EnhancerDB
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  3. vista2388[chr1:90153439-90153806]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2388[chr1:90153439-90153806]
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Tissue distribution of vista2388
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Transcription factor that possibly regulate vista2388[chr1:90153439-90153806]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90153472 90153484 MEF2A JASPAR yes 118325424
chr1 90153472 90153484 MEF2B JASPAR yes 118325425
chr1 90153472 90153484 MEF2D JASPAR yes 118325426
chr1 90153473 90153483 MEF2A JASPAR yes 118325427
chr1 90153518 90153532 MTF1 JASPAR yes 118325428
chr1 90153535 90153539 YY1 TRANSFAC yes 118325429
chr1 90153540 90153543 MYB TRANSFAC yes 118325430
chr1 90153540 90153552 TGIF1 JASPAR yes 118325431
chr1 90153540 90153552 TGIF2 JASPAR yes 118325432
chr1 90153541 90153551 MYF6 JASPAR yes 118325433
chr1 90153541 90153551 NEUROG2 JASPAR yes 118325434
chr1 90153550 90153566 RFX2 JASPAR yes 118325435
chr1 90153567 90153577 MEF2A JASPAR yes 118325436
chr1 90153568 90153576 FOXL1 JASPAR yes 118325437
chr1 90153577 90153592 MEF2A JASPAR yes 118325438
chr1 90153579 90153591 MEF2A JASPAR yes 118325439
chr1 90153579 90153591 MEF2D JASPAR yes 118325440
chr1 90153608 90153613 USF2 TRANSFAC yes 118325441
chr1 90153623 90153635 MYBL1 JASPAR yes 118325442
chr1 90153625 90153636 HOXC11 JASPAR yes 118325443
chr1 90153625 90153636 HOXC12 JASPAR yes 118325444
chr1 90153625 90153636 HOXD12 JASPAR yes 118325445
chr1 90153628 90153631 MYB TRANSFAC yes 118325446
chr1 90153639 90153650 ESRRA JASPAR yes 118325447
chr1 90153643 90153651 FOXC1 JASPAR yes 118325448
chr1 90153650 90153655 MYB TRANSFAC yes 118325449
chr1 90153668 90153678 FIGLA JASPAR yes 118325450
chr1 90153679 90153694 HNF4G JASPAR yes 118325451
chr1 90153680 90153694 NR2F1 JASPAR yes 118325452
chr1 90153680 90153695 HNF4A JASPAR yes 118325453
chr1 90153705 90153716 TBX20 JASPAR yes 118325454
chr1 90153706 90153716 SREBF1 JASPAR yes 118325455
chr1 90153706 90153716 SREBF2 JASPAR yes 118325456
chr1 90153707 90153715 MGA JASPAR yes 118325457
chr1 90153717 90153721 NFE TRANSFAC yes 118325458
chr1 90153725 90153729 YY1 TRANSFAC yes 118325459
chr1 90153730 90153734 ESR1 TRANSFAC yes 118325460
chr1 90153734 90153752 NR3C1 JASPAR yes 118325461
chr1 90153747 90153757 MZF1 JASPAR yes 118325462
chr1 90153749 90153759 SP1 JASPAR yes 118325463
chr1 90153750 90153756 SP1 TRANSFAC yes 118325464
chr1 90153750 90153760 SP1 JASPAR yes 118325465
chr1 90153750 90153760 SP1 TRANSFAC yes 118325466
chr1 90153755 90153761 SP1 TRANSFAC yes 118325467
chr1 90153763 90153769 SOX10 JASPAR yes 118325468
chr1 90153792 90153798 TBP TRANSFAC yes 118325469
chr1 90153801 90153805 LFA1 TRANSFAC yes 118325470
SNP sites on vista2388[chr1:90153439-90153806]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90153722 rs56677437 C G no 470565
chr1 90153749 rs72961887 T G
MZF1 NR3C1 SP1
470566
chr1 90153793 rs150991306 T TA
TBP
470567
Genes possibly regulated by vista2388[chr1:90153439-90153806]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90098631 90235462 + LRRC8C ENSG00000171488.10 90098631 0.84 0.99 882 45192
chr1 90098699 90398809 + RP11-302M6.4 ENSG00000271949.1 90098699 1.0 1.0 883 45260
Expression level of Genes
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miRNAs possibly regulated by vista2388[chr1:90153439-90153806]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results