chr17 6823073 6823080 FOXI1 JASPAR yes 21190608
chr17 6823073 6823080 FOXL1 JASPAR yes 21190609
chr17 6823073 6823080 FOXO4 JASPAR yes 21190610
chr17 6823073 6823080 FOXO6 JASPAR yes 21190611
chr17 6823073 6823080 FOXP3 JASPAR yes 21190612
chr17 6823073 6823081 FOXD1 JASPAR yes 21190613
chr17 6823073 6823081 FOXG1 JASPAR yes 21190614
chr17 6823073 6823081 FOXO3 JASPAR yes 21190615
chr17 6823073 6823082 SRY JASPAR yes 21190616
chr17 6823083 6823094 ELF5 JASPAR yes 21190617
chr17 6823090 6823094 NFE TRANSFAC yes 21190618
chr17 6823101 6823107 SOX10 JASPAR yes 21190619
chr17 6823121 6823135 GLIS3 JASPAR yes 21190620
chr17 6823127 6823145 NR3C1 JASPAR yes 21190621
chr17 6823165 6823172 NKX3-1 JASPAR yes 21190622
chr17 6823169 6823176 NKX3-1 JASPAR yes 21190623
chr17 6823193 6823199 LEF1 TRANSFAC yes 21190624
chr17 6823193 6823199 SOX10 JASPAR yes 21190625
chr17 6823208 6823223 HNF4A JASPAR yes 21190626
chr17 6823232 6823247 TFAP2A JASPAR yes 21190627
chr17 6823232 6823247 TFAP2C JASPAR yes 21190628
chr17 6823234 6823246 TFAP2A JASPAR yes 21190629
chr17 6823234 6823249 TFAP2A JASPAR yes 21190630
chr17 6823234 6823249 TFAP2C JASPAR yes 21190631
chr17 6823235 6823246 TFAP2A JASPAR yes 21190632
chr17 6823235 6823246 TFAP2B JASPAR yes 21190633
chr17 6823255 6823265 SREBF1 JASPAR yes 21190634
SNP sites on vista23850[chr17:6822879-6823265]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6823122 rs151166751 G C
GLIS3
4726428
chr17 6823249 rs77853197 T C
TFAP2A TFAP2C
4726429
Genes possibly regulated by vista23850[chr17:6822879-6823265]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6692452 6735080 - TEKT1 ENSG00000167858.8 6735080 0.98 1.0 15328 12201
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 7597
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 23881
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 7529
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 5510
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 7311
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 5451
Expression level of Genes
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miRNAs possibly regulated by vista23850[chr17:6822879-6823265]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 6920947 6920968 - hsa-miR-195-3p MIMAT0004615 6922977 0.1338924955736142 0.897059 0.676023 657
Expression level of miRNAs
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