EnhancerDB
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  3. vista23889[chr17:7781804-7782205]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23889[chr17:7781804-7782205]
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Tissue distribution of vista23889
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Transcription factor that possibly regulate vista23889[chr17:7781804-7782205]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 7781790 7781805 ZIC3 JASPAR yes 21193162
chr17 7781790 7781805 ZIC4 JASPAR yes 21193163
chr17 7781790 7781805 ZIC3 JASPAR yes 52957432
chr17 7781790 7781805 ZIC4 JASPAR yes 52957433
chr17 7781791 7781805 GLIS2 JASPAR yes 21193164
chr17 7781791 7781805 GLIS3 JASPAR yes 21193165
chr17 7781791 7781805 ZIC1 JASPAR yes 21193166
chr17 7781791 7781805 GLIS2 JASPAR yes 52957434
chr17 7781791 7781805 GLIS3 JASPAR yes 52957435
chr17 7781791 7781805 ZIC1 JASPAR yes 52957436
chr17 7781807 7781816 SNAI2 JASPAR yes 21193167
chr17 7781807 7781816 SNAI2 JASPAR yes 52957437
chr17 7781807 7781817 ID4 JASPAR yes 21193168
chr17 7781807 7781817 ID4 JASPAR yes 52957438
chr17 7781810 7781823 NFKB1 JASPAR yes 21193169
chr17 7781810 7781823 NFKB1 JASPAR yes 52957439
chr17 7781812 7781818 ZNF354C JASPAR yes 21193170
chr17 7781812 7781818 ZNF354C JASPAR yes 52957440
chr17 7781815 7781826 USF1 JASPAR yes 21193171
chr17 7781815 7781826 USF2 JASPAR yes 21193172
chr17 7781815 7781826 USF1 JASPAR yes 52957441
chr17 7781815 7781826 USF2 JASPAR yes 52957442
chr17 7781816 7781826 SREBF2 JASPAR yes 21193173
chr17 7781816 7781826 SREBF2 JASPAR yes 52957443
chr17 7781818 7781823 USF2 TRANSFAC yes 21193174
chr17 7781818 7781823 USF2 TRANSFAC yes 52957444
chr17 7781821 7781834 NR2F1 JASPAR yes 21193175
chr17 7781821 7781834 NR2F1 JASPAR yes 52957445
chr17 7781822 7781830 CREB1 JASPAR yes 21193176
chr17 7781822 7781830 CREB1 JASPAR yes 52957446
chr17 7781825 7781829 ESR1 TRANSFAC yes 21193177
chr17 7781825 7781829 ESR1 TRANSFAC yes 52957447
chr17 7781856 7781869 NFKB2 JASPAR yes 21193178
chr17 7781856 7781869 NFKB2 JASPAR yes 52957448
chr17 7781863 7781873 SP1 JASPAR yes 21193179
chr17 7781863 7781873 SP1 JASPAR yes 52957449
chr17 7781864 7781870 SP1 TRANSFAC yes 21193180
chr17 7781864 7781870 SP1 TRANSFAC yes 52957450
chr17 7781864 7781874 SP1 JASPAR yes 21193181
chr17 7781864 7781874 SP1 JASPAR yes 52957451
chr17 7781890 7781910 RREB1 JASPAR yes 21193182
chr17 7781890 7781910 RREB1 JASPAR yes 52957452
chr17 7781900 7781912 ZBTB7C JASPAR yes 21193183
chr17 7781900 7781912 ZBTB7C JASPAR yes 52957453
chr17 7781908 7781920 HES5 JASPAR yes 21193184
chr17 7781908 7781920 HES7 JASPAR yes 21193185
chr17 7781908 7781920 HES5 JASPAR yes 52957454
chr17 7781908 7781920 HES7 JASPAR yes 52957455
chr17 7781909 7781919 HEY1 JASPAR yes 21193186
chr17 7781909 7781919 HEY2 JASPAR yes 21193187
chr17 7781909 7781919 HEY1 JASPAR yes 52957456
chr17 7781909 7781919 HEY2 JASPAR yes 52957457
chr17 7781937 7781958 ZNF263 JASPAR yes 21193188
chr17 7781937 7781958 ZNF263 JASPAR yes 52957458
chr17 7781976 7781993 ESR1 JASPAR yes 21193189
chr17 7781976 7781993 ESR1 JASPAR yes 52957459
chr17 7781985 7781995 SREBF1 JASPAR yes 21193190
chr17 7781985 7781995 SREBF1 JASPAR yes 52957460
chr17 7782018 7782022 LFA1 TRANSFAC yes 21193191
chr17 7782018 7782022 LFA1 TRANSFAC yes 52957461
chr17 7782039 7782050 CDX2 JASPAR yes 21193192
chr17 7782039 7782050 CDX2 JASPAR yes 52957462
chr17 7782040 7782051 HOXA10 JASPAR yes 21193193
chr17 7782040 7782051 HOXC11 JASPAR yes 21193194
chr17 7782040 7782051 HOXC13 JASPAR yes 21193195
chr17 7782040 7782051 HOXA10 JASPAR yes 52957463
chr17 7782040 7782051 HOXC11 JASPAR yes 52957464
chr17 7782040 7782051 HOXC13 JASPAR yes 52957465
chr17 7782041 7782050 CDX1 JASPAR yes 21193196
chr17 7782041 7782050 CDX1 JASPAR yes 52957466
chr17 7782041 7782051 HOXA13 JASPAR yes 21193197
chr17 7782041 7782051 HOXB13 JASPAR yes 21193198
chr17 7782041 7782051 HOXC10 JASPAR yes 21193199
chr17 7782041 7782051 HOXD11 JASPAR yes 21193200
chr17 7782041 7782051 HOXD13 JASPAR yes 21193201
chr17 7782041 7782051 HOXA13 JASPAR yes 52957467
chr17 7782041 7782051 HOXB13 JASPAR yes 52957468
chr17 7782041 7782051 HOXC10 JASPAR yes 52957469
chr17 7782041 7782051 HOXD11 JASPAR yes 52957470
chr17 7782041 7782051 HOXD13 JASPAR yes 52957471
chr17 7782053 7782057 YY1 TRANSFAC yes 21193202
chr17 7782053 7782057 YY1 TRANSFAC yes 52957472
chr17 7782063 7782067 YY1 TRANSFAC yes 21193203
chr17 7782063 7782067 YY1 TRANSFAC yes 52957473
chr17 7782072 7782084 DBP JASPAR yes 21193204
chr17 7782072 7782084 HLF JASPAR yes 21193205
chr17 7782072 7782084 DBP JASPAR yes 52957474
chr17 7782072 7782084 HLF JASPAR yes 52957475
chr17 7782077 7782081 TEAD2 TRANSFAC yes 21193206
chr17 7782077 7782081 TEAD2 TRANSFAC yes 52957476
chr17 7782077 7782087 MNX1 JASPAR yes 21193207
chr17 7782077 7782087 MNX1 JASPAR yes 52957477
chr17 7782083 7782087 TEAD2 TRANSFAC yes 21193208
chr17 7782083 7782087 TEAD2 TRANSFAC yes 52957478
chr17 7782083 7782088 TBP TRANSFAC yes 21193209
chr17 7782083 7782088 TBP TRANSFAC yes 52957479
chr17 7782083 7782089 TFIID TRANSFAC yes 21193210
chr17 7782083 7782089 TFIID TRANSFAC yes 52957480
chr17 7782091 7782106 AR JASPAR yes 21193211
chr17 7782091 7782106 AR JASPAR yes 52957481
chr17 7782123 7782130 NKX3-1 JASPAR yes 21193212
chr17 7782123 7782130 NKX3-1 JASPAR yes 52957482
chr17 7782127 7782131 TEAD2 TRANSFAC yes 21193213
chr17 7782127 7782131 TEAD2 TRANSFAC yes 52957483
chr17 7782127 7782132 TBP TRANSFAC yes 21193214
chr17 7782127 7782132 TBP TRANSFAC yes 52957484
chr17 7782127 7782133 TFIID TRANSFAC yes 21193215
chr17 7782127 7782133 TFIID TRANSFAC yes 52957485
chr17 7782134 7782155 IRF1 JASPAR yes 21193216
chr17 7782134 7782155 IRF1 JASPAR yes 52957486
chr17 7782137 7782141 YY1 TRANSFAC yes 21193217
chr17 7782137 7782141 YY1 TRANSFAC yes 52957487
chr17 7782138 7782159 ZNF263 JASPAR yes 21193218
chr17 7782138 7782159 ZNF263 JASPAR yes 52957488
chr17 7782141 7782162 ZNF263 JASPAR yes 21193219
chr17 7782141 7782162 ZNF263 JASPAR yes 52957489
chr17 7782144 7782165 ZNF263 JASPAR yes 21193220
chr17 7782144 7782165 ZNF263 JASPAR yes 52957490
chr17 7782147 7782168 ZNF263 JASPAR yes 21193221
chr17 7782147 7782168 ZNF263 JASPAR yes 52957491
chr17 7782148 7782169 ZNF263 JASPAR yes 21193222
chr17 7782148 7782169 ZNF263 JASPAR yes 52957492
chr17 7782150 7782171 ZNF263 JASPAR yes 21193223
chr17 7782150 7782171 ZNF263 JASPAR yes 52957493
chr17 7782155 7782165 MZF1 JASPAR yes 21193224
chr17 7782155 7782165 MZF1 JASPAR yes 52957494
chr17 7782155 7782167 INSM1 JASPAR yes 21193225
chr17 7782155 7782167 INSM1 JASPAR yes 52957495
chr17 7782156 7782170 PLAG1 JASPAR yes 21193226
chr17 7782156 7782170 PLAG1 JASPAR yes 52957496
chr17 7782158 7782168 SP1 JASPAR yes 21193227
chr17 7782158 7782168 SP1 JASPAR yes 52957497
chr17 7782161 7782175 E2F7 JASPAR yes 21193228
chr17 7782161 7782175 E2F7 JASPAR yes 52957498
chr17 7782163 7782169 MZF1 JASPAR yes 21193229
chr17 7782163 7782169 MZF1 JASPAR yes 52957499
chr17 7782200 7782204 NFE TRANSFAC yes 21193230
chr17 7782200 7782204 NFE TRANSFAC yes 52957500
chr17 7782200 7782205 GATA1 TRANSFAC yes 21193231
chr17 7782200 7782205 GATA1 TRANSFAC yes 52957501
chr17 7782200 7782206 GATA3 JASPAR yes 21193232
chr17 7782200 7782206 GATA3 JASPAR yes 52957502
SNP sites on vista23889[chr17:7781804-7782205]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 7781837 rs60712401 C T no 4731533
chr17 7781873 rs372381625 C T
SP1
4731534
chr17 7781998 rs139795179 C T no 4731535
chr17 7782040 rs59328845 G A
CDX2 HOXA10 HOXC11 HOXC13
4731536
chr17 7782130 rs74252294 T C
NKX3-1 TBP TEAD2 TFIID
4731537
Genes possibly regulated by vista23889[chr17:7781804-7782205]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7743222 7758114 + KDM6B ENSG00000132510.6 7743222 0.73 1.0 15390 61418
chr17 7758383 7759417 + TMEM88 ENSG00000167874.6 7758383 0.78 1.0 15391 76579
chr17 7760003 7788556 - LSMD1 ENSG00000183011.9 7788556 0.86 1.0 15392 93649
chr17 7761064 7765600 + CYB5D1 ENSG00000182224.7 7761064 0.74 0.99 15393 79260
chr17 7788124 7816078 + CHD3 ENSG00000170004.12 7788124 0.71 1.0 15394 94081
chr17 7825177 7833121 - KCNAB3 ENSG00000170049.5 7833121 0.93 1.0 15395 49084
chr17 7829249 7833940 - RP11-1099M24.7 ENSG00000262730.1 7833940 1.0 1.0 15396 48265
chr17 7833663 7835441 - TRAPPC1 ENSG00000170043.7 7835441 0.73 0.99 15397 46764
chr17 7835419 7853236 + CNTROB ENSG00000170037.9 7835419 0.74 1.0 15398 46786
Expression level of Genes
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miRNAs possibly regulated by vista23889[chr17:7781804-7782205]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results