EnhancerDB
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  3. vista23855[chr17:6851869-6852198]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23855[chr17:6851869-6852198]
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Tissue distribution of vista23855
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Transcription factor that possibly regulate vista23855[chr17:6851869-6852198]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6851885 6851889 YY1 TRANSFAC yes 21190775
chr17 6851885 6851889 YY1 TRANSFAC yes 52933139
chr17 6851887 6851905 SRF JASPAR yes 21190776
chr17 6851887 6851905 SRF JASPAR yes 52933140
chr17 6851889 6851905 SRF JASPAR yes 21190777
chr17 6851889 6851905 SRF JASPAR yes 52933141
chr17 6851889 6851907 SRF JASPAR yes 21190778
chr17 6851889 6851907 SRF JASPAR yes 52933142
chr17 6851895 6851899 TEAD2 TRANSFAC yes 21190779
chr17 6851895 6851899 TEAD2 TRANSFAC yes 52933143
chr17 6851895 6851900 TBP TRANSFAC yes 21190780
chr17 6851895 6851900 TBP TRANSFAC yes 52933144
chr17 6851899 6851904 ETS2 TRANSFAC yes 21190781
chr17 6851899 6851904 ETS2 TRANSFAC yes 52933145
chr17 6851899 6851909 TEAD4 JASPAR yes 21190782
chr17 6851899 6851909 TEAD4 JASPAR yes 52933146
chr17 6851900 6851911 NFKB1 JASPAR yes 21190783
chr17 6851900 6851911 NFKB1 JASPAR yes 52933147
chr17 6851901 6851911 RELA JASPAR yes 21190784
chr17 6851901 6851911 REL JASPAR yes 21190785
chr17 6851901 6851911 RELA JASPAR yes 52933148
chr17 6851901 6851911 REL JASPAR yes 52933149
chr17 6851903 6851913 NFATC3 JASPAR yes 21190786
chr17 6851903 6851913 NFATC3 JASPAR yes 52933150
chr17 6851915 6851919 TEAD2 TRANSFAC yes 21190787
chr17 6851915 6851919 TEAD2 TRANSFAC yes 52933151
chr17 6851917 6851920 MYB TRANSFAC yes 21190788
chr17 6851917 6851920 MYB TRANSFAC yes 52933152
chr17 6851919 6851932 SCRT2 JASPAR yes 21190789
chr17 6851919 6851932 SCRT2 JASPAR yes 52933153
chr17 6851941 6851945 YY1 TRANSFAC yes 21190790
chr17 6851941 6851945 YY1 TRANSFAC yes 52933154
chr17 6851947 6851961 CREB3 JASPAR yes 21190791
chr17 6851947 6851961 CREB3L1 JASPAR yes 21190792
chr17 6851947 6851961 CREB3 JASPAR yes 52933155
chr17 6851947 6851961 CREB3L1 JASPAR yes 52933156
chr17 6851948 6851958 MAX JASPAR yes 21190793
chr17 6851948 6851958 MAX JASPAR yes 52933157
chr17 6851948 6851959 USF1 JASPAR yes 21190794
chr17 6851948 6851959 USF2 JASPAR yes 21190795
chr17 6851948 6851959 USF1 JASPAR yes 52933158
chr17 6851948 6851959 USF2 JASPAR yes 52933159
chr17 6851948 6851960 HES5 JASPAR yes 21190796
chr17 6851948 6851960 HES5 JASPAR yes 52933160
chr17 6851949 6851959 HEY1 JASPAR yes 21190797
chr17 6851949 6851959 HEY2 JASPAR yes 21190798
chr17 6851949 6851959 MAX JASPAR yes 21190799
chr17 6851949 6851959 MNT JASPAR yes 21190800
chr17 6851949 6851959 TFE3 JASPAR yes 21190801
chr17 6851949 6851959 TFEB JASPAR yes 21190802
chr17 6851949 6851959 HEY1 JASPAR yes 52933161
chr17 6851949 6851959 HEY2 JASPAR yes 52933162
chr17 6851949 6851959 MAX JASPAR yes 52933163
chr17 6851949 6851959 MNT JASPAR yes 52933164
chr17 6851949 6851959 TFE3 JASPAR yes 52933165
chr17 6851949 6851959 TFEB JASPAR yes 52933166
chr17 6851949 6851960 USF1 JASPAR yes 21190803
chr17 6851949 6851960 USF2 JASPAR yes 21190804
chr17 6851949 6851960 USF1 JASPAR yes 52933167
chr17 6851949 6851960 USF2 JASPAR yes 52933168
chr17 6851950 6851957 USF1 JASPAR yes 21190805
chr17 6851950 6851957 USF1 JASPAR yes 52933169
chr17 6851950 6851960 MAX JASPAR yes 21190806
chr17 6851950 6851960 MAX JASPAR yes 52933170
chr17 6851951 6851956 MYC TRANSFAC yes 21190807
chr17 6851951 6851956 USF1 TRANSFAC yes 21190808
chr17 6851951 6851956 USF2 TRANSFAC yes 21190809
chr17 6851951 6851956 MYC TRANSFAC yes 52933171
chr17 6851951 6851956 USF1 TRANSFAC yes 52933172
chr17 6851951 6851956 USF2 TRANSFAC yes 52933173
chr17 6851951 6851958 USF1 JASPAR yes 21190810
chr17 6851951 6851958 USF1 JASPAR yes 52933174
chr17 6851959 6851970 FOXH1 JASPAR yes 21190811
chr17 6851959 6851970 FOXH1 JASPAR yes 52933175
chr17 6851965 6851985 RREB1 JASPAR yes 21190812
chr17 6851965 6851985 RREB1 JASPAR yes 52933176
chr17 6851967 6851985 ESR1 JASPAR yes 21190813
chr17 6851967 6851985 ESR1 JASPAR yes 52933177
chr17 6852024 6852039 FOXP1 JASPAR yes 21190814
chr17 6852024 6852039 FOXP1 JASPAR yes 52933178
chr17 6852027 6852038 FOXP2 JASPAR yes 21190815
chr17 6852027 6852038 FOXP2 JASPAR yes 52933179
chr17 6852063 6852077 SPI1 JASPAR yes 21190816
chr17 6852063 6852077 SPI1 JASPAR yes 52933180
chr17 6852067 6852074 SPIB JASPAR yes 21190817
chr17 6852067 6852074 SPIB JASPAR yes 52933181
chr17 6852078 6852094 SOX4 JASPAR yes 21190818
chr17 6852078 6852094 SOX4 JASPAR yes 52933182
chr17 6852081 6852086 ETS2 TRANSFAC yes 21190819
chr17 6852081 6852086 ETS2 TRANSFAC yes 52933183
chr17 6852081 6852089 FEV JASPAR yes 21190820
chr17 6852081 6852089 FEV JASPAR yes 52933184
chr17 6852091 6852103 HNF1B JASPAR yes 21190821
chr17 6852091 6852103 HNF1B JASPAR yes 52933185
chr17 6852093 6852106 ELF1 JASPAR yes 21190822
chr17 6852093 6852106 ELF1 JASPAR yes 52933186
chr17 6852095 6852106 ETV2 JASPAR yes 21190823
chr17 6852095 6852106 ETV2 JASPAR yes 52933187
chr17 6852096 6852106 ERF JASPAR yes 21190824
chr17 6852096 6852106 ERG JASPAR yes 21190825
chr17 6852096 6852106 ETS1 JASPAR yes 21190826
chr17 6852096 6852106 FEV JASPAR yes 21190827
chr17 6852096 6852106 FLI1 JASPAR yes 21190828
chr17 6852096 6852106 ERF JASPAR yes 52933188
chr17 6852096 6852106 ERG JASPAR yes 52933189
chr17 6852096 6852106 ETS1 JASPAR yes 52933190
chr17 6852096 6852106 FEV JASPAR yes 52933191
chr17 6852096 6852106 FLI1 JASPAR yes 52933192
chr17 6852096 6852107 ELK4 JASPAR yes 21190829
chr17 6852096 6852107 FLI1 JASPAR yes 21190830
chr17 6852096 6852107 ELK4 JASPAR yes 52933193
chr17 6852096 6852107 FLI1 JASPAR yes 52933194
chr17 6852097 6852105 FEV JASPAR yes 21190831
chr17 6852097 6852105 FEV JASPAR yes 52933195
chr17 6852102 6852112 NFATC3 JASPAR yes 21190832
chr17 6852102 6852112 NFATC3 JASPAR yes 52933196
chr17 6852104 6852111 NFATC2 JASPAR yes 21190833
chr17 6852104 6852111 NFATC2 JASPAR yes 52933197
chr17 6852122 6852128 HiNF-A TRANSFAC yes 21190834
chr17 6852122 6852128 HiNF-A TRANSFAC yes 52933198
chr17 6852131 6852141 SREBF2 JASPAR yes 21190835
chr17 6852131 6852141 SREBF2 JASPAR yes 52933199
chr17 6852133 6852151 RARA JASPAR yes 21190836
chr17 6852133 6852151 RARA JASPAR yes 52933200
chr17 6852135 6852150 JUND JASPAR yes 21190837
chr17 6852135 6852150 JUND JASPAR yes 52933201
chr17 6852136 6852149 JUN JASPAR yes 21190838
chr17 6852136 6852149 JUN JASPAR yes 52933202
chr17 6852142 6852159 RARA JASPAR yes 21190839
chr17 6852142 6852159 RARA JASPAR yes 52933203
chr17 6852192 6852205 NR2F1 JASPAR yes 21190840
chr17 6852192 6852205 NR2F1 JASPAR yes 52933204
chr17 6852196 6852200 ESR1 TRANSFAC yes 21190841
chr17 6852196 6852200 ESR1 TRANSFAC yes 52933205
SNP sites on vista23855[chr17:6851869-6852198]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6852136 rs138693095 G A
JUN JUND RARA SREBF2
4726700
chr17 6852158 rs539079498 C T
RARA
4726701
Genes possibly regulated by vista23855[chr17:6851869-6852198]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 36530
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 52814
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 36462
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 34443
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 36244
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 34384
chr17 6926339 6933609 + BCL6B ENSG00000161940.6 6926339 0.86 1.0 15335 25859
chr17 6939394 6943440 + SLC16A13 ENSG00000174327.6 6939394 0.93 0.99 15336 12804
chr17 6944949 6947242 - SLC16A11 ENSG00000174326.7 6947242 0.93 0.92 15337 4956
Expression level of Genes
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miRNAs possibly regulated by vista23855[chr17:6851869-6852198]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 6920947 6920968 - hsa-miR-195-3p MIMAT0004615 6922977 0.19945221228464674 0.897059 0.676023 657
Expression level of miRNAs
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