EnhancerDB
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  3. vista23897[chr17:8056609-8057167]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23897[chr17:8056609-8057167]
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Tissue distribution of vista23897
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Transcription factor that possibly regulate vista23897[chr17:8056609-8057167]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 8054208 8060681 POLR2A UCSC Txn Factor no Conserved 108236379
chr17 8054208 8060681 POLR2A UCSC Txn Factor no Conserved 108236380
chr17 8056904 8057179 USF1 UCSC Txn Factor no Conserved 108236570
chr17 8056908 8057178 USF2 UCSC Txn Factor no Conserved 108236573
chr17 8056597 8056609 TEAD1 JASPAR yes 21193590
chr17 8056597 8056609 TEAD1 JASPAR yes 52969830
chr17 8056626 8056630 YY1 TRANSFAC yes 21193591
chr17 8056626 8056630 YY1 TRANSFAC yes 52969832
chr17 8056626 8056636 NFATC3 JASPAR yes 21193592
chr17 8056626 8056636 NFATC3 JASPAR yes 52969833
chr17 8056632 8056647 STAT1 JASPAR yes 21193593
chr17 8056632 8056647 STAT1 JASPAR yes 52969834
chr17 8056634 8056645 STAT3 JASPAR yes 21193594
chr17 8056634 8056645 STAT3 JASPAR yes 52969835
chr17 8056637 8056658 IRF1 JASPAR yes 21193595
chr17 8056637 8056658 IRF1 JASPAR yes 52969836
chr17 8056639 8056646 NFATC2 JASPAR yes 21193596
chr17 8056639 8056646 NFATC2 JASPAR yes 52969837
chr17 8056641 8056655 SPIC JASPAR yes 21193597
chr17 8056641 8056655 STAT1 JASPAR yes 21193598
chr17 8056641 8056655 SPIC JASPAR yes 52969838
chr17 8056641 8056655 STAT1 JASPAR yes 52969839
chr17 8056641 8056656 PRDM1 JASPAR yes 21193599
chr17 8056641 8056656 STAT2 JASPAR yes 21193600
chr17 8056641 8056656 PRDM1 JASPAR yes 52969840
chr17 8056641 8056656 STAT2 JASPAR yes 52969841
chr17 8056641 8056659 IRF2 JASPAR yes 21193601
chr17 8056641 8056659 IRF2 JASPAR yes 52969842
chr17 8056646 8056660 IRF7 JASPAR yes 21193602
chr17 8056646 8056660 IRF7 JASPAR yes 52969843
chr17 8056647 8056661 STAT1 JASPAR yes 21193603
chr17 8056647 8056661 STAT1 JASPAR yes 52969844
chr17 8056648 8056660 IRF1 JASPAR yes 21193604
chr17 8056648 8056660 IRF1 JASPAR yes 52969845
chr17 8056663 8056668 SP1 TRANSFAC yes 21193605
chr17 8056663 8056668 SP1 TRANSFAC yes 52969846
chr17 8056663 8056677 PLAG1 JASPAR yes 21193606
chr17 8056663 8056677 PLAG1 JASPAR yes 52969847
chr17 8056677 8056682 ATF1 TRANSFAC yes 21193607
chr17 8056677 8056682 ATF1 TRANSFAC yes 52969848
chr17 8056684 8056688 NFE TRANSFAC yes 21193608
chr17 8056684 8056688 NFE TRANSFAC yes 52969849
chr17 8056701 8056712 EBF1 JASPAR yes 21193609
chr17 8056701 8056712 EBF1 JASPAR yes 52969850
chr17 8056704 8056725 REST JASPAR yes 21193610
chr17 8056704 8056725 REST JASPAR yes 52969851
chr17 8056705 8056724 REST JASPAR yes 21193611
chr17 8056705 8056724 REST JASPAR yes 52969852
chr17 8056725 8056735 MAX JASPAR yes 21193612
chr17 8056725 8056735 MAX JASPAR yes 52969853
chr17 8056725 8056737 HES5 JASPAR yes 21193613
chr17 8056725 8056737 PKNOX1 JASPAR yes 21193614
chr17 8056725 8056737 PKNOX2 JASPAR yes 21193615
chr17 8056725 8056737 TGIF1 JASPAR yes 21193616
chr17 8056725 8056737 TGIF2 JASPAR yes 21193617
chr17 8056725 8056737 HES5 JASPAR yes 52969854
chr17 8056725 8056737 PKNOX1 JASPAR yes 52969855
chr17 8056725 8056737 PKNOX2 JASPAR yes 52969856
chr17 8056725 8056737 TGIF1 JASPAR yes 52969857
chr17 8056725 8056737 TGIF2 JASPAR yes 52969858
chr17 8056736 8056750 ONECUT1 JASPAR yes 21193618
chr17 8056736 8056750 ONECUT2 JASPAR yes 21193619
chr17 8056736 8056750 ONECUT3 JASPAR yes 21193620
chr17 8056736 8056750 ONECUT1 JASPAR yes 52969859
chr17 8056736 8056750 ONECUT2 JASPAR yes 52969860
chr17 8056736 8056750 ONECUT3 JASPAR yes 52969861
chr17 8056739 8056749 CUX1 JASPAR yes 21193621
chr17 8056739 8056749 CUX2 JASPAR yes 21193622
chr17 8056739 8056749 CUX1 JASPAR yes 52969862
chr17 8056739 8056749 CUX2 JASPAR yes 52969863
chr17 8056740 8056754 FOXF2 JASPAR yes 21193623
chr17 8056740 8056754 FOXF2 JASPAR yes 52969864
chr17 8056745 8056753 FOXG1 JASPAR yes 21193624
chr17 8056745 8056753 FOXG1 JASPAR yes 52969865
chr17 8056754 8056769 FOXP1 JASPAR yes 21193625
chr17 8056754 8056769 FOXP1 JASPAR yes 52969866
chr17 8056755 8056770 FOXP1 JASPAR yes 21193626
chr17 8056755 8056770 FOXP1 JASPAR yes 52969867
chr17 8056756 8056771 FOXP1 JASPAR yes 21193627
chr17 8056756 8056771 FOXP1 JASPAR yes 52969868
chr17 8056774 8056779 GATA2 JASPAR yes 21193628
chr17 8056774 8056779 GATA2 JASPAR yes 52969869
chr17 8056782 8056787 TFAP2A TRANSFAC yes 21193629
chr17 8056782 8056787 TFAP2A TRANSFAC yes 52969870
chr17 8056782 8056788 MZF1 JASPAR yes 21193630
chr17 8056782 8056788 MZF1 JASPAR yes 52969871
chr17 8056782 8056803 ZNF263 JASPAR yes 21193631
chr17 8056782 8056803 ZNF263 JASPAR yes 52969872
chr17 8056786 8056797 TBX20 JASPAR yes 21193632
chr17 8056786 8056797 TBX20 JASPAR yes 52969873
chr17 8056787 8056795 TBX15 JASPAR yes 21193633
chr17 8056787 8056795 TBX15 JASPAR yes 52969874
chr17 8056787 8056798 E2F6 JASPAR yes 21193634
chr17 8056787 8056798 E2F6 JASPAR yes 52969875
chr17 8056788 8056793 SP1 TRANSFAC yes 21193635
chr17 8056788 8056793 SP1 TRANSFAC yes 52969876
chr17 8056798 8056809 FOXA1 JASPAR yes 21193636
chr17 8056798 8056809 FOXA1 JASPAR yes 52969877
chr17 8056798 8056813 FOXA1 JASPAR yes 21193637
chr17 8056798 8056813 FOXA1 JASPAR yes 52969878
chr17 8056805 8056820 PRDM1 JASPAR yes 21193638
chr17 8056805 8056820 PRDM1 JASPAR yes 52969879
chr17 8056816 8056826 SP1 JASPAR yes 21193639
chr17 8056816 8056826 SP1 JASPAR yes 52969880
chr17 8056817 8056827 SP1 JASPAR yes 21193640
chr17 8056817 8056827 SP1 JASPAR yes 52969881
chr17 8056839 8056857 MAFF JASPAR yes 21193641
chr17 8056839 8056857 MAFF JASPAR yes 52969882
chr17 8056872 8056876 LFA1 TRANSFAC yes 21193642
chr17 8056872 8056876 LFA1 TRANSFAC yes 52969883
chr17 8056885 8056896 CDX2 JASPAR yes 21193643
chr17 8056885 8056896 CDX2 JASPAR yes 52969884
chr17 8056886 8056897 HOXA10 JASPAR yes 21193644
chr17 8056886 8056897 HOXA10 JASPAR yes 52969885
chr17 8056887 8056896 CDX1 JASPAR yes 21193645
chr17 8056887 8056896 CDX1 JASPAR yes 52969886
chr17 8056887 8056897 HOXA13 JASPAR yes 21193646
chr17 8056887 8056897 HOXB13 JASPAR yes 21193647
chr17 8056887 8056897 HOXD13 JASPAR yes 21193648
chr17 8056887 8056897 HOXA13 JASPAR yes 52969887
chr17 8056887 8056897 HOXB13 JASPAR yes 52969888
chr17 8056887 8056897 HOXD13 JASPAR yes 52969889
chr17 8056901 8056922 REST JASPAR yes 21193649
chr17 8056901 8056922 REST JASPAR yes 52969890
chr17 8056926 8056936 SP1 JASPAR yes 21193650
chr17 8056926 8056936 SP1 JASPAR yes 52969891
chr17 8056933 8056939 SP1 TRANSFAC yes 21193651
chr17 8056933 8056939 SP1 TRANSFAC yes 52969892
chr17 8056941 8056962 REST JASPAR yes 21193652
chr17 8056941 8056962 REST JASPAR yes 52969893
chr17 8056971 8056986 STAT1 JASPAR yes 21193653
chr17 8056971 8056986 STAT1 JASPAR yes 52969894
chr17 8056971 8056990 RFX2 JASPAR yes 21193654
chr17 8056971 8056990 RFX2 JASPAR yes 52969895
chr17 8057010 8057022 NHLH1 JASPAR yes 21193655
chr17 8057010 8057022 NHLH1 JASPAR yes 52969896
chr17 8057011 8057021 MSC JASPAR yes 21193656
chr17 8057011 8057021 NHLH1 JASPAR yes 21193657
chr17 8057011 8057021 MSC JASPAR yes 52969897
chr17 8057011 8057021 NHLH1 JASPAR yes 52969898
chr17 8057017 8057031 BATF3 JASPAR yes 21193658
chr17 8057017 8057031 BATF3 JASPAR yes 52969899
chr17 8057018 8057030 JDP2 JASPAR yes 21193659
chr17 8057018 8057030 JDP2 JASPAR yes 52969900
chr17 8057019 8057032 DUXA JASPAR yes 21193660
chr17 8057019 8057032 DUXA JASPAR yes 52969901
chr17 8057028 8057044 GLIS1 JASPAR yes 21193661
chr17 8057028 8057044 GLIS1 JASPAR yes 52969902
chr17 8057035 8057048 NFKB2 JASPAR yes 21193662
chr17 8057035 8057048 NFKB2 JASPAR yes 52969903
chr17 8057036 8057047 NFKB1 JASPAR yes 21193663
chr17 8057036 8057047 NFKB1 JASPAR yes 52969904
chr17 8057037 8057041 LFA1 TRANSFAC yes 21193664
chr17 8057037 8057041 LFA1 TRANSFAC yes 52969905
chr17 8057051 8057055 NFE TRANSFAC yes 21193665
chr17 8057051 8057055 NFE TRANSFAC yes 52969906
chr17 8057051 8057065 CREB3 JASPAR yes 21193666
chr17 8057051 8057065 CREB3L1 JASPAR yes 21193667
chr17 8057051 8057065 CREB3 JASPAR yes 52969907
chr17 8057051 8057065 CREB3L1 JASPAR yes 52969908
chr17 8057052 8057062 MAX JASPAR yes 21193668
chr17 8057052 8057062 MAX JASPAR yes 52969909
chr17 8057052 8057063 USF1 JASPAR yes 21193669
chr17 8057052 8057063 USF2 JASPAR yes 21193670
chr17 8057052 8057063 USF1 JASPAR yes 52969910
chr17 8057052 8057063 USF2 JASPAR yes 52969911
chr17 8057052 8057064 HES7 JASPAR yes 21193671
chr17 8057052 8057064 HES7 JASPAR yes 52969912
chr17 8057053 8057063 BHLHE40 JASPAR yes 21193672
chr17 8057053 8057063 BHLHE41 JASPAR yes 21193673
chr17 8057053 8057063 HEY1 JASPAR yes 21193674
chr17 8057053 8057063 HEY2 JASPAR yes 21193675
chr17 8057053 8057063 MAX JASPAR yes 21193676
chr17 8057053 8057063 MLXIPL JASPAR yes 21193677
chr17 8057053 8057063 MLX JASPAR yes 21193678
chr17 8057053 8057063 MNT JASPAR yes 21193679
chr17 8057053 8057063 SREBF2 JASPAR yes 21193680
chr17 8057053 8057063 TFE3 JASPAR yes 21193681
chr17 8057053 8057063 TFEB JASPAR yes 21193682
chr17 8057053 8057063 TFEC JASPAR yes 21193683
chr17 8057053 8057063 BHLHE40 JASPAR yes 52969913
chr17 8057053 8057063 BHLHE41 JASPAR yes 52969914
chr17 8057053 8057063 HEY1 JASPAR yes 52969915
chr17 8057053 8057063 HEY2 JASPAR yes 52969916
chr17 8057053 8057063 MAX JASPAR yes 52969917
chr17 8057053 8057063 MLXIPL JASPAR yes 52969918
chr17 8057053 8057063 MLX JASPAR yes 52969919
chr17 8057053 8057063 MNT JASPAR yes 52969920
chr17 8057053 8057063 SREBF2 JASPAR yes 52969921
chr17 8057053 8057063 TFE3 JASPAR yes 52969922
chr17 8057053 8057063 TFEB JASPAR yes 52969923
chr17 8057053 8057063 TFEC JASPAR yes 52969924
chr17 8057053 8057064 USF1 JASPAR yes 21193684
chr17 8057053 8057064 USF2 JASPAR yes 21193685
chr17 8057053 8057064 USF1 JASPAR yes 52969925
chr17 8057053 8057064 USF2 JASPAR yes 52969926
chr17 8057054 8057064 MAX JASPAR yes 21193686
chr17 8057054 8057064 MAX JASPAR yes 52969927
chr17 8057055 8057060 MYC TRANSFAC yes 21193687
chr17 8057055 8057060 USF1 TRANSFAC yes 21193688
chr17 8057055 8057060 USF2 TRANSFAC yes 21193689
chr17 8057055 8057060 MYC TRANSFAC yes 52969928
chr17 8057055 8057060 USF1 TRANSFAC yes 52969929
chr17 8057055 8057060 USF2 TRANSFAC yes 52969930
chr17 8057055 8057062 USF1 JASPAR yes 21193690
chr17 8057055 8057062 USF1 JASPAR yes 52969931
chr17 8057075 8057084 SOX9 JASPAR yes 21193691
chr17 8057075 8057084 SOX9 JASPAR yes 52969932
chr17 8057078 8057099 ZNF263 JASPAR yes 21193692
chr17 8057078 8057099 ZNF263 JASPAR yes 52969933
chr17 8057082 8057103 ZNF263 JASPAR yes 21193693
chr17 8057082 8057103 ZNF263 JASPAR yes 52969934
chr17 8057083 8057104 ZNF263 JASPAR yes 21193694
chr17 8057083 8057104 ZNF263 JASPAR yes 52969935
chr17 8057084 8057089 ETS2 TRANSFAC yes 21193695
chr17 8057084 8057089 ETS2 TRANSFAC yes 52969936
chr17 8057089 8057106 RXRA JASPAR yes 21193696
chr17 8057089 8057106 RXRA JASPAR yes 52969937
chr17 8057097 8057103 MAZ TRANSFAC yes 21193697
chr17 8057097 8057103 MAZ TRANSFAC yes 52969938
chr17 8057109 8057116 NFATC2 JASPAR yes 21193698
chr17 8057109 8057116 NFATC2 JASPAR yes 52969939
chr17 8057131 8057146 HNF1A JASPAR yes 21193699
chr17 8057131 8057146 HNF1A JASPAR yes 52969940
chr17 8057132 8057145 HNF1B JASPAR yes 21193700
chr17 8057132 8057145 HNF1B JASPAR yes 52969941
chr17 8057134 8057138 TEAD2 TRANSFAC yes 21193701
chr17 8057134 8057138 TEAD2 TRANSFAC yes 52969942
chr17 8057134 8057139 TBP TRANSFAC yes 21193702
chr17 8057134 8057139 TBP TRANSFAC yes 52969943
chr17 8057134 8057140 TMF TRANSFAC yes 21193703
chr17 8057134 8057140 TMF TRANSFAC yes 52969944
chr17 8057141 8057144 MYB TRANSFAC yes 21193704
chr17 8057141 8057144 MYB TRANSFAC yes 52969945
chr17 8057145 8057166 IRF1 JASPAR yes 21193705
chr17 8057145 8057166 IRF1 JASPAR yes 52969946
chr17 8057147 8057162 IRF9 JASPAR yes 21193706
chr17 8057147 8057162 IRF9 JASPAR yes 52969947
chr17 8057148 8057162 ONECUT2 JASPAR yes 21193707
chr17 8057148 8057162 ONECUT3 JASPAR yes 21193708
chr17 8057148 8057162 ONECUT2 JASPAR yes 52969948
chr17 8057148 8057162 ONECUT3 JASPAR yes 52969949
chr17 8057149 8057163 STAT1 JASPAR yes 21193709
chr17 8057149 8057163 STAT1 JASPAR yes 52969950
chr17 8057149 8057164 STAT2 JASPAR yes 21193710
chr17 8057149 8057164 STAT2 JASPAR yes 52969951
chr17 8057150 8057162 IRF1 JASPAR yes 21193711
chr17 8057150 8057162 IRF1 JASPAR yes 52969952
chr17 8057151 8057172 IRF1 JASPAR yes 21193712
chr17 8057151 8057172 IRF1 JASPAR yes 52969953
chr17 8057156 8057169 ELF1 JASPAR yes 21193713
chr17 8057156 8057169 ELF1 JASPAR yes 52969954
chr17 8057158 8057173 FOXP1 JASPAR yes 21193714
chr17 8057158 8057173 FOXP1 JASPAR yes 52969955
chr17 8057158 8057179 IRF1 JASPAR yes 21193715
chr17 8057158 8057179 IRF1 JASPAR yes 52969956
chr17 8057161 8057172 FOXP2 JASPAR yes 21193716
chr17 8057161 8057172 FOXP2 JASPAR yes 52969957
chr17 8057161 8057175 IRF7 JASPAR yes 21193717
chr17 8057161 8057175 IRF7 JASPAR yes 52969958
chr17 8057162 8057170 FOXO3 JASPAR yes 21193718
chr17 8057162 8057170 FOXO3 JASPAR yes 52969959
chr17 8057162 8057177 STAT2 JASPAR yes 21193719
chr17 8057162 8057177 STAT2 JASPAR yes 52969960
chr17 8057163 8057172 SRY JASPAR yes 21193720
chr17 8057163 8057172 SRY JASPAR yes 52969961
chr17 8057163 8057175 IRF1 JASPAR yes 21193721
chr17 8057163 8057175 IRF1 JASPAR yes 52969962
SNP sites on vista23897[chr17:8056609-8057167]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 8056642 rs544187304 GAA G
IRF1 IRF2 NFATC2 POLR2A PRDM1 SPIC STAT1 STAT2 STAT3
4733399
chr17 8056675 rs142176718 G A
PLAG1 POLR2A
4733400
chr17 8056799 rs58800523 G C
FOXA1 POLR2A ZNF263
4733401
chr17 8056824 rs115999583 G A
POLR2A SP1
4733402
chr17 8056840 rs71159551 TAA T
MAFF POLR2A
4733403
chr17 8056840 rs71359679 TAA T
MAFF POLR2A
4733404
chr17 8057049 rs374379539 TC T
POLR2A USF1 USF2
4733405
chr17 8057069 rs34275201 C A
POLR2A USF1 USF2
4733406
chr17 8057102 rs74757757 G A
MAZ POLR2A RXRA USF1 USF2 ZNF263
4733407
chr17 8057109 rs115745467 G A
NFATC2 POLR2A USF1 USF2
4733408
Genes possibly regulated by vista23897[chr17:8056609-8057167]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7975954 7991021 - ALOX12B ENSG00000179477.5 7991021 0.86 1.0 15401 34412
chr17 7982800 7984883 + AC129492.6 ENSG00000214999.3 7982800 0.85 1.0 15402 26191
chr17 7999218 8022365 - ALOXE3 ENSG00000179148.5 8022365 0.98 1.0 15403 65756
chr17 8023908 8027410 - HES7 ENSG00000179111.4 8027410 0.81 0.97 15404 70801
chr17 8043790 8059824 - PER1 ENSG00000179094.9 8059824 0.77 1.0 15405 97343
chr17 8054134 8066293 - RP11-599B13.6 ENSG00000263620.1 8066293 0.97 0.94 15406 90874
chr17 8062467 8066864 - VAMP2 ENSG00000220205.4 8066864 0.72 1.0 15407 90303
chr17 8076555 8079717 - TMEM107 ENSG00000179029.10 8079717 0.7 1.0 15408 77450
chr17 8091652 8093564 - C17orf59 ENSG00000196544.6 8093564 0.63 1.0 15409 63603
chr17 8108056 8113918 - AURKB ENSG00000178999.8 8113918 0.95 1.0 15410 43249
chr17 8130191 8151362 - CTC1 ENSG00000178971.9 8151362 0.78 1.0 15411 5805
chr17 8150936 8173809 + PFAS ENSG00000178921.9 8150936 0.81 0.99 15412 6231
Expression level of Genes
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miRNAs possibly regulated by vista23897[chr17:8056609-8057167]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 8048312 8048333 - hsa-miR-6883-3p MIMAT0027667 8055712 0.017741237559498052 0.0 0.0 662
Expression level of miRNAs
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