EnhancerDB
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  3. vista23854[chr17:6842907-6843154]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23854[chr17:6842907-6843154]
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Tissue distribution of vista23854
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Transcription factor that possibly regulate vista23854[chr17:6842907-6843154]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6842904 6842918 NR2F1 JASPAR yes 21190736
chr17 6842904 6842918 NR2F1 JASPAR yes 52932505
chr17 6842909 6842922 NR2F1 JASPAR yes 21190737
chr17 6842909 6842922 NR2F1 JASPAR yes 52932506
chr17 6842910 6842918 CREB1 JASPAR yes 21190738
chr17 6842910 6842918 CREB1 JASPAR yes 52932507
chr17 6842910 6842925 HNF4G JASPAR yes 21190739
chr17 6842910 6842925 NR2C2 JASPAR yes 21190740
chr17 6842910 6842925 HNF4G JASPAR yes 52932508
chr17 6842910 6842925 NR2C2 JASPAR yes 52932509
chr17 6842911 6842925 RXRB JASPAR yes 21190741
chr17 6842911 6842925 RXRG JASPAR yes 21190742
chr17 6842911 6842925 RXRB JASPAR yes 52932510
chr17 6842911 6842925 RXRG JASPAR yes 52932511
chr17 6842911 6842926 HNF4A JASPAR yes 21190743
chr17 6842911 6842926 HNF4A JASPAR yes 52932512
chr17 6842913 6842917 ESR1 TRANSFAC yes 21190744
chr17 6842913 6842917 ESR1 TRANSFAC yes 52932513
chr17 6842931 6842943 POU3F2 JASPAR yes 21190745
chr17 6842931 6842943 POU3F2 JASPAR yes 52932514
chr17 6842939 6842947 FEV JASPAR yes 21190746
chr17 6842939 6842947 FEV JASPAR yes 52932515
chr17 6842947 6842962 STAT1 JASPAR yes 21190747
chr17 6842947 6842962 STAT1 JASPAR yes 52932516
chr17 6842949 6842960 STAT1 JASPAR yes 21190748
chr17 6842949 6842960 STAT3 JASPAR yes 21190749
chr17 6842949 6842960 STAT1 JASPAR yes 52932517
chr17 6842949 6842960 STAT3 JASPAR yes 52932518
chr17 6842967 6842982 PRDM1 JASPAR yes 21190750
chr17 6842967 6842982 PRDM1 JASPAR yes 52932519
chr17 6842980 6842985 MYC TRANSFAC yes 21190751
chr17 6842980 6842985 MYC TRANSFAC yes 52932520
chr17 6843041 6843052 FLI1 JASPAR yes 21190752
chr17 6843041 6843052 FLI1 JASPAR yes 52932521
chr17 6843042 6843053 ELF5 JASPAR yes 21190753
chr17 6843042 6843053 ELF5 JASPAR yes 52932522
chr17 6843042 6843054 EHF JASPAR yes 21190754
chr17 6843042 6843054 ELF4 JASPAR yes 21190755
chr17 6843042 6843054 EHF JASPAR yes 52932523
chr17 6843042 6843054 ELF4 JASPAR yes 52932524
chr17 6843042 6843055 ELF1 JASPAR yes 21190756
chr17 6843042 6843055 ELF1 JASPAR yes 52932525
chr17 6843043 6843050 SPI1 JASPAR yes 21190757
chr17 6843043 6843050 SPI1 JASPAR yes 52932526
chr17 6843043 6843051 EHF JASPAR yes 21190758
chr17 6843043 6843051 FEV JASPAR yes 21190759
chr17 6843043 6843051 EHF JASPAR yes 52932527
chr17 6843043 6843051 FEV JASPAR yes 52932528
chr17 6843061 6843082 ZNF263 JASPAR yes 21190760
chr17 6843061 6843082 ZNF263 JASPAR yes 52932529
chr17 6843066 6843077 E2F6 JASPAR yes 21190761
chr17 6843066 6843077 E2F6 JASPAR yes 52932530
chr17 6843074 6843086 TEAD1 JASPAR yes 21190762
chr17 6843074 6843086 TEAD1 JASPAR yes 52932531
chr17 6843076 6843086 TEAD1 JASPAR yes 21190763
chr17 6843076 6843086 TEAD4 JASPAR yes 21190764
chr17 6843076 6843086 TEAD1 JASPAR yes 52932532
chr17 6843076 6843086 TEAD4 JASPAR yes 52932533
chr17 6843077 6843085 TEAD3 JASPAR yes 21190765
chr17 6843077 6843085 TEAD3 JASPAR yes 52932534
chr17 6843090 6843096 SP1 TRANSFAC yes 21190766
chr17 6843090 6843096 SP1 TRANSFAC yes 52932535
chr17 6843097 6843117 PPARG JASPAR yes 21190767
chr17 6843097 6843117 PPARG JASPAR yes 52932536
chr17 6843102 6843112 MZF1 JASPAR yes 21190768
chr17 6843102 6843112 MZF1 JASPAR yes 52932537
chr17 6843116 6843132 SOX8 JASPAR yes 21190769
chr17 6843116 6843132 SOX8 JASPAR yes 52932538
chr17 6843128 6843140 IRF1 JASPAR yes 21190770
chr17 6843128 6843140 IRF1 JASPAR yes 52932539
chr17 6843152 6843162 NFIA JASPAR yes 21190771
chr17 6843152 6843162 NFIA JASPAR yes 52932540
chr17 6843153 6843162 NFIX JASPAR yes 21190772
chr17 6843153 6843162 NFIX JASPAR yes 52932541
chr17 6843154 6843160 NFIC JASPAR yes 21190773
chr17 6843154 6843160 NFIC JASPAR yes 52932542
chr17 6843154 6843168 TLX1 JASPAR yes 21190774
chr17 6843154 6843168 TLX1 JASPAR yes 52932543
SNP sites on vista23854[chr17:6842907-6843154]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6842992 rs151203336 A G no 4726660
chr17 6843028 rs537846058 C T no 4726661
chr17 6843116 rs140285500 G A
PPARG SOX8
4726662
Genes possibly regulated by vista23854[chr17:6842907-6843154]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 27486
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 43770
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 27418
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 25399
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 27200
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 25340
chr17 6926339 6933609 + BCL6B ENSG00000161940.6 6926339 0.86 1.0 15335 16815
chr17 6939394 6943440 + SLC16A13 ENSG00000174327.6 6939394 0.93 0.99 15336 3760
Expression level of Genes
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miRNAs possibly regulated by vista23854[chr17:6842907-6843154]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 6920947 6920968 - hsa-miR-195-3p MIMAT0004615 6922977 0.17310344827586208 0.897059 0.676023 657
Expression level of miRNAs
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