EnhancerDB
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  3. vista23890[chr17:7784207-7784538]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23890[chr17:7784207-7784538]
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Tissue distribution of vista23890
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Transcription factor that possibly regulate vista23890[chr17:7784207-7784538]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 7784213 7784223 HMBOX1 JASPAR yes 21193233
chr17 7784213 7784223 HMBOX1 JASPAR yes 52957815
chr17 7784215 7784218 MYB TRANSFAC yes 21193234
chr17 7784215 7784218 MYB TRANSFAC yes 52957816
chr17 7784232 7784242 MAX JASPAR yes 21193235
chr17 7784232 7784242 MAX JASPAR yes 52957817
chr17 7784232 7784244 HES5 JASPAR yes 21193236
chr17 7784232 7784244 HES7 JASPAR yes 21193237
chr17 7784232 7784244 HES5 JASPAR yes 52957818
chr17 7784232 7784244 HES7 JASPAR yes 52957819
chr17 7784233 7784243 BHLHE40 JASPAR yes 21193238
chr17 7784233 7784243 BHLHE41 JASPAR yes 21193239
chr17 7784233 7784243 CLOCK JASPAR yes 21193240
chr17 7784233 7784243 HEY1 JASPAR yes 21193241
chr17 7784233 7784243 HEY2 JASPAR yes 21193242
chr17 7784233 7784243 MAX JASPAR yes 21193243
chr17 7784233 7784243 MLXIPL JASPAR yes 21193244
chr17 7784233 7784243 MLX JASPAR yes 21193245
chr17 7784233 7784243 MNT JASPAR yes 21193246
chr17 7784233 7784243 BHLHE40 JASPAR yes 52957820
chr17 7784233 7784243 BHLHE41 JASPAR yes 52957821
chr17 7784233 7784243 CLOCK JASPAR yes 52957822
chr17 7784233 7784243 HEY1 JASPAR yes 52957823
chr17 7784233 7784243 HEY2 JASPAR yes 52957824
chr17 7784233 7784243 MAX JASPAR yes 52957825
chr17 7784233 7784243 MLXIPL JASPAR yes 52957826
chr17 7784233 7784243 MLX JASPAR yes 52957827
chr17 7784233 7784243 MNT JASPAR yes 52957828
chr17 7784234 7784244 MAX JASPAR yes 21193247
chr17 7784234 7784244 MAX JASPAR yes 52957829
chr17 7784235 7784240 MYC TRANSFAC yes 21193248
chr17 7784235 7784240 USF1 TRANSFAC yes 21193249
chr17 7784235 7784240 USF2 TRANSFAC yes 21193250
chr17 7784235 7784240 MYC TRANSFAC yes 52957830
chr17 7784235 7784240 USF1 TRANSFAC yes 52957831
chr17 7784235 7784240 USF2 TRANSFAC yes 52957832
chr17 7784248 7784251 MYB TRANSFAC yes 21193251
chr17 7784248 7784251 MYB TRANSFAC yes 52957833
chr17 7784267 7784285 SRF JASPAR yes 21193252
chr17 7784267 7784285 SRF JASPAR yes 52957834
chr17 7784269 7784285 SRF JASPAR yes 21193253
chr17 7784269 7784285 SRF JASPAR yes 52957835
chr17 7784277 7784283 YY1 JASPAR yes 21193254
chr17 7784277 7784283 YY1 JASPAR yes 52957836
chr17 7784279 7784299 TP63 JASPAR yes 21193255
chr17 7784279 7784299 TP63 JASPAR yes 52957837
chr17 7784280 7784298 TP53 JASPAR yes 21193256
chr17 7784280 7784298 TP53 JASPAR yes 52957838
chr17 7784307 7784320 SMAD2 JASPAR yes 21193257
chr17 7784307 7784320 SMAD2 JASPAR yes 52957839
chr17 7784318 7784332 SPIC JASPAR yes 21193258
chr17 7784318 7784332 SPIC JASPAR yes 52957840
chr17 7784322 7784329 SPIB JASPAR yes 21193259
chr17 7784322 7784329 SPIB JASPAR yes 52957841
chr17 7784322 7784333 FLI1 JASPAR yes 21193260
chr17 7784322 7784333 FLI1 JASPAR yes 52957842
chr17 7784323 7784331 EHF JASPAR yes 21193261
chr17 7784323 7784331 EHF JASPAR yes 52957843
chr17 7784328 7784343 HSF1 JASPAR yes 21193262
chr17 7784328 7784343 HSF1 JASPAR yes 52957844
chr17 7784336 7784357 IRF1 JASPAR yes 21193263
chr17 7784336 7784357 IRF1 JASPAR yes 52957845
chr17 7784340 7784354 SPI1 JASPAR yes 21193264
chr17 7784340 7784354 SPI1 JASPAR yes 52957846
chr17 7784348 7784369 ZNF263 JASPAR yes 21193265
chr17 7784348 7784369 ZNF263 JASPAR yes 52957847
chr17 7784369 7784389 RREB1 JASPAR yes 21193266
chr17 7784369 7784389 RREB1 JASPAR yes 52957848
chr17 7784374 7784380 HiNF-A TRANSFAC yes 21193267
chr17 7784374 7784380 HiNF-A TRANSFAC yes 52957849
chr17 7784376 7784396 TP63 JASPAR yes 21193268
chr17 7784376 7784396 TP63 JASPAR yes 52957850
chr17 7784378 7784393 TP53 JASPAR yes 21193269
chr17 7784378 7784393 TP53 JASPAR yes 52957851
chr17 7784384 7784403 PAX5 JASPAR yes 21193270
chr17 7784384 7784403 PAX5 JASPAR yes 52957852
chr17 7784425 7784436 EBF1 JASPAR yes 21193271
chr17 7784425 7784436 EBF1 JASPAR yes 52957853
chr17 7784435 7784450 STAT1 JASPAR yes 21193272
chr17 7784435 7784450 STAT1 JASPAR yes 52957854
chr17 7784437 7784442 GATA2 JASPAR yes 21193273
chr17 7784437 7784442 GATA2 JASPAR yes 52957855
chr17 7784437 7784450 ELF1 JASPAR yes 21193274
chr17 7784437 7784450 ELF1 JASPAR yes 52957856
chr17 7784438 7784450 EHF JASPAR yes 21193275
chr17 7784438 7784450 ELF1 JASPAR yes 21193276
chr17 7784438 7784450 ELF4 JASPAR yes 21193277
chr17 7784438 7784450 EHF JASPAR yes 52957857
chr17 7784438 7784450 ELF1 JASPAR yes 52957858
chr17 7784438 7784450 ELF4 JASPAR yes 52957859
chr17 7784438 7784451 ELF3 JASPAR yes 21193278
chr17 7784438 7784451 ELF3 JASPAR yes 52957860
chr17 7784439 7784450 ELF5 JASPAR yes 21193279
chr17 7784439 7784450 ELF5 JASPAR yes 52957861
chr17 7784441 7784449 FEV JASPAR yes 21193280
chr17 7784441 7784449 FEV JASPAR yes 52957862
chr17 7784473 7784480 SPIB JASPAR yes 21193281
chr17 7784473 7784480 SPIB JASPAR yes 52957863
chr17 7784490 7784511 ZNF263 JASPAR yes 21193282
chr17 7784490 7784511 ZNF263 JASPAR yes 52957864
chr17 7784528 7784543 AR JASPAR yes 21193283
chr17 7784528 7784543 AR JASPAR yes 52957865
SNP sites on vista23890[chr17:7784207-7784538]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 7784293 rs142402377 C G
TP53 TP63
4731560
chr17 7784295 rs17807204 A G
TP53 TP63
4731561
chr17 7784458 rs117505892 G A no 4731562
Genes possibly regulated by vista23890[chr17:7784207-7784538]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7743222 7758114 + KDM6B ENSG00000132510.6 7743222 0.73 1.0 15390 59015
chr17 7758383 7759417 + TMEM88 ENSG00000167874.6 7758383 0.78 1.0 15391 74176
chr17 7760003 7788556 - LSMD1 ENSG00000183011.9 7788556 0.86 1.0 15392 95982
chr17 7761064 7765600 + CYB5D1 ENSG00000182224.7 7761064 0.74 0.99 15393 76857
chr17 7788124 7816078 + CHD3 ENSG00000170004.12 7788124 0.71 1.0 15394 96414
chr17 7825177 7833121 - KCNAB3 ENSG00000170049.5 7833121 0.93 1.0 15395 51417
chr17 7829249 7833940 - RP11-1099M24.7 ENSG00000262730.1 7833940 1.0 1.0 15396 50598
chr17 7833663 7835441 - TRAPPC1 ENSG00000170043.7 7835441 0.73 0.99 15397 49097
chr17 7835419 7853236 + CNTROB ENSG00000170037.9 7835419 0.74 1.0 15398 49119
Expression level of Genes
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miRNAs possibly regulated by vista23890[chr17:7784207-7784538]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results