EnhancerDB
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  3. vista23858[chr17:6925152-6925653]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23858[chr17:6925152-6925653]
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Tissue distribution of vista23858
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Transcription factor that possibly regulate vista23858[chr17:6925152-6925653]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6925294 6925890 CTCF UCSC Txn Factor no Conserved 108233595
chr17 6925332 6925606 SMC3 UCSC Txn Factor no Conserved 108233607
chr17 6925338 6925602 RAD21 UCSC Txn Factor no Conserved 108233609
chr17 6925530 6925951 RELA UCSC Txn Factor no Conserved 108233635
chr17 6925635 6925852 EGR1 UCSC Txn Factor no Conserved 108233641
chr17 6925165 6925175 RELA JASPAR yes 21190967
chr17 6925165 6925176 NFKB1 JASPAR yes 21190968
chr17 6925182 6925186 H4TF2 TRANSFAC yes 21190969
chr17 6925201 6925211 SP1 JASPAR yes 21190970
chr17 6925217 6925235 E2F3 JASPAR yes 21190971
chr17 6925218 6925234 E2F2 JASPAR yes 21190972
chr17 6925228 6925233 H4TF1 TRANSFAC yes 21190973
chr17 6925228 6925241 EOMES JASPAR yes 21190974
chr17 6925230 6925240 TBR1 JASPAR yes 21190975
chr17 6925230 6925241 TBX20 JASPAR yes 21190976
chr17 6925230 6925241 TBX2 JASPAR yes 21190977
chr17 6925231 6925241 TBX21 JASPAR yes 21190978
chr17 6925251 6925266 TFAP2A JASPAR yes 21190979
chr17 6925251 6925266 TFAP2C JASPAR yes 21190980
chr17 6925253 6925268 TFAP2C JASPAR yes 21190981
chr17 6925254 6925265 TFAP2A JASPAR yes 21190982
chr17 6925254 6925265 TFAP2B JASPAR yes 21190983
chr17 6925254 6925265 TFAP2C JASPAR yes 21190984
chr17 6925254 6925266 TFAP2A JASPAR yes 21190985
chr17 6925254 6925266 TFAP2B JASPAR yes 21190986
chr17 6925254 6925266 TFAP2C JASPAR yes 21190987
chr17 6925258 6925268 MZF1 JASPAR yes 21190988
chr17 6925261 6925274 NFKB2 JASPAR yes 21190989
chr17 6925262 6925272 NFKB1 JASPAR yes 21190990
chr17 6925262 6925273 NFKB1 JASPAR yes 21190991
chr17 6925263 6925273 NFKB1 JASPAR yes 21190992
chr17 6925263 6925273 RELA JASPAR yes 21190993
chr17 6925263 6925273 REL JASPAR yes 21190994
chr17 6925283 6925286 MYB TRANSFAC yes 21190995
chr17 6925298 6925303 SP1 TRANSFAC yes 21190996
chr17 6925313 6925319 SP1 TRANSFAC yes 21190997
chr17 6925377 6925382 SP1 TRANSFAC yes 21190998
chr17 6925422 6925436 MTF1 JASPAR yes 21190999
chr17 6925462 6925481 CTCF JASPAR yes 21191000
chr17 6925464 6925469 SP1 TRANSFAC yes 21191001
chr17 6925464 6925470 SP1 TRANSFAC yes 21191002
chr17 6925464 6925471 SP1 TRANSFAC yes 21191003
chr17 6925508 6925519 E2F1 JASPAR yes 21191004
chr17 6925557 6925562 SP1 TRANSFAC yes 21191005
chr17 6925558 6925563 SP1 TRANSFAC yes 21191006
chr17 6925559 6925570 NRF1 JASPAR yes 21191007
chr17 6925561 6925576 TFAP2A JASPAR yes 21191008
chr17 6925564 6925575 TFAP2A JASPAR yes 21191009
chr17 6925564 6925575 TFAP2B JASPAR yes 21191010
chr17 6925564 6925575 TFAP2C JASPAR yes 21191011
chr17 6925565 6925574 TFAP2A JASPAR yes 21191012
chr17 6925569 6925587 ESR1 JASPAR yes 21191013
chr17 6925579 6925600 ZNF263 JASPAR yes 21191014
chr17 6925585 6925602 BCL6B JASPAR yes 21191015
chr17 6925587 6925592 NFY TRANSFAC yes 21191016
chr17 6925588 6925600 E2F8 JASPAR yes 21191017
chr17 6925609 6925623 E2F7 JASPAR yes 21191018
chr17 6925610 6925622 E2F8 JASPAR yes 21191019
chr17 6925612 6925617 SP1 TRANSFAC yes 21191020
chr17 6925612 6925623 E2F4 JASPAR yes 21191021
chr17 6925612 6925623 E2F6 JASPAR yes 21191022
chr17 6925613 6925618 SP1 TRANSFAC yes 21191023
SNP sites on vista23858[chr17:6925152-6925653]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6925152 rs548974500 T C no 4727029
chr17 6925264 rs527954959 G A
MZF1 NFKB1 NFKB2 REL RELA TFAP2A TFAP2B TFAP2C
4727030
chr17 6925433 rs548030834 G A
CTCF MTF1 RAD21 SMC3
4727031
chr17 6925578 rs570977012 C G
CTCF ESR1 RAD21 RELA SMC3
4727032
Genes possibly regulated by vista23858[chr17:6925152-6925653]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 90516
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 74232
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 90584
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 92603
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 90802
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 92662
chr17 6926339 6933609 + BCL6B ENSG00000161940.6 6926339 0.86 1.0 15335 99314
chr17 6939394 6943440 + SLC16A13 ENSG00000174327.6 6939394 0.93 0.99 15336 86259
chr17 6944949 6947242 - SLC16A11 ENSG00000174326.7 6947242 0.93 0.92 15337 78411
chr17 6977856 6983626 - CLEC10A ENSG00000132514.9 6983626 0.75 0.94 15338 42027
chr17 7004641 7019019 - ASGR2 ENSG00000161944.12 7019019 1.0 1.0 15339 6634
Expression level of Genes
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miRNAs possibly regulated by vista23858[chr17:6925152-6925653]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results