EnhancerDB
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  3. vista23860[chr17:6950063-6950446]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23860[chr17:6950063-6950446]
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Tissue distribution of vista23860
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Transcription factor that possibly regulate vista23860[chr17:6950063-6950446]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6950202 6950475 USF1 UCSC Txn Factor no Conserved 108233685
chr17 6950263 6950546 MAFK UCSC Txn Factor no Conserved 108233698
chr17 6950085 6950098 TFAP2A JASPAR yes 21191048
chr17 6950085 6950098 TFAP2B JASPAR yes 21191049
chr17 6950085 6950098 TFAP2C JASPAR yes 21191050
chr17 6950092 6950108 ZNF143 JASPAR yes 21191051
chr17 6950100 6950105 SP1 TRANSFAC yes 21191052
chr17 6950103 6950116 NFKB2 JASPAR yes 21191053
chr17 6950106 6950114 FOXO3 JASPAR yes 21191054
chr17 6950133 6950144 DMRT3 JASPAR yes 21191055
chr17 6950137 6950140 MYB TRANSFAC yes 21191056
chr17 6950162 6950168 GATA3 JASPAR yes 21191057
chr17 6950182 6950197 RFX5 JASPAR yes 21191058
chr17 6950215 6950225 ETV3 JASPAR yes 21191059
chr17 6950246 6950258 FOXI1 JASPAR yes 21191060
chr17 6950249 6950253 YY1 TRANSFAC yes 21191061
chr17 6950249 6950259 HOXA13 JASPAR yes 21191062
chr17 6950249 6950259 HOXB13 JASPAR yes 21191063
chr17 6950249 6950259 HOXD13 JASPAR yes 21191064
chr17 6950249 6950260 HOXA10 JASPAR yes 21191065
chr17 6950250 6950259 CDX1 JASPAR yes 21191066
chr17 6950250 6950261 CDX2 JASPAR yes 21191067
chr17 6950270 6950280 SP1 JASPAR yes 21191068
chr17 6950271 6950281 SP1 JASPAR yes 21191069
chr17 6950271 6950292 ZNF263 JASPAR yes 21191070
chr17 6950272 6950276 LFA1 TRANSFAC yes 21191071
chr17 6950283 6950293 MZF1 JASPAR yes 21191072
chr17 6950320 6950334 CREB3 JASPAR yes 21191073
chr17 6950321 6950331 MAX JASPAR yes 21191074
chr17 6950321 6950332 USF1 JASPAR yes 21191075
chr17 6950321 6950332 USF2 JASPAR yes 21191076
chr17 6950322 6950332 BHLHE40 JASPAR yes 21191077
chr17 6950322 6950332 BHLHE41 JASPAR yes 21191078
chr17 6950322 6950332 MLXIPL JASPAR yes 21191079
chr17 6950322 6950332 MLX JASPAR yes 21191080
chr17 6950322 6950332 SREBF1 JASPAR yes 21191081
chr17 6950322 6950332 SREBF2 JASPAR yes 21191082
chr17 6950322 6950332 TFE3 JASPAR yes 21191083
chr17 6950322 6950332 TFEB JASPAR yes 21191084
chr17 6950322 6950332 TFEC JASPAR yes 21191085
chr17 6950322 6950333 USF1 JASPAR yes 21191086
chr17 6950322 6950333 USF2 JASPAR yes 21191087
chr17 6950323 6950333 MAX JASPAR yes 21191088
chr17 6950324 6950329 MYC TRANSFAC yes 21191089
chr17 6950324 6950329 USF1 TRANSFAC yes 21191090
chr17 6950324 6950329 USF2 TRANSFAC yes 21191091
chr17 6950340 6950346 MAZ TRANSFAC yes 21191092
chr17 6950385 6950395 BHLHE22 JASPAR yes 21191093
chr17 6950390 6950395 ATF1 TRANSFAC yes 21191094
chr17 6950392 6950403 NRL JASPAR yes 21191095
chr17 6950412 6950426 GATA2 JASPAR yes 21191096
chr17 6950414 6950420 GATA1 TRANSFAC yes 21191097
chr17 6950414 6950422 GATA5 JASPAR yes 21191098
chr17 6950421 6950435 TCF7L2 JASPAR yes 21191099
chr17 6950421 6950436 LEF1 JASPAR yes 21191100
SNP sites on vista23860[chr17:6950063-6950446]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6950065 rs191858127 G C no 4727168
chr17 6950066 rs183417336 C T no 4727169
chr17 6950249 rs556752396 A G
FOXI1 HOXA10 HOXA13 HOXB13 HOXD13 USF1 YY1
4727170
chr17 6950256 rs11078664 T C
CDX1 CDX2 FOXI1 HOXA10 HOXA13 HOXB13 HOXD13 USF1
4727171
chr17 6950281 rs377029592 T G
MAFK SP1 USF1 ZNF263
4727172
chr17 6950323 rs142257238 G C
BHLHE40 BHLHE41 CREB3 MAFK MAX MLX MLXIPL SREBF1 SREBF2 TFE3 TFEB TFEC USF1 USF2
4727173
chr17 6950341 rs540983258 G A,T
MAFK MAZ USF1
4727174
chr17 6950343 rs535722039 GA G
MAFK MAZ USF1
4727175
chr17 6950348 rs151241685 C T
MAFK USF1
4727176
chr17 6950378 rs400647 C G
MAFK USF1
4727177
Genes possibly regulated by vista23860[chr17:6950063-6950446]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 65605
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 49321
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 65673
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 67692
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 65891
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 67751
chr17 6926339 6933609 + BCL6B ENSG00000161940.6 6926339 0.86 1.0 15335 76276
chr17 6939394 6943440 + SLC16A13 ENSG00000174327.6 6939394 0.93 0.99 15336 89331
chr17 6944949 6947242 - SLC16A11 ENSG00000174326.7 6947242 0.93 0.92 15337 97179
chr17 6977856 6983626 - CLEC10A ENSG00000132514.9 6983626 0.75 0.94 15338 66820
chr17 7004641 7019019 - ASGR2 ENSG00000161944.12 7019019 1.0 1.0 15339 31427
Expression level of Genes
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miRNAs possibly regulated by vista23860[chr17:6950063-6950446]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results