EnhancerDB
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  3. vista23872[chr17:7236036-7236269]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23872[chr17:7236036-7236269]
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Tissue distribution of vista23872
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Transcription factor that possibly regulate vista23872[chr17:7236036-7236269]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 7236044 7236057 SCRT2 JASPAR yes 21191619
chr17 7236057 7236069 FOXI1 JASPAR yes 21191620
chr17 7236060 7236064 YY1 TRANSFAC yes 21191621
chr17 7236060 7236070 HOXA13 JASPAR yes 21191622
chr17 7236060 7236070 HOXB13 JASPAR yes 21191623
chr17 7236060 7236070 HOXD13 JASPAR yes 21191624
chr17 7236060 7236071 HOXA10 JASPAR yes 21191625
chr17 7236061 7236070 CDX1 JASPAR yes 21191626
chr17 7236061 7236072 CDX2 JASPAR yes 21191627
chr17 7236081 7236091 SP1 JASPAR yes 21191628
chr17 7236082 7236092 SP1 JASPAR yes 21191629
chr17 7236082 7236103 ZNF263 JASPAR yes 21191630
chr17 7236083 7236087 LFA1 TRANSFAC yes 21191631
chr17 7236094 7236104 MZF1 JASPAR yes 21191632
chr17 7236131 7236145 CREB3 JASPAR yes 21191633
chr17 7236132 7236142 MAX JASPAR yes 21191634
chr17 7236132 7236143 USF1 JASPAR yes 21191635
chr17 7236132 7236143 USF2 JASPAR yes 21191636
chr17 7236133 7236143 BHLHE40 JASPAR yes 21191637
chr17 7236133 7236143 BHLHE41 JASPAR yes 21191638
chr17 7236133 7236143 MLXIPL JASPAR yes 21191639
chr17 7236133 7236143 MLX JASPAR yes 21191640
chr17 7236133 7236143 SREBF1 JASPAR yes 21191641
chr17 7236133 7236143 SREBF2 JASPAR yes 21191642
chr17 7236133 7236143 TFE3 JASPAR yes 21191643
chr17 7236133 7236143 TFEB JASPAR yes 21191644
chr17 7236133 7236143 TFEC JASPAR yes 21191645
chr17 7236133 7236144 USF1 JASPAR yes 21191646
chr17 7236133 7236144 USF2 JASPAR yes 21191647
chr17 7236134 7236144 MAX JASPAR yes 21191648
chr17 7236135 7236140 MYC TRANSFAC yes 21191649
chr17 7236135 7236140 USF1 TRANSFAC yes 21191650
chr17 7236135 7236140 USF2 TRANSFAC yes 21191651
chr17 7236144 7236162 ESR2 JASPAR yes 21191652
chr17 7236146 7236166 ESR1 JASPAR yes 21191653
chr17 7236153 7236158 SP1 TRANSFAC yes 21191654
chr17 7236195 7236205 BHLHE22 JASPAR yes 21191655
chr17 7236200 7236205 ATF1 TRANSFAC yes 21191656
chr17 7236202 7236213 NRL JASPAR yes 21191657
chr17 7236222 7236236 GATA2 JASPAR yes 21191658
chr17 7236224 7236230 GATA1 TRANSFAC yes 21191659
chr17 7236224 7236232 GATA5 JASPAR yes 21191660
chr17 7236231 7236245 TCF7L2 JASPAR yes 21191661
chr17 7236231 7236246 LEF1 JASPAR yes 21191662
chr17 7236243 7236247 YY1 TRANSFAC yes 21191663
chr17 7236245 7236263 IRF2 JASPAR yes 21191664
chr17 7236246 7236267 IRF1 JASPAR yes 21191665
chr17 7236248 7236263 PRDM1 JASPAR yes 21191666
chr17 7236250 7236262 IRF1 JASPAR yes 21191667
chr17 7236258 7236262 YY1 TRANSFAC yes 21191668
SNP sites on vista23872[chr17:7236036-7236269]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 7236056 rs2871334 G A
SCRT2
4729339
chr17 7236067 rs112954715 T C
CDX1 CDX2 FOXI1 HOXA10 HOXA13 HOXB13 HOXD13
4729340
chr17 7236124 rs11653850 G A no 4729341
chr17 7236175 rs2871333 G A no 4729342
Genes possibly regulated by vista23872[chr17:7236036-7236269]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7128660 7137864 - DVL2 ENSG00000004975.7 7137864 0.69 1.0 15343 1828
chr17 7138347 7143041 - PHF23 ENSG00000040633.8 7143041 0.61 0.99 15344 7005
chr17 7143333 7146089 - GABARAP ENSG00000170296.5 7146089 0.6 0.91 15345 10053
chr17 7143746 7147954 - CTD-2545G14.7 ENSG00000262526.2 7147954 0.96 0.95 15346 11918
chr17 7146910 7155810 - CTDNEP1 ENSG00000175826.7 7155810 0.55 0.99 15347 19774
chr17 7150148 7165408 - RP1-4G17.5 ENSG00000262302.1 7165408 1.0 1.0 15348 29372
chr17 7154735 7163259 + ELP5 ENSG00000170291.10 7154735 0.72 1.0 15349 18699
chr17 7163222 7167302 - CLDN7 ENSG00000181885.14 7167302 0.82 1.0 15350 31266
chr17 7184986 7191576 + SLC2A4 ENSG00000181856.10 7184986 0.94 1.0 15351 48950
chr17 7191571 7197934 - YBX2 ENSG00000006047.8 7197934 0.88 1.0 15352 61898
chr17 7210318 7215774 + EIF5A ENSG00000132507.13 7210318 0.84 0.99 15353 74282
chr17 7214643 7218883 - GPS2 ENSG00000132522.11 7218883 0.57 1.0 15354 82847
chr17 7215980 7222493 - RP11-542C16.2 ENSG00000261915.2 7222493 0.89 0.94 15355 86457
chr17 7218947 7232712 - NEURL4 ENSG00000215041.5 7232712 0.63 1.0 15356 96676
chr17 7239848 7254797 + ACAP1 ENSG00000072818.7 7239848 0.89 1.0 15357 96421
chr17 7255208 7258258 + KCTD11 ENSG00000213859.3 7255208 0.72 1.0 15358 81061
chr17 7258442 7260538 + TMEM95 ENSG00000182896.8 7258442 0.86 0.0 15359 77827
chr17 7283853 7293093 + TNK1 ENSG00000174292.8 7283853 0.64 1.0 15360 52416
chr17 7293046 7307416 - TMEM256-PLSCR3 ENSG00000187838.12 7307416 0.61 0.73 15361 28853
chr17 7293053 7307416 - C17orf61-PLSCR3 ENSG00000262481.1 7307416 0.91 0.92 15362 28853
chr17 7306294 7307456 - TMEM256 ENSG00000205544.3 7307456 0.61 0.95 15363 28813
chr17 7308193 7323179 + NLGN2 ENSG00000169992.5 7308193 0.87 1.0 15364 28076
chr17 7323679 7324951 + SPEM1 ENSG00000181323.7 7323679 0.93 1.0 15365 12590
chr17 7328934 7330887 + C17orf74 ENSG00000184560.3 7328934 0.75 1.0 15366 7335
Expression level of Genes
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miRNAs possibly regulated by vista23872[chr17:7236036-7236269]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results