EnhancerDB
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  3. vista23856[chr17:6897797-6898308]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23856[chr17:6897797-6898308]
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Tissue distribution of vista23856
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Transcription factor that possibly regulate vista23856[chr17:6897797-6898308]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6897843 6897863 PPARG JASPAR yes 21190842
chr17 6897854 6897857 MYB TRANSFAC yes 21190843
chr17 6897869 6897884 HNF4G JASPAR yes 21190844
chr17 6897873 6897884 NFKB1 JASPAR yes 21190845
chr17 6897888 6897898 MEF2A JASPAR yes 21190846
chr17 6897912 6897924 YY1 JASPAR yes 21190847
chr17 6897917 6897921 YY1 TRANSFAC yes 21190848
chr17 6897918 6897928 HOXB13 JASPAR yes 21190849
chr17 6897919 6897931 FOXI1 JASPAR yes 21190850
chr17 6897920 6897934 POU1F1 JASPAR yes 21190851
chr17 6897921 6897934 POU3F3 JASPAR yes 21190852
chr17 6897922 6897926 YY1 TRANSFAC yes 21190853
chr17 6897927 6897932 GATA2 JASPAR yes 21190854
chr17 6897936 6897951 ESR2 JASPAR yes 21190855
chr17 6897939 6897949 SREBF1 JASPAR yes 21190856
chr17 6897939 6897949 SREBF2 JASPAR yes 21190857
chr17 6897945 6897957 INSM1 JASPAR yes 21190858
chr17 6897968 6897973 TFAP2A TRANSFAC yes 21190859
chr17 6897968 6897974 MZF1 JASPAR yes 21190860
chr17 6897979 6897990 YY2 JASPAR yes 21190861
chr17 6898005 6898012 PEA3 TRANSFAC yes 21190862
chr17 6898030 6898044 GATA2 JASPAR yes 21190863
chr17 6898032 6898040 GATA3 JASPAR yes 21190864
chr17 6898032 6898040 GATA5 JASPAR yes 21190865
chr17 6898046 6898051 MYB TRANSFAC yes 21190866
chr17 6898058 6898071 SMAD2 JASPAR yes 21190867
chr17 6898070 6898085 FOXP1 JASPAR yes 21190868
chr17 6898071 6898083 FOXC2 JASPAR yes 21190869
chr17 6898072 6898083 FOXC1 JASPAR yes 21190870
chr17 6898072 6898093 IRF1 JASPAR yes 21190871
chr17 6898073 6898077 YY1 TRANSFAC yes 21190872
chr17 6898074 6898089 FOXP1 JASPAR yes 21190873
chr17 6898077 6898092 MEF2A JASPAR yes 21190874
chr17 6898078 6898093 FOXP1 JASPAR yes 21190875
chr17 6898078 6898093 MEF2C JASPAR yes 21190876
chr17 6898079 6898091 FOXC2 JASPAR yes 21190877
chr17 6898079 6898091 MEF2A JASPAR yes 21190878
chr17 6898079 6898091 MEF2B JASPAR yes 21190879
chr17 6898079 6898091 MEF2D JASPAR yes 21190880
chr17 6898080 6898090 MEF2A JASPAR yes 21190881
chr17 6898081 6898085 YY1 TRANSFAC yes 21190882
chr17 6898082 6898098 POU4F3 JASPAR yes 21190883
chr17 6898083 6898098 FOXA1 JASPAR yes 21190884
chr17 6898084 6898096 FOXI1 JASPAR yes 21190885
chr17 6898084 6898098 POU4F1 JASPAR yes 21190886
chr17 6898084 6898099 FOXP1 JASPAR yes 21190887
chr17 6898084 6898099 HNF1A JASPAR yes 21190888
chr17 6898085 6898097 FOXC2 JASPAR yes 21190889
chr17 6898085 6898099 ONECUT2 JASPAR yes 21190890
chr17 6898085 6898099 ONECUT3 JASPAR yes 21190891
chr17 6898086 6898097 FOXB1 JASPAR yes 21190892
chr17 6898086 6898097 FOXC1 JASPAR yes 21190893
chr17 6898086 6898097 PROP1 JASPAR yes 21190894
chr17 6898086 6898102 POU4F2 JASPAR yes 21190895
chr17 6898086 6898102 POU4F3 JASPAR yes 21190896
chr17 6898087 6898091 YY1 TRANSFAC yes 21190897
chr17 6898087 6898102 FOXA1 JASPAR yes 21190898
chr17 6898088 6898100 FOXI1 JASPAR yes 21190899
chr17 6898088 6898102 POU4F1 JASPAR yes 21190900
chr17 6898088 6898103 FOXP1 JASPAR yes 21190901
chr17 6898088 6898103 HNF1A JASPAR yes 21190902
chr17 6898089 6898101 FOXC2 JASPAR yes 21190903
chr17 6898089 6898103 ONECUT2 JASPAR yes 21190904
chr17 6898089 6898103 ONECUT3 JASPAR yes 21190905
chr17 6898090 6898101 FOXB1 JASPAR yes 21190906
chr17 6898090 6898101 FOXC1 JASPAR yes 21190907
chr17 6898090 6898101 PROP1 JASPAR yes 21190908
chr17 6898090 6898106 POU4F2 JASPAR yes 21190909
chr17 6898090 6898106 POU4F3 JASPAR yes 21190910
chr17 6898091 6898095 YY1 TRANSFAC yes 21190911
chr17 6898091 6898106 FOXA1 JASPAR yes 21190912
chr17 6898092 6898104 FOXI1 JASPAR yes 21190913
chr17 6898092 6898106 POU4F1 JASPAR yes 21190914
chr17 6898092 6898107 FOXP1 JASPAR yes 21190915
chr17 6898092 6898107 HNF1A JASPAR yes 21190916
chr17 6898093 6898105 FOXC2 JASPAR yes 21190917
chr17 6898093 6898107 ONECUT2 JASPAR yes 21190918
chr17 6898093 6898107 ONECUT3 JASPAR yes 21190919
chr17 6898094 6898105 FOXB1 JASPAR yes 21190920
chr17 6898094 6898105 FOXC1 JASPAR yes 21190921
chr17 6898094 6898105 PROP1 JASPAR yes 21190922
chr17 6898095 6898099 YY1 TRANSFAC yes 21190923
chr17 6898095 6898110 FOXA1 JASPAR yes 21190924
chr17 6898096 6898108 FOXI1 JASPAR yes 21190925
chr17 6898096 6898111 FOXP1 JASPAR yes 21190926
chr17 6898097 6898109 FOXC2 JASPAR yes 21190927
chr17 6898097 6898111 FOXF2 JASPAR yes 21190928
chr17 6898097 6898111 ONECUT2 JASPAR yes 21190929
chr17 6898097 6898111 ONECUT3 JASPAR yes 21190930
chr17 6898098 6898109 FOXB1 JASPAR yes 21190931
chr17 6898098 6898109 FOXC1 JASPAR yes 21190932
chr17 6898099 6898103 YY1 TRANSFAC yes 21190933
chr17 6898099 6898114 MEF2A JASPAR yes 21190934
chr17 6898100 6898115 MEF2C JASPAR yes 21190935
chr17 6898103 6898107 YY1 TRANSFAC yes 21190936
chr17 6898111 6898117 GATA3 JASPAR yes 21190937
chr17 6898111 6898129 NR3C1 JASPAR yes 21190938
chr17 6898135 6898145 SP1 JASPAR yes 21190939
chr17 6898137 6898142 SP1 TRANSFAC yes 21190940
chr17 6898138 6898143 SP1 TRANSFAC yes 21190941
chr17 6898138 6898144 SP1 TRANSFAC yes 21190942
chr17 6898192 6898196 YY1 TRANSFAC yes 21190943
chr17 6898224 6898227 MYB TRANSFAC yes 21190944
chr17 6898259 6898265 ZNF354C JASPAR yes 21190945
chr17 6898273 6898285 POU3F1 JASPAR yes 21190946
chr17 6898273 6898286 POU2F2 JASPAR yes 21190947
chr17 6898280 6898284 TEAD2 TRANSFAC yes 21190948
chr17 6898290 6898296 JUN TRANSFAC yes 21190949
SNP sites on vista23856[chr17:6897797-6898308]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6897843 rs3840880 TC T
PPARG
4726901
chr17 6898097 rs113921234 A AT
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXI1 FOXP1 HNF1A ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1 YY1
4726902
chr17 6898097 rs566537966 A AT
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXI1 FOXP1 HNF1A ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1 YY1
4726903
chr17 6898101 rs200918952 A AT
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXI1 FOXP1 HNF1A MEF2A MEF2C ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1 YY1
4726904
chr17 6898101 rs61313131 A T
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXI1 FOXP1 HNF1A MEF2A MEF2C ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1 YY1
4726905
chr17 6898105 rs57951679 A T
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXI1 FOXP1 HNF1A MEF2A MEF2C ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1 YY1
4726906
chr17 6898142 rs565104115 G A
SP1
4726907
chr17 6898144 rs116495644 G A
SP1
4726908
chr17 6898235 rs77274470 T G no 4726909
chr17 6898283 rs540324114 TA T
POU2F2 POU3F1 TEAD2
4726910
Genes possibly regulated by vista23856[chr17:6897797-6898308]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 82640
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 98924
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 82572
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 80553
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 82354
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 80494
chr17 6926339 6933609 + BCL6B ENSG00000161940.6 6926339 0.86 1.0 15335 71969
chr17 6939394 6943440 + SLC16A13 ENSG00000174327.6 6939394 0.93 0.99 15336 58914
chr17 6944949 6947242 - SLC16A11 ENSG00000174326.7 6947242 0.93 0.92 15337 51066
chr17 6977856 6983626 - CLEC10A ENSG00000132514.9 6983626 0.75 0.94 15338 14682
Expression level of Genes
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miRNAs possibly regulated by vista23856[chr17:6897797-6898308]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results