EnhancerDB
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  3. vista23896[chr17:8041932-8042438]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23896[chr17:8041932-8042438]
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Tissue distribution of vista23896
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Transcription factor that possibly regulate vista23896[chr17:8041932-8042438]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 8041744 8042060 EBF1 UCSC Txn Factor no Conserved 108236143
chr17 8041834 8043238 POLR2A UCSC Txn Factor no Conserved 108236149
chr17 8041845 8042244 CTCF UCSC Txn Factor no Conserved 108236151
chr17 8041914 8042219 SMC3 UCSC Txn Factor no Conserved 108236166
chr17 8041924 8042228 RAD21 UCSC Txn Factor no Conserved 108236170
chr17 8041940 8043043 ATF3 UCSC Txn Factor no Conserved 108236188
chr17 8041993 8043066 RPC155 UCSC Txn Factor no Conserved 108236215
chr17 8041994 8042514 E2F4 UCSC Txn Factor no Conserved 108236217
chr17 8042058 8043005 ETS1 UCSC Txn Factor no Conserved 108236233
chr17 8042064 8042511 TBP UCSC Txn Factor no Conserved 108236236
chr17 8042081 8042335 GTF3C2 UCSC Txn Factor no Conserved 108236242
chr17 8042171 8042441 BDP1 UCSC Txn Factor no Conserved 108236303
chr17 8042225 8042646 TAF1 UCSC Txn Factor no Conserved 108236331
chr17 8042285 8042634 CTCF UCSC Txn Factor no Conserved 108236359
chr17 8041932 8041949 BCL6B JASPAR yes 21193547
chr17 8041932 8041949 BCL6B JASPAR yes 52968089
chr17 8041938 8041944 PEA3 TRANSFAC yes 21193548
chr17 8041938 8041944 PEA3 TRANSFAC yes 52968090
chr17 8041947 8041950 MYB TRANSFAC yes 21193549
chr17 8041947 8041950 MYB TRANSFAC yes 52968091
chr17 8041970 8041989 PAX5 JASPAR yes 21193550
chr17 8041970 8041989 PAX5 JASPAR yes 52968092
chr17 8041999 8042004 MYB TRANSFAC yes 21193551
chr17 8041999 8042004 MYB TRANSFAC yes 52968093
chr17 8042013 8042019 TBP TRANSFAC yes 21193552
chr17 8042013 8042019 TBP TRANSFAC yes 52968094
chr17 8042027 8042045 RARA JASPAR yes 21193553
chr17 8042027 8042045 RARA JASPAR yes 52968095
chr17 8042046 8042065 CTCF JASPAR yes 21193554
chr17 8042046 8042065 CTCF JASPAR yes 52968096
chr17 8042072 8042076 H4TF2 TRANSFAC yes 21193555
chr17 8042072 8042076 H4TF2 TRANSFAC yes 52968097
chr17 8042103 8042118 ZBTB33 JASPAR yes 21193556
chr17 8042103 8042118 ZBTB33 JASPAR yes 52968098
chr17 8042106 8042120 E2F7 JASPAR yes 21193557
chr17 8042106 8042120 E2F7 JASPAR yes 52968099
chr17 8042107 8042110 MYB TRANSFAC yes 21193558
chr17 8042107 8042110 MYB TRANSFAC yes 52968100
chr17 8042108 8042119 E2F1 JASPAR yes 21193559
chr17 8042108 8042119 E2F1 JASPAR yes 52968101
chr17 8042109 8042120 E2F4 JASPAR yes 21193560
chr17 8042109 8042120 E2F6 JASPAR yes 21193561
chr17 8042109 8042120 E2F4 JASPAR yes 52968102
chr17 8042109 8042120 E2F6 JASPAR yes 52968103
chr17 8042125 8042130 ETS2 TRANSFAC yes 21193562
chr17 8042125 8042130 ETS2 TRANSFAC yes 52968104
chr17 8042127 8042142 HSF1 JASPAR yes 21193563
chr17 8042127 8042142 HSF1 JASPAR yes 52968105
chr17 8042128 8042141 HSF4 JASPAR yes 21193564
chr17 8042128 8042141 HSF4 JASPAR yes 52968106
chr17 8042133 8042148 FOXP1 JASPAR yes 21193565
chr17 8042133 8042148 FOXP1 JASPAR yes 52968107
chr17 8042136 8042147 FOXP2 JASPAR yes 21193566
chr17 8042136 8042147 FOXP2 JASPAR yes 52968108
chr17 8042138 8042147 SRY JASPAR yes 21193567
chr17 8042138 8042147 SRY JASPAR yes 52968109
chr17 8042154 8042159 ETS2 TRANSFAC yes 21193568
chr17 8042154 8042159 ETS2 TRANSFAC yes 52968110
chr17 8042158 8042169 EBF1 JASPAR yes 21193569
chr17 8042158 8042169 EBF1 JASPAR yes 52968111
chr17 8042176 8042188 FOXI1 JASPAR yes 21193570
chr17 8042176 8042188 FOXI1 JASPAR yes 52968112
chr17 8042215 8042226 NRF1 JASPAR yes 21193571
chr17 8042215 8042226 NRF1 JASPAR yes 52968113
chr17 8042224 8042237 NFKB2 JASPAR yes 21193572
chr17 8042224 8042237 NFKB2 JASPAR yes 52968114
chr17 8042226 8042237 NFKB1 JASPAR yes 21193573
chr17 8042226 8042237 NFKB1 JASPAR yes 52968115
chr17 8042240 8042245 H4TF1 TRANSFAC yes 21193574
chr17 8042240 8042245 H4TF1 TRANSFAC yes 52968116
chr17 8042259 8042262 MYB TRANSFAC yes 21193575
chr17 8042259 8042262 MYB TRANSFAC yes 52968117
chr17 8042269 8042275 YY1 JASPAR yes 21193576
chr17 8042269 8042275 YY1 JASPAR yes 52968118
chr17 8042279 8042291 HINFP JASPAR yes 21193577
chr17 8042279 8042291 HINFP JASPAR yes 52968119
chr17 8042288 8042292 NFE TRANSFAC yes 21193578
chr17 8042288 8042292 NFE TRANSFAC yes 52968120
chr17 8042311 8042326 RFX5 JASPAR yes 21193579
chr17 8042311 8042326 RFX5 JASPAR yes 52968121
chr17 8042315 8042319 NFE TRANSFAC yes 21193580
chr17 8042315 8042319 NFE TRANSFAC yes 52968122
chr17 8042323 8042328 SP1 TRANSFAC yes 21193581
chr17 8042323 8042328 SP1 TRANSFAC yes 52968123
chr17 8042343 8042348 SP1 TRANSFAC yes 21193582
chr17 8042343 8042348 SP1 TRANSFAC yes 52968124
chr17 8042353 8042358 SP1 TRANSFAC yes 21193583
chr17 8042353 8042358 SP1 TRANSFAC yes 52968125
chr17 8042405 8042423 ESR1 JASPAR yes 21193584
chr17 8042405 8042423 ESR1 JASPAR yes 52968126
chr17 8042424 8042435 E2F6 JASPAR yes 21193585
chr17 8042424 8042435 E2F6 JASPAR yes 52968127
chr17 8042429 8042448 CTCF JASPAR yes 21193586
chr17 8042429 8042448 CTCF JASPAR yes 52968128
chr17 8042434 8042448 BATF3 JASPAR yes 21193587
chr17 8042434 8042448 BATF3 JASPAR yes 52968129
chr17 8042437 8042445 CREB1 JASPAR yes 21193588
chr17 8042437 8042445 CREB1 JASPAR yes 52968130
chr17 8042438 8042450 CREB1 JASPAR yes 21193589
chr17 8042438 8042450 CREB1 JASPAR yes 52968131
SNP sites on vista23896[chr17:8041932-8042438]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 8042012 rs76555643 A G
ATF3 CTCF E2F4 EBF1 POLR2A RAD21 RPC155 SMC3
4733179
chr17 8042014 rs148590010 T C
ATF3 CTCF E2F4 EBF1 POLR2A RAD21 RPC155 SMC3 TBP
4733180
chr17 8042097 rs78508422 G A
ATF3 CTCF E2F4 ETS1 GTF3C2 POLR2A RAD21 RPC155 SMC3 TBP
4733181
chr17 8042131 rs9901632 A G
ATF3 CTCF E2F4 ETS1 GTF3C2 HSF1 HSF4 POLR2A RAD21 RPC155 SMC3 TBP
4733182
chr17 8042161 rs185499002 C T
ATF3 CTCF E2F4 EBF1 ETS1 GTF3C2 POLR2A RAD21 RPC155 SMC3 TBP
4733183
chr17 8042197 rs142001127 G A
ATF3 BDP1 CTCF E2F4 ETS1 GTF3C2 POLR2A RAD21 RPC155 SMC3 TBP
4733184
chr17 8042283 rs146132005 C T
ATF3 BDP1 E2F4 ETS1 GTF3C2 HINFP POLR2A RPC155 TAF1 TBP
4733185
chr17 8042288 rs536329325 G A
ATF3 BDP1 CTCF E2F4 ETS1 GTF3C2 HINFP NFE POLR2A RPC155 TAF1 TBP
4733186
chr17 8042289 rs7217137 C A,G,T
ATF3 BDP1 CTCF E2F4 ETS1 GTF3C2 HINFP NFE POLR2A RPC155 TAF1 TBP
4733187
chr17 8042293 rs112502892 C T
ATF3 BDP1 CTCF E2F4 ETS1 GTF3C2 POLR2A RPC155 TAF1 TBP
4733188
chr17 8042298 rs117418466 C G
ATF3 BDP1 CTCF E2F4 ETS1 GTF3C2 POLR2A RPC155 TAF1 TBP
4733189
chr17 8042347 rs559675413 C G
ATF3 BDP1 CTCF E2F4 ETS1 POLR2A RPC155 SP1 TAF1 TBP
4733190
chr17 8042350 rs71371830 G C
ATF3 BDP1 CTCF E2F4 ETS1 POLR2A RPC155 TAF1 TBP
4733191
chr17 8042356 rs542329225 G A
ATF3 BDP1 CTCF E2F4 ETS1 POLR2A RPC155 SP1 TAF1 TBP
4733192
chr17 8042357 rs560663250 C G
ATF3 BDP1 CTCF E2F4 ETS1 POLR2A RPC155 SP1 TAF1 TBP
4733193
chr17 8042360 rs113151380 G A
ATF3 BDP1 CTCF E2F4 ETS1 POLR2A RPC155 TAF1 TBP
4733194
chr17 8042414 rs143741077 C T
ATF3 BDP1 CTCF E2F4 ESR1 ETS1 POLR2A RPC155 TAF1 TBP
4733195
Genes possibly regulated by vista23896[chr17:8041932-8042438]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7942335 7952452 + ALOX15B ENSG00000179593.11 7942335 0.92 0.96 15400 403
chr17 7975954 7991021 - ALOX12B ENSG00000179477.5 7991021 0.86 1.0 15401 49089
chr17 7982800 7984883 + AC129492.6 ENSG00000214999.3 7982800 0.85 1.0 15402 40868
chr17 7999218 8022365 - ALOXE3 ENSG00000179148.5 8022365 0.98 1.0 15403 80433
chr17 8023908 8027410 - HES7 ENSG00000179111.4 8027410 0.81 0.97 15404 85478
chr17 8043790 8059824 - PER1 ENSG00000179094.9 8059824 0.77 1.0 15405 82614
chr17 8054134 8066293 - RP11-599B13.6 ENSG00000263620.1 8066293 0.97 0.94 15406 76145
chr17 8062467 8066864 - VAMP2 ENSG00000220205.4 8066864 0.72 1.0 15407 75574
chr17 8076555 8079717 - TMEM107 ENSG00000179029.10 8079717 0.7 1.0 15408 62721
chr17 8091652 8093564 - C17orf59 ENSG00000196544.6 8093564 0.63 1.0 15409 48874
chr17 8108056 8113918 - AURKB ENSG00000178999.8 8113918 0.95 1.0 15410 28520
Expression level of Genes
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miRNAs possibly regulated by vista23896[chr17:8041932-8042438]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 8048312 8048333 - hsa-miR-6883-3p MIMAT0027667 8055712 0.0015131943162945193 0.0 0.0 662
Expression level of miRNAs
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