EnhancerDB
  1. Home
  2. Enhancers
  3. vista23892[chr17:7854986-7855236]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23892[chr17:7854986-7855236]
Back to top
Tissue distribution of vista23892
Back to top
Transcription factor that possibly regulate vista23892[chr17:7854986-7855236]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 7854799 7855002 BATF UCSC Txn Factor no Conserved 108235920
chr17 7854821 7855137 EBF1 UCSC Txn Factor no Conserved 108235922
chr17 7854998 7855004 NFIC JASPAR yes 21193309
chr17 7854998 7855004 NFIC JASPAR yes 52958346
chr17 7855001 7855016 NR2C2 JASPAR yes 21193310
chr17 7855001 7855016 NR2C2 JASPAR yes 52958347
chr17 7855007 7855027 RREB1 JASPAR yes 21193311
chr17 7855007 7855027 RREB1 JASPAR yes 52958348
chr17 7855011 7855016 SP1 TRANSFAC yes 21193312
chr17 7855011 7855016 SP1 TRANSFAC yes 52958349
chr17 7855014 7855028 PLAG1 JASPAR yes 21193313
chr17 7855014 7855028 PLAG1 JASPAR yes 52958350
chr17 7855022 7855037 HNF4G JASPAR yes 21193314
chr17 7855022 7855037 HNF4G JASPAR yes 52958351
chr17 7855023 7855038 HNF4A JASPAR yes 21193315
chr17 7855023 7855038 HNF4A JASPAR yes 52958352
chr17 7855023 7855040 NR3C1 JASPAR yes 21193316
chr17 7855023 7855040 NR3C1 JASPAR yes 52958353
chr17 7855041 7855052 STAT3 JASPAR yes 21193317
chr17 7855041 7855052 STAT3 JASPAR yes 52958354
chr17 7855066 7855070 NFE TRANSFAC yes 21193318
chr17 7855066 7855070 NFE TRANSFAC yes 52958355
chr17 7855066 7855071 GATA1 TRANSFAC yes 21193319
chr17 7855066 7855071 GATA1 TRANSFAC yes 52958356
chr17 7855066 7855072 GATA3 JASPAR yes 21193320
chr17 7855066 7855072 GATA3 JASPAR yes 52958357
chr17 7855069 7855080 ESRRA JASPAR yes 21193321
chr17 7855069 7855080 ESRRA JASPAR yes 52958358
chr17 7855098 7855109 FOXH1 JASPAR yes 21193322
chr17 7855098 7855109 FOXH1 JASPAR yes 52958359
chr17 7855099 7855105 ZNF354C JASPAR yes 21193323
chr17 7855099 7855105 ZNF354C JASPAR yes 52958360
chr17 7855122 7855137 FOXA1 JASPAR yes 21193324
chr17 7855122 7855137 FOXA1 JASPAR yes 52958361
chr17 7855124 7855136 FOXC2 JASPAR yes 21193325
chr17 7855124 7855136 FOXC2 JASPAR yes 52958362
chr17 7855125 7855136 FOXB1 JASPAR yes 21193326
chr17 7855125 7855136 FOXC1 JASPAR yes 21193327
chr17 7855125 7855136 FOXB1 JASPAR yes 52958363
chr17 7855125 7855136 FOXC1 JASPAR yes 52958364
chr17 7855126 7855137 FOXA1 JASPAR yes 21193328
chr17 7855126 7855137 FOXA1 JASPAR yes 52958365
chr17 7855132 7855136 YY1 TRANSFAC yes 21193329
chr17 7855132 7855136 YY1 TRANSFAC yes 52958366
chr17 7855147 7855154 NKX3-1 JASPAR yes 21193330
chr17 7855147 7855154 NKX3-1 JASPAR yes 52958367
chr17 7855151 7855154 MYB TRANSFAC yes 21193331
chr17 7855151 7855154 MYB TRANSFAC yes 52958368
chr17 7855158 7855173 TFAP2A JASPAR yes 21193332
chr17 7855158 7855173 TFAP2C JASPAR yes 21193333
chr17 7855158 7855173 TFAP2A JASPAR yes 52958369
chr17 7855158 7855173 TFAP2C JASPAR yes 52958370
chr17 7855159 7855178 CTCF JASPAR yes 21193334
chr17 7855159 7855178 CTCF JASPAR yes 52958371
chr17 7855160 7855173 TFAP2A JASPAR yes 21193335
chr17 7855160 7855173 TFAP2B JASPAR yes 21193336
chr17 7855160 7855173 TFAP2C JASPAR yes 21193337
chr17 7855160 7855173 TFAP2A JASPAR yes 52958372
chr17 7855160 7855173 TFAP2B JASPAR yes 52958373
chr17 7855160 7855173 TFAP2C JASPAR yes 52958374
chr17 7855160 7855174 EBF1 JASPAR yes 21193338
chr17 7855160 7855174 EBF1 JASPAR yes 52958375
chr17 7855160 7855175 TFAP2A JASPAR yes 21193339
chr17 7855160 7855175 TFAP2A JASPAR yes 52958376
chr17 7855161 7855172 EBF1 JASPAR yes 21193340
chr17 7855161 7855172 EBF1 JASPAR yes 52958377
chr17 7855161 7855175 EBF1 JASPAR yes 21193341
chr17 7855161 7855175 EBF1 JASPAR yes 52958378
chr17 7855163 7855174 EBF1 JASPAR yes 21193342
chr17 7855163 7855174 EBF1 JASPAR yes 52958379
chr17 7855167 7855188 ZNF263 JASPAR yes 21193343
chr17 7855167 7855188 ZNF263 JASPAR yes 52958380
chr17 7855174 7855178 LFA1 TRANSFAC yes 21193344
chr17 7855174 7855178 LFA1 TRANSFAC yes 52958381
chr17 7855178 7855199 ZNF263 JASPAR yes 21193345
chr17 7855178 7855199 ZNF263 JASPAR yes 52958382
chr17 7855179 7855184 ETS2 TRANSFAC yes 21193346
chr17 7855179 7855184 ETS2 TRANSFAC yes 52958383
chr17 7855199 7855214 TP53 JASPAR yes 21193347
chr17 7855199 7855214 TP53 JASPAR yes 52958384
chr17 7855225 7855237 NHLH1 JASPAR yes 21193348
chr17 7855225 7855237 NHLH1 JASPAR yes 52958385
chr17 7855226 7855236 NHLH1 JASPAR yes 21193349
chr17 7855226 7855236 TFAP4 JASPAR yes 21193350
chr17 7855226 7855236 NHLH1 JASPAR yes 52958386
chr17 7855226 7855236 TFAP4 JASPAR yes 52958387
chr17 7855229 7855240 NFE2L2 JASPAR yes 21193351
chr17 7855229 7855240 NFE2L2 JASPAR yes 52958388
SNP sites on vista23892[chr17:7854986-7855236]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 7855151 rs77907213 G A
MYB NKX3-1
4731793
Genes possibly regulated by vista23892[chr17:7854986-7855236]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7758383 7759417 + TMEM88 ENSG00000167874.6 7758383 0.78 1.0 15391 3397
chr17 7760003 7788556 - LSMD1 ENSG00000183011.9 7788556 0.86 1.0 15392 33570
chr17 7761064 7765600 + CYB5D1 ENSG00000182224.7 7761064 0.74 0.99 15393 6078
chr17 7788124 7816078 + CHD3 ENSG00000170004.12 7788124 0.71 1.0 15394 33138
chr17 7825177 7833121 - KCNAB3 ENSG00000170049.5 7833121 0.93 1.0 15395 78135
chr17 7829249 7833940 - RP11-1099M24.7 ENSG00000262730.1 7833940 1.0 1.0 15396 78954
chr17 7833663 7835441 - TRAPPC1 ENSG00000170043.7 7835441 0.73 0.99 15397 80455
chr17 7835419 7853236 + CNTROB ENSG00000170037.9 7835419 0.74 1.0 15398 80433
chr17 7905912 7923657 + GUCY2D ENSG00000132518.6 7905912 0.94 1.0 15399 49324
chr17 7942335 7952452 + ALOX15B ENSG00000179593.11 7942335 0.92 0.96 15400 12901
Expression level of Genes
Back to top
miRNAs possibly regulated by vista23892[chr17:7854986-7855236]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results