EnhancerDB
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  3. vista23852[chr17:6829755-6829811]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23852[chr17:6829755-6829811]
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Tissue distribution of vista23852
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Transcription factor that possibly regulate vista23852[chr17:6829755-6829811]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6829752 6829762 NFATC3 JASPAR yes 21190679
chr17 6829752 6829762 NFATC3 JASPAR yes 52931541
chr17 6829754 6829761 NFATC2 JASPAR yes 21190680
chr17 6829754 6829761 NFATC2 JASPAR yes 52931542
chr17 6829755 6829770 FOXP1 JASPAR yes 21190681
chr17 6829755 6829770 FOXP1 JASPAR yes 52931543
chr17 6829755 6829776 IRF1 JASPAR yes 21190682
chr17 6829755 6829776 IRF1 JASPAR yes 52931544
chr17 6829756 6829771 FOXP1 JASPAR yes 21190683
chr17 6829756 6829771 FOXP1 JASPAR yes 52931545
chr17 6829756 6829777 IRF1 JASPAR yes 21190684
chr17 6829756 6829777 IRF1 JASPAR yes 52931546
chr17 6829757 6829772 FOXP1 JASPAR yes 21190685
chr17 6829757 6829772 FOXP1 JASPAR yes 52931547
chr17 6829757 6829778 IRF1 JASPAR yes 21190686
chr17 6829757 6829778 IRF1 JASPAR yes 52931548
chr17 6829758 6829773 FOXP1 JASPAR yes 21190687
chr17 6829758 6829773 FOXP1 JASPAR yes 52931549
chr17 6829758 6829779 IRF1 JASPAR yes 21190688
chr17 6829758 6829779 IRF1 JASPAR yes 52931550
chr17 6829759 6829774 FOXP1 JASPAR yes 21190689
chr17 6829759 6829774 FOXP1 JASPAR yes 52931551
chr17 6829759 6829780 IRF1 JASPAR yes 21190690
chr17 6829759 6829780 IRF1 JASPAR yes 52931552
chr17 6829760 6829775 FOXP1 JASPAR yes 21190691
chr17 6829760 6829775 FOXP1 JASPAR yes 52931553
chr17 6829760 6829781 IRF1 JASPAR yes 21190692
chr17 6829760 6829781 IRF1 JASPAR yes 52931554
chr17 6829761 6829776 FOXP1 JASPAR yes 21190693
chr17 6829761 6829776 FOXP1 JASPAR yes 52931555
chr17 6829761 6829782 IRF1 JASPAR yes 21190694
chr17 6829761 6829782 IRF1 JASPAR yes 52931556
chr17 6829762 6829777 FOXP1 JASPAR yes 21190695
chr17 6829762 6829777 FOXP1 JASPAR yes 52931557
chr17 6829763 6829784 IRF1 JASPAR yes 21190696
chr17 6829763 6829784 IRF1 JASPAR yes 52931558
chr17 6829764 6829779 FOXP1 JASPAR yes 21190697
chr17 6829764 6829779 FOXP1 JASPAR yes 52931559
chr17 6829766 6829781 FOXP1 JASPAR yes 21190698
chr17 6829766 6829781 FOXP1 JASPAR yes 52931560
SNP sites on vista23852[chr17:6829755-6829811]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6829757 rs199705984 GA G
FOXP1 IRF1 NFATC2 NFATC3
4726514
chr17 6829757 rs755387189 GA G
FOXP1 IRF1 NFATC2 NFATC3
4726515
chr17 6829783 rs76635685 C T
IRF1
4726516
Genes possibly regulated by vista23852[chr17:6829755-6829811]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6692452 6735080 - TEKT1 ENSG00000167858.8 6735080 0.98 1.0 15328 5325
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 14143
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 30427
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 14075
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 12056
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 13857
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 11997
chr17 6926339 6933609 + BCL6B ENSG00000161940.6 6926339 0.86 1.0 15335 3472
Expression level of Genes
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miRNAs possibly regulated by vista23852[chr17:6829755-6829811]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 6920947 6920968 - hsa-miR-195-3p MIMAT0004615 6922977 0.14493163138690615 0.897059 0.676023 657
Expression level of miRNAs
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