EnhancerDB
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  3. vista2387[chr1:90137741-90138074]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2387[chr1:90137741-90138074]
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Tissue distribution of vista2387
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Transcription factor that possibly regulate vista2387[chr1:90137741-90138074]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90137706 90138087 EP300 UCSC Txn Factor no Conserved 107813669
chr1 90137726 90138126 FOS UCSC Txn Factor no Conserved 107813671
chr1 90137761 90138060 TCF12 UCSC Txn Factor no Conserved 107813674
chr1 90137765 90138078 FOSL2 UCSC Txn Factor no Conserved 107813677
chr1 90137740 90137744 H1TF2 TRANSFAC yes 30612301
chr1 90137740 90137744 NFE TRANSFAC yes 30612302
chr1 90137740 90137744 SRF TRANSFAC yes 30612303
chr1 90137740 90137744 H1TF2 TRANSFAC yes 118325353
chr1 90137740 90137744 NFE TRANSFAC yes 118325354
chr1 90137740 90137744 SRF TRANSFAC yes 118325355
chr1 90137755 90137758 MYB TRANSFAC yes 30612304
chr1 90137755 90137758 MYB TRANSFAC yes 118325356
chr1 90137801 90137808 SPI1 JASPAR yes 30612305
chr1 90137801 90137808 SPI1 JASPAR yes 118325357
chr1 90137820 90137840 TP63 JASPAR yes 30612306
chr1 90137820 90137840 TP63 JASPAR yes 118325358
chr1 90137825 90137829 H4TF2 TRANSFAC yes 30612307
chr1 90137825 90137829 H4TF2 TRANSFAC yes 118325359
chr1 90137830 90137833 MYB TRANSFAC yes 30612308
chr1 90137830 90137833 MYB TRANSFAC yes 118325360
chr1 90137834 90137854 ESR1 JASPAR yes 30612309
chr1 90137834 90137854 ESR1 JASPAR yes 118325361
chr1 90137837 90137855 ESR2 JASPAR yes 30612310
chr1 90137837 90137855 ESR2 JASPAR yes 118325362
chr1 90137838 90137855 ESR1 JASPAR yes 30612311
chr1 90137838 90137855 ESR1 JASPAR yes 118325363
chr1 90137839 90137843 NFE TRANSFAC yes 30612312
chr1 90137839 90137843 NFE TRANSFAC yes 118325364
chr1 90137839 90137854 ESR2 JASPAR yes 30612313
chr1 90137839 90137854 ESR2 JASPAR yes 118325365
chr1 90137839 90137859 ESR1 JASPAR yes 30612314
chr1 90137839 90137859 ESR1 JASPAR yes 118325366
chr1 90137847 90137861 RORA JASPAR yes 30612315
chr1 90137847 90137861 RORA JASPAR yes 118325367
chr1 90137888 90137898 BARHL2 JASPAR yes 30612316
chr1 90137888 90137898 BARHL2 JASPAR yes 118325368
chr1 90137904 90137913 SOX9 JASPAR yes 30612317
chr1 90137904 90137913 SOX9 JASPAR yes 118325369
chr1 90137904 90137919 FOXA1 JASPAR yes 30612318
chr1 90137904 90137919 FOXA1 JASPAR yes 118325370
chr1 90137905 90137920 FOXP1 JASPAR yes 30612319
chr1 90137905 90137920 FOXP1 JASPAR yes 118325371
chr1 90137906 90137915 SRY JASPAR yes 30612320
chr1 90137906 90137915 SRY JASPAR yes 118325372
chr1 90137906 90137917 FOXP2 JASPAR yes 30612321
chr1 90137906 90137917 FOXP2 JASPAR yes 118325373
chr1 90137906 90137918 FOXC2 JASPAR yes 30612322
chr1 90137906 90137918 FOXC2 JASPAR yes 118325374
chr1 90137906 90137920 FOXF2 JASPAR yes 30612323
chr1 90137906 90137920 FOXF2 JASPAR yes 118325375
chr1 90137907 90137915 FOXD1 JASPAR yes 30612324
chr1 90137907 90137915 FOXG1 JASPAR yes 30612325
chr1 90137907 90137915 FOXO3 JASPAR yes 30612326
chr1 90137907 90137915 FOXD1 JASPAR yes 118325376
chr1 90137907 90137915 FOXG1 JASPAR yes 118325377
chr1 90137907 90137915 FOXO3 JASPAR yes 118325378
chr1 90137908 90137915 FOXD2 JASPAR yes 30612327
chr1 90137908 90137915 FOXI1 JASPAR yes 30612328
chr1 90137908 90137915 FOXL1 JASPAR yes 30612329
chr1 90137908 90137915 FOXO4 JASPAR yes 30612330
chr1 90137908 90137915 FOXO6 JASPAR yes 30612331
chr1 90137908 90137915 FOXP3 JASPAR yes 30612332
chr1 90137908 90137915 FOXD2 JASPAR yes 118325379
chr1 90137908 90137915 FOXI1 JASPAR yes 118325380
chr1 90137908 90137915 FOXL1 JASPAR yes 118325381
chr1 90137908 90137915 FOXO4 JASPAR yes 118325382
chr1 90137908 90137915 FOXO6 JASPAR yes 118325383
chr1 90137908 90137915 FOXP3 JASPAR yes 118325384
chr1 90137908 90137919 FOXA1 JASPAR yes 30612333
chr1 90137908 90137919 FOXA1 JASPAR yes 118325385
chr1 90137914 90137918 NFE TRANSFAC yes 30612334
chr1 90137914 90137918 NFE TRANSFAC yes 118325386
chr1 90137918 90137922 NFE TRANSFAC yes 30612335
chr1 90137918 90137922 NFE TRANSFAC yes 118325387
chr1 90137933 90137947 JUN JASPAR yes 30612336
chr1 90137933 90137947 JUN JASPAR yes 118325388
chr1 90137934 90137948 POU4F1 JASPAR yes 30612337
chr1 90137934 90137948 POU4F1 JASPAR yes 118325389
chr1 90137934 90137950 POU4F2 JASPAR yes 30612338
chr1 90137934 90137950 POU4F3 JASPAR yes 30612339
chr1 90137934 90137950 POU4F2 JASPAR yes 118325390
chr1 90137934 90137950 POU4F3 JASPAR yes 118325391
chr1 90137936 90137947 FOSL2 JASPAR yes 30612340
chr1 90137936 90137947 FOSL2 JASPAR yes 118325392
chr1 90137937 90137948 NFE2 JASPAR yes 30612341
chr1 90137937 90137948 NFE2 JASPAR yes 118325393
chr1 90137938 90137947 JDP2 JASPAR yes 30612342
chr1 90137938 90137947 JDP2 JASPAR yes 118325394
chr1 90137953 90137963 GSC2 JASPAR yes 30612343
chr1 90137953 90137963 GSC JASPAR yes 30612344
chr1 90137953 90137963 GSC2 JASPAR yes 118325395
chr1 90137953 90137963 GSC JASPAR yes 118325396
chr1 90137954 90137962 RHOXF1 JASPAR yes 30612345
chr1 90137954 90137962 RHOXF1 JASPAR yes 118325397
chr1 90137954 90137963 PITX3 JASPAR yes 30612346
chr1 90137954 90137963 PITX3 JASPAR yes 118325398
chr1 90137965 90137971 MYC TRANSFAC yes 30612347
chr1 90137965 90137971 MYC TRANSFAC yes 118325399
chr1 90137967 90137978 FOS JASPAR yes 30612348
chr1 90137967 90137978 FOS JASPAR yes 118325400
chr1 90137967 90137985 MAFF JASPAR yes 30612349
chr1 90137967 90137985 MAFF JASPAR yes 118325401
chr1 90137968 90137979 FOSL2 JASPAR yes 30612350
chr1 90137968 90137979 JUNB JASPAR yes 30612351
chr1 90137968 90137979 FOSL2 JASPAR yes 118325402
chr1 90137968 90137979 JUNB JASPAR yes 118325403
chr1 90137968 90137982 JUN JASPAR yes 30612352
chr1 90137968 90137982 PAX6 JASPAR yes 30612353
chr1 90137968 90137982 JUN JASPAR yes 118325404
chr1 90137968 90137982 PAX6 JASPAR yes 118325405
chr1 90137968 90137983 MAFK JASPAR yes 30612354
chr1 90137968 90137983 MAFK JASPAR yes 118325406
chr1 90137969 90137980 BATF JASPAR yes 30612355
chr1 90137969 90137980 BATF JASPAR yes 118325407
chr1 90137988 90137992 YY1 TRANSFAC yes 30612356
chr1 90137988 90137992 YY1 TRANSFAC yes 118325408
chr1 90137988 90137999 HOXC13 JASPAR yes 30612357
chr1 90137988 90137999 HOXC13 JASPAR yes 118325409
chr1 90137991 90137994 MYB TRANSFAC yes 30612358
chr1 90137991 90137994 MYB TRANSFAC yes 118325410
chr1 90138011 90138017 GATA3 JASPAR yes 30612359
chr1 90138011 90138017 GATA3 JASPAR yes 118325411
chr1 90138020 90138029 POU3F4 JASPAR yes 30612360
chr1 90138020 90138029 POU5F1B JASPAR yes 30612361
chr1 90138020 90138029 POU3F4 JASPAR yes 118325412
chr1 90138020 90138029 POU5F1B JASPAR yes 118325413
chr1 90138027 90138034 NKX3-1 JASPAR yes 30612362
chr1 90138027 90138034 NKX3-1 JASPAR yes 118325414
chr1 90138037 90138051 ONECUT3 JASPAR yes 30612363
chr1 90138037 90138051 ONECUT3 JASPAR yes 118325415
chr1 90138037 90138052 FOXP1 JASPAR yes 30612364
chr1 90138037 90138052 FOXP1 JASPAR yes 118325416
chr1 90138038 90138052 POU4F1 JASPAR yes 30612365
chr1 90138038 90138052 POU4F1 JASPAR yes 118325417
chr1 90138039 90138050 FOXC1 JASPAR yes 30612366
chr1 90138039 90138050 FOXC1 JASPAR yes 118325418
chr1 90138039 90138051 FOXC2 JASPAR yes 30612367
chr1 90138039 90138051 FOXC2 JASPAR yes 118325419
chr1 90138040 90138058 NR3C1 JASPAR yes 30612368
chr1 90138040 90138058 NR3C1 JASPAR yes 118325420
chr1 90138054 90138070 ZNF143 JASPAR yes 30612369
chr1 90138054 90138070 ZNF143 JASPAR yes 118325421
chr1 90138070 90138081 STAT1 JASPAR yes 30612370
chr1 90138070 90138081 STAT3 JASPAR yes 30612371
chr1 90138070 90138081 STAT1 JASPAR yes 118325422
chr1 90138070 90138081 STAT3 JASPAR yes 118325423
SNP sites on vista2387[chr1:90137741-90138074]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90137835 rs6656884 A G
EP300 ESR1 FOS FOSL2 TCF12 TP63
470450
chr1 90137868 rs115063771 A G
EP300 FOS FOSL2 TCF12
470451
chr1 90137905 rs185553626 T A
EP300 FOS FOSL2 FOXA1 FOXP1 SOX9 TCF12
470452
chr1 90137954 rs116730290 G A
EP300 FOS FOSL2 GSC GSC2 PITX3 RHOXF1 TCF12
470453
chr1 90137995 rs2185198 C T
EP300 FOS FOSL2 HOXC13 TCF12
470454
chr1 90138063 rs2185199 C T
EP300 FOS FOSL2 ZNF143
470455
Genes possibly regulated by vista2387[chr1:90137741-90138074]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90098631 90235462 + LRRC8C ENSG00000171488.10 90098631 0.84 0.99 882 60890
chr1 90098699 90398809 + RP11-302M6.4 ENSG00000271949.1 90098699 1.0 1.0 883 60958
Expression level of Genes
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miRNAs possibly regulated by vista2387[chr1:90137741-90138074]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results