EnhancerDB
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  3. vista23874[chr17:7379219-7379555]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23874[chr17:7379219-7379555]
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Tissue distribution of vista23874
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Transcription factor that possibly regulate vista23874[chr17:7379219-7379555]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 7379119 7379415 BHLHE40 UCSC Txn Factor no Conserved 108234375
chr17 7379442 7380190 GATA1 UCSC Txn Factor no Conserved 108234381
chr17 7379231 7379243 TAL1 JASPAR yes 21191681
chr17 7379233 7379243 MSC JASPAR yes 21191682
chr17 7379233 7379243 TFAP4 JASPAR yes 21191683
chr17 7379233 7379245 TAL1 JASPAR yes 21191684
chr17 7379239 7379250 NFIL3 JASPAR yes 21191685
chr17 7379240 7379252 DBP JASPAR yes 21191686
chr17 7379240 7379252 HLF JASPAR yes 21191687
chr17 7379265 7379275 BHLHE40 JASPAR yes 21191688
chr17 7379265 7379275 BHLHE41 JASPAR yes 21191689
chr17 7379265 7379275 MLXIPL JASPAR yes 21191690
chr17 7379265 7379275 MLX JASPAR yes 21191691
chr17 7379265 7379275 TFE3 JASPAR yes 21191692
chr17 7379265 7379275 TFEB JASPAR yes 21191693
chr17 7379265 7379275 TFEC JASPAR yes 21191694
chr17 7379266 7379276 MAX JASPAR yes 21191695
chr17 7379267 7379272 MYC TRANSFAC yes 21191696
chr17 7379267 7379272 USF1 TRANSFAC yes 21191697
chr17 7379267 7379272 USF2 TRANSFAC yes 21191698
chr17 7379273 7379281 ISL2 JASPAR yes 21191699
chr17 7379273 7379282 NKX3-2 JASPAR yes 21191700
chr17 7379284 7379293 JDP2 JASPAR yes 21191701
chr17 7379291 7379304 SMAD2 JASPAR yes 21191702
chr17 7379300 7379321 ZNF263 JASPAR yes 21191703
chr17 7379303 7379318 PRDM1 JASPAR yes 21191704
chr17 7379306 7379327 ZNF263 JASPAR yes 21191705
chr17 7379401 7379405 H4TF2 TRANSFAC yes 21191706
chr17 7379410 7379413 MYB TRANSFAC yes 21191707
chr17 7379414 7379425 USF2 JASPAR yes 21191708
chr17 7379415 7379425 MAX JASPAR yes 21191709
chr17 7379415 7379425 MLX JASPAR yes 21191710
chr17 7379415 7379425 TFE3 JASPAR yes 21191711
chr17 7379415 7379425 TFEB JASPAR yes 21191712
chr17 7379415 7379425 TFEC JASPAR yes 21191713
chr17 7379415 7379426 USF1 JASPAR yes 21191714
chr17 7379415 7379426 USF2 JASPAR yes 21191715
chr17 7379416 7379426 MAX JASPAR yes 21191716
chr17 7379417 7379422 MYC TRANSFAC yes 21191717
chr17 7379417 7379422 USF1 TRANSFAC yes 21191718
chr17 7379417 7379422 USF2 TRANSFAC yes 21191719
chr17 7379417 7379424 USF1 JASPAR yes 21191720
chr17 7379422 7379426 H4TF2 TRANSFAC yes 21191721
chr17 7379425 7379436 ESRRB JASPAR yes 21191722
chr17 7379445 7379449 NFE TRANSFAC yes 21191723
chr17 7379446 7379451 GATA2 JASPAR yes 21191724
chr17 7379456 7379477 ZNF263 JASPAR yes 21191725
chr17 7379468 7379476 EHF JASPAR yes 21191726
chr17 7379471 7379492 ZNF263 JASPAR yes 21191727
chr17 7379474 7379495 ZNF263 JASPAR yes 21191728
chr17 7379485 7379495 SP1 JASPAR yes 21191729
chr17 7379489 7379500 EBF1 JASPAR yes 21191730
chr17 7379489 7379502 TFAP2B JASPAR yes 21191731
chr17 7379499 7379503 ESR1 TRANSFAC yes 21191732
chr17 7379510 7379525 RUNX2 JASPAR yes 21191733
chr17 7379511 7379514 MYB TRANSFAC yes 21191734
chr17 7379511 7379520 RUNX2 JASPAR yes 21191735
chr17 7379511 7379521 RUNX3 JASPAR yes 21191736
chr17 7379511 7379522 RUNX1 JASPAR yes 21191737
chr17 7379527 7379531 NFE TRANSFAC yes 21191738
SNP sites on vista23874[chr17:7379219-7379555]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 7379316 rs373243396 AC A
BHLHE40 PRDM1 ZNF263
4730010
chr17 7379347 rs149612380 T C
BHLHE40
4730011
chr17 7379357 rs538604322 G A
BHLHE40
4730012
chr17 7379457 rs542874711 C T
GATA1 ZNF263
4730013
Genes possibly regulated by vista23874[chr17:7379219-7379555]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7283853 7293093 + TNK1 ENSG00000174292.8 7283853 0.64 1.0 15360 4634
chr17 7293046 7307416 - TMEM256-PLSCR3 ENSG00000187838.12 7307416 0.61 0.73 15361 28197
chr17 7293053 7307416 - C17orf61-PLSCR3 ENSG00000262481.1 7307416 0.91 0.92 15362 28197
chr17 7306294 7307456 - TMEM256 ENSG00000205544.3 7307456 0.61 0.95 15363 28237
chr17 7308193 7323179 + NLGN2 ENSG00000169992.5 7308193 0.87 1.0 15364 28974
chr17 7323679 7324951 + SPEM1 ENSG00000181323.7 7323679 0.93 1.0 15365 44460
chr17 7328934 7330887 + C17orf74 ENSG00000184560.3 7328934 0.75 1.0 15366 49715
chr17 7338762 7340998 + TMEM102 ENSG00000181284.2 7338762 0.67 1.0 15367 59543
chr17 7341592 7348256 + FGF11 ENSG00000161958.6 7341592 0.88 0.99 15368 62373
chr17 7348380 7361026 + CHRNB1 ENSG00000170175.6 7348380 0.84 1.0 15369 69161
chr17 7362685 7387582 - ZBTB4 ENSG00000174282.7 7387582 0.69 1.0 15370 91973
chr17 7384721 7386383 + SLC35G6 ENSG00000259224.1 7384721 0.79 1.0 15371 94834
chr17 7387685 7417933 + POLR2A ENSG00000181222.10 7387685 0.62 1.0 15372 91870
chr17 7452208 7464925 + TNFSF12 ENSG00000239697.6 7452208 0.71 1.0 15373 27347
chr17 7452416 7464918 + TNFSF12-TNFSF13 ENSG00000248871.1 7452416 0.95 0.98 15374 27139
chr17 7461609 7464925 + TNFSF13 ENSG00000161955.12 7461609 0.83 0.95 15375 17946
chr17 7465192 7475287 + SENP3 ENSG00000161956.8 7465192 0.6 0.96 15376 14363
chr17 7476024 7482323 + EIF4A1 ENSG00000161960.10 7476024 0.86 0.69 15377 3531
Expression level of Genes
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miRNAs possibly regulated by vista23874[chr17:7379219-7379555]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results