EnhancerDB
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  3. vista23851[chr17:6829288-6829561]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23851[chr17:6829288-6829561]
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Tissue distribution of vista23851
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Transcription factor that possibly regulate vista23851[chr17:6829288-6829561]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6829281 6829296 STAT1 JASPAR yes 21190635
chr17 6829281 6829296 STAT1 JASPAR yes 52931477
chr17 6829284 6829299 MEF2C JASPAR yes 21190636
chr17 6829284 6829299 MEF2C JASPAR yes 52931478
chr17 6829288 6829303 FOXP1 JASPAR yes 21190637
chr17 6829288 6829303 FOXP1 JASPAR yes 52931479
chr17 6829290 6829305 FOXP1 JASPAR yes 21190638
chr17 6829290 6829305 FOXP1 JASPAR yes 52931480
chr17 6829290 6829311 IRF1 JASPAR yes 21190639
chr17 6829290 6829311 IRF1 JASPAR yes 52931481
chr17 6829291 6829312 IRF1 JASPAR yes 21190640
chr17 6829291 6829312 IRF1 JASPAR yes 52931482
chr17 6829294 6829300 TBP TRANSFAC yes 21190641
chr17 6829294 6829300 TBP TRANSFAC yes 52931483
chr17 6829297 6829318 IRF1 JASPAR yes 21190642
chr17 6829297 6829318 IRF1 JASPAR yes 52931484
chr17 6829333 6829346 SMAD2 JASPAR yes 21190643
chr17 6829333 6829346 SMAD2 JASPAR yes 52931485
chr17 6829339 6829349 FIGLA JASPAR yes 21190644
chr17 6829339 6829349 ID4 JASPAR yes 21190645
chr17 6829339 6829349 TCF3 JASPAR yes 21190646
chr17 6829339 6829349 TCF4 JASPAR yes 21190647
chr17 6829339 6829349 FIGLA JASPAR yes 52931486
chr17 6829339 6829349 ID4 JASPAR yes 52931487
chr17 6829339 6829349 TCF3 JASPAR yes 52931488
chr17 6829339 6829349 TCF4 JASPAR yes 52931489
chr17 6829341 6829346 USF2 TRANSFAC yes 21190648
chr17 6829341 6829346 USF2 TRANSFAC yes 52931490
chr17 6829347 6829362 MAFK JASPAR yes 21190649
chr17 6829347 6829362 MAFK JASPAR yes 52931491
chr17 6829351 6829362 NRL JASPAR yes 21190650
chr17 6829351 6829362 NRL JASPAR yes 52931492
chr17 6829355 6829370 ZIC3 JASPAR yes 21190651
chr17 6829355 6829370 ZIC3 JASPAR yes 52931493
chr17 6829364 6829378 PLAG1 JASPAR yes 21190652
chr17 6829364 6829378 PLAG1 JASPAR yes 52931494
chr17 6829371 6829379 TBX15 JASPAR yes 21190653
chr17 6829371 6829379 TBX15 JASPAR yes 52931495
chr17 6829371 6829382 E2F6 JASPAR yes 21190654
chr17 6829371 6829382 E2F6 JASPAR yes 52931496
chr17 6829372 6829377 SP1 TRANSFAC yes 21190655
chr17 6829372 6829377 SP1 TRANSFAC yes 52931497
chr17 6829373 6829393 ESR1 JASPAR yes 21190656
chr17 6829373 6829393 ESR1 JASPAR yes 52931498
chr17 6829380 6829391 USF1 JASPAR yes 21190657
chr17 6829380 6829391 USF2 JASPAR yes 21190658
chr17 6829380 6829391 USF1 JASPAR yes 52931499
chr17 6829380 6829391 USF2 JASPAR yes 52931500
chr17 6829381 6829391 SREBF2 JASPAR yes 21190659
chr17 6829381 6829391 SREBF2 JASPAR yes 52931501
chr17 6829383 6829388 USF2 TRANSFAC yes 21190660
chr17 6829383 6829388 USF2 TRANSFAC yes 52931502
chr17 6829437 6829452 MEF2C JASPAR yes 21190661
chr17 6829437 6829452 MEF2C JASPAR yes 52931503
chr17 6829438 6829453 MEF2A JASPAR yes 21190662
chr17 6829438 6829453 MEF2A JASPAR yes 52931504
chr17 6829439 6829451 MEF2A JASPAR yes 21190663
chr17 6829439 6829451 MEF2B JASPAR yes 21190664
chr17 6829439 6829451 MEF2D JASPAR yes 21190665
chr17 6829439 6829451 MEF2A JASPAR yes 52931505
chr17 6829439 6829451 MEF2B JASPAR yes 52931506
chr17 6829439 6829451 MEF2D JASPAR yes 52931507
chr17 6829451 6829470 PAX5 JASPAR yes 21190666
chr17 6829451 6829470 PAX5 JASPAR yes 52931508
chr17 6829473 6829482 ZEB1 JASPAR yes 21190667
chr17 6829473 6829482 ZEB1 JASPAR yes 52931509
chr17 6829476 6829481 USF2 TRANSFAC yes 21190668
chr17 6829476 6829481 USF2 TRANSFAC yes 52931510
chr17 6829530 6829540 SP1 JASPAR yes 21190669
chr17 6829530 6829540 SP1 JASPAR yes 52931511
chr17 6829530 6829551 ZNF263 JASPAR yes 21190670
chr17 6829530 6829551 ZNF263 JASPAR yes 52931512
chr17 6829532 6829537 SP1 TRANSFAC yes 21190671
chr17 6829532 6829537 SP1 TRANSFAC yes 52931513
chr17 6829532 6829544 HINFP JASPAR yes 21190672
chr17 6829532 6829544 HINFP JASPAR yes 52931514
chr17 6829537 6829554 ESR1 JASPAR yes 21190673
chr17 6829537 6829554 ESR1 JASPAR yes 52931515
chr17 6829537 6829555 ESR2 JASPAR yes 21190674
chr17 6829537 6829555 ESR2 JASPAR yes 52931516
chr17 6829547 6829564 RARA JASPAR yes 21190675
chr17 6829547 6829564 RARA JASPAR yes 52931517
chr17 6829555 6829566 CEBPB JASPAR yes 21190676
chr17 6829555 6829566 CEBPB JASPAR yes 52931518
chr17 6829556 6829567 CEBPA JASPAR yes 21190677
chr17 6829556 6829567 CEBPA JASPAR yes 52931519
chr17 6829560 6829574 PLAG1 JASPAR yes 21190678
chr17 6829560 6829574 PLAG1 JASPAR yes 52931520
SNP sites on vista23851[chr17:6829288-6829561]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6829288 rs515522 A G
FOXP1 MEF2C STAT1
4726500
chr17 6829295 rs150009557 T TA
FOXP1 IRF1 MEF2C STAT1 TBP
4726501
chr17 6829333 rs189940536 G A
SMAD2
4726502
chr17 6829342 rs141615011 C T
FIGLA ID4 SMAD2 TCF3 TCF4 USF2
4726503
chr17 6829363 rs147056382 G A
ZIC3
4726504
chr17 6829403 rs112945404 G A no 4726505
chr17 6829424 rs149135928 G T no 4726506
chr17 6829466 rs143189753 A C
PAX5
4726507
Genes possibly regulated by vista23851[chr17:6829288-6829561]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6692452 6735080 - TEKT1 ENSG00000167858.8 6735080 0.98 1.0 15328 5792
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 13893
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 30177
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 13825
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 11806
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 13607
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 11747
chr17 6926339 6933609 + BCL6B ENSG00000161940.6 6926339 0.86 1.0 15335 3222
Expression level of Genes
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miRNAs possibly regulated by vista23851[chr17:6829288-6829561]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 6920947 6920968 - hsa-miR-195-3p MIMAT0004615 6922977 0.1442952199226968 0.897059 0.676023 657
Expression level of miRNAs
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