EnhancerDB
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  3. vista23871[chr17:7233457-7233867]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23871[chr17:7233457-7233867]
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Tissue distribution of vista23871
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Transcription factor that possibly regulate vista23871[chr17:7233457-7233867]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 7232302 7234141 POLR2A UCSC Txn Factor no Conserved 108234173
chr17 7233361 7233553 NFYB UCSC Txn Factor no Conserved 108234206
chr17 7233649 7233965 EBF1 UCSC Txn Factor no Conserved 108234260
chr17 7233475 7233491 NFYA JASPAR yes 21191556
chr17 7233477 7233497 RREB1 JASPAR yes 21191557
chr17 7233478 7233493 NFYB JASPAR yes 21191558
chr17 7233480 7233485 NFY TRANSFAC yes 21191559
chr17 7233493 7233514 ZNF263 JASPAR yes 21191560
chr17 7233497 7233518 ZNF263 JASPAR yes 21191561
chr17 7233514 7233520 SP1 TRANSFAC yes 21191562
chr17 7233514 7233525 E2F1 JASPAR yes 21191563
chr17 7233515 7233520 SP1 TRANSFAC yes 21191564
chr17 7233515 7233526 E2F4 JASPAR yes 21191565
chr17 7233515 7233526 E2F6 JASPAR yes 21191566
chr17 7233516 7233521 SP1 TRANSFAC yes 21191567
chr17 7233519 7233534 AR JASPAR yes 21191568
chr17 7233536 7233542 SOX10 JASPAR yes 21191569
chr17 7233552 7233557 SP1 TRANSFAC yes 21191570
chr17 7233560 7233566 SOX10 JASPAR yes 21191571
chr17 7233563 7233568 ETS2 TRANSFAC yes 21191572
chr17 7233600 7233610 MEF2A JASPAR yes 21191573
chr17 7233618 7233623 SP1 TRANSFAC yes 21191574
chr17 7233635 7233656 ZNF263 JASPAR yes 21191575
chr17 7233668 7233679 NFKB1 JASPAR yes 21191576
chr17 7233674 7233687 TFAP2A JASPAR yes 21191577
chr17 7233674 7233687 TFAP2C JASPAR yes 21191578
chr17 7233689 7233694 SP1 TRANSFAC yes 21191579
chr17 7233692 7233699 SP1 TRANSFAC yes 21191580
chr17 7233692 7233702 SP1 JASPAR yes 21191581
chr17 7233693 7233701 SP1 TRANSFAC yes 21191582
chr17 7233693 7233702 SP1 TRANSFAC yes 21191583
chr17 7233694 7233699 SP1 TRANSFAC yes 21191584
chr17 7233695 7233700 SP1 TRANSFAC yes 21191585
chr17 7233695 7233701 SP1 TRANSFAC yes 21191586
chr17 7233698 7233703 SP1 TRANSFAC yes 21191587
chr17 7233704 7233714 SP1 JASPAR yes 21191588
chr17 7233705 7233713 SP1 TRANSFAC yes 21191589
chr17 7233705 7233714 SP1 TRANSFAC yes 21191590
chr17 7233706 7233711 SP1 TRANSFAC yes 21191591
chr17 7233707 7233712 SP1 TRANSFAC yes 21191592
chr17 7233707 7233713 SP1 TRANSFAC yes 21191593
chr17 7233729 7233734 SP1 TRANSFAC yes 21191594
chr17 7233730 7233735 SP1 TRANSFAC yes 21191595
chr17 7233734 7233738 ESR1 TRANSFAC yes 21191596
chr17 7233735 7233756 REST JASPAR yes 21191597
chr17 7233754 7233768 GLIS2 JASPAR yes 21191598
chr17 7233764 7233769 SP1 TRANSFAC yes 21191599
chr17 7233782 7233796 PLAG1 JASPAR yes 21191600
chr17 7233783 7233797 EBF1 JASPAR yes 21191601
chr17 7233784 7233795 EBF1 JASPAR yes 21191602
chr17 7233785 7233796 EBF1 JASPAR yes 21191603
chr17 7233811 7233824 NFKB1 JASPAR yes 21191604
chr17 7233811 7233824 NFKB2 JASPAR yes 21191605
chr17 7233812 7233822 RELA JASPAR yes 21191606
chr17 7233812 7233823 NFKB1 JASPAR yes 21191607
chr17 7233813 7233823 NFKB1 JASPAR yes 21191608
chr17 7233813 7233823 RELA JASPAR yes 21191609
chr17 7233818 7233831 TFAP2A JASPAR yes 21191610
chr17 7233818 7233831 TFAP2B JASPAR yes 21191611
chr17 7233818 7233831 TFAP2C JASPAR yes 21191612
chr17 7233819 7233830 EBF1 JASPAR yes 21191613
chr17 7233828 7233832 LFA1 TRANSFAC yes 21191614
chr17 7233841 7233858 RARA JASPAR yes 21191615
chr17 7233842 7233851 THAP1 JASPAR yes 21191616
chr17 7233842 7233853 GCM1 JASPAR yes 21191617
chr17 7233853 7233857 ESR1 TRANSFAC yes 21191618
SNP sites on vista23871[chr17:7233457-7233867]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 7233669 rs117017702 C G
EBF1 NFKB1 POLR2A
4729303
chr17 7233713 rs9891479 G A,C
EBF1 POLR2A SP1
4729304
chr17 7233719 rs3809820 G A
EBF1 POLR2A
4729305
chr17 7233754 rs3809821 A G
EBF1 GLIS2 POLR2A REST
4729306
chr17 7233755 rs187129635 G T
EBF1 GLIS2 POLR2A REST
4729307
chr17 7233788 rs60279908 C T
EBF1 PLAG1 POLR2A
4729308
chr17 7233822 rs55933403 C G
EBF1 NFKB1 NFKB2 POLR2A RELA TFAP2A TFAP2B TFAP2C
4729309
Genes possibly regulated by vista23871[chr17:7233457-7233867]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7128660 7137864 - DVL2 ENSG00000004975.7 7137864 0.69 1.0 15343 4407
chr17 7138347 7143041 - PHF23 ENSG00000040633.8 7143041 0.61 0.99 15344 9584
chr17 7143333 7146089 - GABARAP ENSG00000170296.5 7146089 0.6 0.91 15345 12632
chr17 7143746 7147954 - CTD-2545G14.7 ENSG00000262526.2 7147954 0.96 0.95 15346 14497
chr17 7146910 7155810 - CTDNEP1 ENSG00000175826.7 7155810 0.55 0.99 15347 22353
chr17 7150148 7165408 - RP1-4G17.5 ENSG00000262302.1 7165408 1.0 1.0 15348 31951
chr17 7154735 7163259 + ELP5 ENSG00000170291.10 7154735 0.72 1.0 15349 21278
chr17 7163222 7167302 - CLDN7 ENSG00000181885.14 7167302 0.82 1.0 15350 33845
chr17 7184986 7191576 + SLC2A4 ENSG00000181856.10 7184986 0.94 1.0 15351 51529
chr17 7191571 7197934 - YBX2 ENSG00000006047.8 7197934 0.88 1.0 15352 64477
chr17 7210318 7215774 + EIF5A ENSG00000132507.13 7210318 0.84 0.99 15353 76861
chr17 7214643 7218883 - GPS2 ENSG00000132522.11 7218883 0.57 1.0 15354 85426
chr17 7215980 7222493 - RP11-542C16.2 ENSG00000261915.2 7222493 0.89 0.94 15355 89036
chr17 7218947 7232712 - NEURL4 ENSG00000215041.5 7232712 0.63 1.0 15356 99255
chr17 7239848 7254797 + ACAP1 ENSG00000072818.7 7239848 0.89 1.0 15357 94019
chr17 7255208 7258258 + KCTD11 ENSG00000213859.3 7255208 0.72 1.0 15358 78659
chr17 7258442 7260538 + TMEM95 ENSG00000182896.8 7258442 0.86 0.0 15359 75425
chr17 7283853 7293093 + TNK1 ENSG00000174292.8 7283853 0.64 1.0 15360 50014
chr17 7293046 7307416 - TMEM256-PLSCR3 ENSG00000187838.12 7307416 0.61 0.73 15361 26451
chr17 7293053 7307416 - C17orf61-PLSCR3 ENSG00000262481.1 7307416 0.91 0.92 15362 26451
chr17 7306294 7307456 - TMEM256 ENSG00000205544.3 7307456 0.61 0.95 15363 26411
chr17 7308193 7323179 + NLGN2 ENSG00000169992.5 7308193 0.87 1.0 15364 25674
chr17 7323679 7324951 + SPEM1 ENSG00000181323.7 7323679 0.93 1.0 15365 10188
chr17 7328934 7330887 + C17orf74 ENSG00000184560.3 7328934 0.75 1.0 15366 4933
Expression level of Genes
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miRNAs possibly regulated by vista23871[chr17:7233457-7233867]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results