EnhancerDB
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  3. vista23853[chr17:6839831-6840063]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23853[chr17:6839831-6840063]
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Tissue distribution of vista23853
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Transcription factor that possibly regulate vista23853[chr17:6839831-6840063]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6839832 6839847 STAT2 JASPAR yes 21190699
chr17 6839832 6839847 STAT2 JASPAR yes 52932057
chr17 6839833 6839847 STAT1 JASPAR yes 21190700
chr17 6839833 6839847 STAT1 JASPAR yes 52932058
chr17 6839834 6839846 IRF1 JASPAR yes 21190701
chr17 6839834 6839846 IRF1 JASPAR yes 52932059
chr17 6839845 6839860 HSF1 JASPAR yes 21190702
chr17 6839845 6839860 HSF1 JASPAR yes 52932060
chr17 6839850 6839861 NFKB1 JASPAR yes 21190703
chr17 6839850 6839861 NFKB1 JASPAR yes 52932061
chr17 6839851 6839861 NFKB1 JASPAR yes 21190704
chr17 6839851 6839861 NFKB1 JASPAR yes 52932062
chr17 6839857 6839871 PLAG1 JASPAR yes 21190705
chr17 6839857 6839871 PLAG1 JASPAR yes 52932063
chr17 6839859 6839868 SOX9 JASPAR yes 21190706
chr17 6839859 6839868 SOX9 JASPAR yes 52932064
chr17 6839872 6839890 NFYA JASPAR yes 21190707
chr17 6839872 6839890 NFYA JASPAR yes 52932065
chr17 6839875 6839891 NFYA JASPAR yes 21190708
chr17 6839875 6839891 NFYA JASPAR yes 52932066
chr17 6839877 6839889 PBX1 JASPAR yes 21190709
chr17 6839877 6839889 PBX1 JASPAR yes 52932067
chr17 6839878 6839893 NFYB JASPAR yes 21190710
chr17 6839878 6839893 NFYB JASPAR yes 52932068
chr17 6839880 6839885 NFY TRANSFAC yes 21190711
chr17 6839880 6839885 NFY TRANSFAC yes 52932069
chr17 6839892 6839907 NFYB JASPAR yes 21190712
chr17 6839892 6839907 NFYB JASPAR yes 52932070
chr17 6839894 6839910 NFYA JASPAR yes 21190713
chr17 6839894 6839910 NFYA JASPAR yes 52932071
chr17 6839895 6839913 NFYA JASPAR yes 21190714
chr17 6839895 6839913 NFYA JASPAR yes 52932072
chr17 6839899 6839903 H1TF2 TRANSFAC yes 21190715
chr17 6839899 6839903 NFE TRANSFAC yes 21190716
chr17 6839899 6839903 SRF TRANSFAC yes 21190717
chr17 6839899 6839903 H1TF2 TRANSFAC yes 52932073
chr17 6839899 6839903 NFE TRANSFAC yes 52932074
chr17 6839899 6839903 SRF TRANSFAC yes 52932075
chr17 6839906 6839924 IRF2 JASPAR yes 21190718
chr17 6839906 6839924 IRF2 JASPAR yes 52932076
chr17 6839907 6839928 IRF1 JASPAR yes 21190719
chr17 6839907 6839928 IRF1 JASPAR yes 52932077
chr17 6839909 6839924 PRDM1 JASPAR yes 21190720
chr17 6839909 6839924 STAT2 JASPAR yes 21190721
chr17 6839909 6839924 PRDM1 JASPAR yes 52932078
chr17 6839909 6839924 STAT2 JASPAR yes 52932079
chr17 6839910 6839924 STAT1 JASPAR yes 21190722
chr17 6839910 6839924 STAT1 JASPAR yes 52932080
chr17 6839911 6839923 IRF1 JASPAR yes 21190723
chr17 6839911 6839923 IRF1 JASPAR yes 52932081
chr17 6839911 6839925 IRF7 JASPAR yes 21190724
chr17 6839911 6839925 IRF8 JASPAR yes 21190725
chr17 6839911 6839925 IRF7 JASPAR yes 52932082
chr17 6839911 6839925 IRF8 JASPAR yes 52932083
chr17 6839911 6839926 IRF9 JASPAR yes 21190726
chr17 6839911 6839926 IRF9 JASPAR yes 52932084
chr17 6839916 6839920 YY1 TRANSFAC yes 21190727
chr17 6839916 6839920 YY1 TRANSFAC yes 52932085
chr17 6839946 6839950 LFA1 TRANSFAC yes 21190728
chr17 6839946 6839950 LFA1 TRANSFAC yes 52932086
chr17 6839950 6839960 MYF6 JASPAR yes 21190729
chr17 6839950 6839960 MYF6 JASPAR yes 52932087
chr17 6839955 6839959 NFE TRANSFAC yes 21190730
chr17 6839955 6839959 NFE TRANSFAC yes 52932088
chr17 6839996 6840001 GATA2 JASPAR yes 21190731
chr17 6839996 6840001 GATA2 JASPAR yes 52932089
chr17 6839997 6840004 POU2F1 TRANSFAC yes 21190732
chr17 6839997 6840004 POU2F1 TRANSFAC yes 52932090
chr17 6840039 6840060 ZNF263 JASPAR yes 21190733
chr17 6840039 6840060 ZNF263 JASPAR yes 52932091
chr17 6840047 6840061 SPIC JASPAR yes 21190734
chr17 6840047 6840061 SPIC JASPAR yes 52932092
chr17 6840055 6840059 YY1 TRANSFAC yes 21190735
chr17 6840055 6840059 YY1 TRANSFAC yes 52932093
SNP sites on vista23853[chr17:6839831-6840063]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6839858 rs183315692 T G
HSF1 NFKB1 PLAG1
4726616
chr17 6839871 rs188002707 C T
PLAG1
4726617
chr17 6839930 rs372639361 C T no 4726618
chr17 6839993 rs377108227 C T no 4726619
Genes possibly regulated by vista23853[chr17:6839831-6840063]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 24395
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 40679
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 24327
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 22308
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 24109
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 22249
chr17 6926339 6933609 + BCL6B ENSG00000161940.6 6926339 0.86 1.0 15335 13724
chr17 6939394 6943440 + SLC16A13 ENSG00000174327.6 6939394 0.93 0.99 15336 669
Expression level of Genes
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miRNAs possibly regulated by vista23853[chr17:6839831-6840063]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 6920947 6920968 - hsa-miR-195-3p MIMAT0004615 6922977 0.165611444134039 0.897059 0.676023 657
Expression level of miRNAs
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