EnhancerDB
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  3. vista23862[chr17:6962456-6962610]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23862[chr17:6962456-6962610]
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Tissue distribution of vista23862
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Transcription factor that possibly regulate vista23862[chr17:6962456-6962610]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6962467 6962472 ETS2 TRANSFAC yes 21191127
chr17 6962467 6962472 ETS2 TRANSFAC yes 52936496
chr17 6962477 6962497 TP63 JASPAR yes 21191128
chr17 6962477 6962497 TP63 JASPAR yes 52936497
chr17 6962478 6962496 TP73 JASPAR yes 21191129
chr17 6962478 6962496 TP73 JASPAR yes 52936498
chr17 6962502 6962517 FOXA1 JASPAR yes 21191130
chr17 6962502 6962517 FOXA1 JASPAR yes 52936499
chr17 6962506 6962510 YY1 TRANSFAC yes 21191131
chr17 6962506 6962510 YY1 TRANSFAC yes 52936500
chr17 6962506 6962517 FOXA1 JASPAR yes 21191132
chr17 6962506 6962517 FOXA1 JASPAR yes 52936501
chr17 6962508 6962526 NFYA JASPAR yes 21191133
chr17 6962508 6962526 NFYA JASPAR yes 52936502
chr17 6962511 6962527 NFYA JASPAR yes 21191134
chr17 6962511 6962527 NFYA JASPAR yes 52936503
chr17 6962514 6962529 NFYB JASPAR yes 21191135
chr17 6962514 6962529 NFYB JASPAR yes 52936504
chr17 6962516 6962521 NFY TRANSFAC yes 21191136
chr17 6962516 6962521 NFY TRANSFAC yes 52936505
chr17 6962540 6962545 H4TF1 TRANSFAC yes 21191137
chr17 6962540 6962545 H4TF1 TRANSFAC yes 52936506
chr17 6962546 6962554 RHOXF1 JASPAR yes 21191138
chr17 6962546 6962554 RHOXF1 JASPAR yes 52936507
chr17 6962546 6962555 PITX3 JASPAR yes 21191139
chr17 6962546 6962555 PITX3 JASPAR yes 52936508
chr17 6962558 6962573 HNF4G JASPAR yes 21191140
chr17 6962558 6962573 NR2C2 JASPAR yes 21191141
chr17 6962558 6962573 HNF4G JASPAR yes 52936509
chr17 6962558 6962573 NR2C2 JASPAR yes 52936510
chr17 6962559 6962573 RXRB JASPAR yes 21191142
chr17 6962559 6962573 RXRG JASPAR yes 21191143
chr17 6962559 6962573 RXRB JASPAR yes 52936511
chr17 6962559 6962573 RXRG JASPAR yes 52936512
chr17 6962559 6962574 HNF4A JASPAR yes 21191144
chr17 6962559 6962574 HNF4A JASPAR yes 52936513
chr17 6962561 6962565 ESR1 TRANSFAC yes 21191145
chr17 6962561 6962565 ESR1 TRANSFAC yes 52936514
chr17 6962566 6962585 PAX5 JASPAR yes 21191146
chr17 6962566 6962585 PAX5 JASPAR yes 52936515
chr17 6962568 6962572 LFA1 TRANSFAC yes 21191147
chr17 6962568 6962572 LFA1 TRANSFAC yes 52936516
chr17 6962586 6962601 JUND JASPAR yes 21191148
chr17 6962586 6962601 JUND JASPAR yes 52936517
chr17 6962587 6962600 JUN JASPAR yes 21191149
chr17 6962587 6962600 JUN JASPAR yes 52936518
chr17 6962588 6962602 ATF7 JASPAR yes 21191150
chr17 6962588 6962602 ATF7 JASPAR yes 52936519
chr17 6962589 6962599 RORA JASPAR yes 21191151
chr17 6962589 6962599 RORA JASPAR yes 52936520
chr17 6962589 6962601 JDP2 JASPAR yes 21191152
chr17 6962589 6962601 JDP2 JASPAR yes 52936521
chr17 6962589 6962604 JUND JASPAR yes 21191153
chr17 6962589 6962604 JUND JASPAR yes 52936522
chr17 6962590 6962603 JUN JASPAR yes 21191154
chr17 6962590 6962603 JUN JASPAR yes 52936523
chr17 6962591 6962599 CREB1 JASPAR yes 21191155
chr17 6962591 6962599 CREB1 JASPAR yes 52936524
chr17 6962592 6962600 NR4A2 JASPAR yes 21191156
chr17 6962592 6962600 NR4A2 JASPAR yes 52936525
chr17 6962594 6962598 ESR1 TRANSFAC yes 21191157
chr17 6962594 6962598 ESR1 TRANSFAC yes 52936526
chr17 6962597 6962607 ERF JASPAR yes 21191158
chr17 6962597 6962607 ERF JASPAR yes 52936527
chr17 6962598 6962605 SPI1 JASPAR yes 21191159
chr17 6962598 6962605 SPI1 JASPAR yes 52936528
SNP sites on vista23862[chr17:6962456-6962610]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6962511 rs4796366 T G
FOXA1 NFYA
4727330
Genes possibly regulated by vista23862[chr17:6962456-6962610]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6779954 6915668 - AC027763.2 ENSG00000215067.5 6915668 0.69 0.99 15329 53212
chr17 6899384 6914055 + ALOX12 ENSG00000108839.7 6899384 0.94 1.0 15330 36928
chr17 6915736 6917851 + RNASEK ENSG00000219200.6 6915736 0.8 0.81 15331 53280
chr17 6915928 6917755 - AC040977.1 ENSG00000269871.1 6917755 0.97 1.0 15332 55299
chr17 6915954 6920839 + RNASEK-C17orf49 ENSG00000161939.14 6915954 0.96 0.98 15333 53498
chr17 6917814 6920844 + C17orf49 ENSG00000258315.1 6917814 0.86 0.8 15334 55358
chr17 6926339 6933609 + BCL6B ENSG00000161940.6 6926339 0.86 1.0 15335 63883
chr17 6939394 6943440 + SLC16A13 ENSG00000174327.6 6939394 0.93 0.99 15336 76938
chr17 6944949 6947242 - SLC16A11 ENSG00000174326.7 6947242 0.93 0.92 15337 84786
chr17 6977856 6983626 - CLEC10A ENSG00000132514.9 6983626 0.75 0.94 15338 78984
chr17 7004641 7019019 - ASGR2 ENSG00000161944.12 7019019 1.0 1.0 15339 43591
Expression level of Genes
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miRNAs possibly regulated by vista23862[chr17:6962456-6962610]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results