EnhancerDB
  1. Home
  2. Enhancers
  3. vista23899[chr17:8090038-8090540]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23899[chr17:8090038-8090540]
Back to top
Tissue distribution of vista23899
Back to top
Transcription factor that possibly regulate vista23899[chr17:8090038-8090540]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 8089396 8090451 POLR2A UCSC Txn Factor no Conserved 108236804
chr17 8089487 8091434 ATF3 UCSC Txn Factor no Conserved 108236805
chr17 8089487 8091434 ATF3 UCSC Txn Factor no Conserved 108236806
chr17 8089889 8090326 CTCF UCSC Txn Factor no Conserved 108236814
chr17 8089935 8091202 TBP UCSC Txn Factor no Conserved 108236818
chr17 8089935 8091202 TBP UCSC Txn Factor no Conserved 108236819
chr17 8089955 8091466 RPC155 UCSC Txn Factor no Conserved 108236830
chr17 8089955 8091466 RPC155 UCSC Txn Factor no Conserved 108236831
chr17 8090039 8090720 ETS1 UCSC Txn Factor no Conserved 108236871
chr17 8090133 8090726 GTF3C2 UCSC Txn Factor no Conserved 108236902
chr17 8090319 8090484 BDP1 UCSC Txn Factor no Conserved 108236948
chr17 8090048 8090067 REST JASPAR yes 21193846
chr17 8090048 8090067 REST JASPAR yes 52971129
chr17 8090072 8090077 ETS2 TRANSFAC yes 21193847
chr17 8090072 8090077 ETS2 TRANSFAC yes 52971130
chr17 8090083 8090097 MTF1 JASPAR yes 21193848
chr17 8090083 8090097 MTF1 JASPAR yes 52971131
chr17 8090092 8090113 REST JASPAR yes 21193849
chr17 8090092 8090113 REST JASPAR yes 52971132
chr17 8090106 8090125 CTCF JASPAR yes 21193850
chr17 8090106 8090125 CTCF JASPAR yes 52971133
chr17 8090109 8090118 ZEB1 JASPAR yes 21193851
chr17 8090109 8090118 ZEB1 JASPAR yes 52971134
chr17 8090110 8090120 TCF3 JASPAR yes 21193852
chr17 8090110 8090120 TCF4 JASPAR yes 21193853
chr17 8090110 8090120 TCF3 JASPAR yes 52971135
chr17 8090110 8090120 TCF4 JASPAR yes 52971136
chr17 8090111 8090120 SNAI2 JASPAR yes 21193854
chr17 8090111 8090120 SNAI2 JASPAR yes 52971137
chr17 8090112 8090117 USF2 TRANSFAC yes 21193855
chr17 8090112 8090117 USF2 TRANSFAC yes 52971138
chr17 8090116 8090127 ELF5 JASPAR yes 21193856
chr17 8090116 8090127 ELF5 JASPAR yes 52971139
chr17 8090117 8090128 ELK4 JASPAR yes 21193857
chr17 8090117 8090128 FLI1 JASPAR yes 21193858
chr17 8090117 8090128 ELK4 JASPAR yes 52971140
chr17 8090117 8090128 FLI1 JASPAR yes 52971141
chr17 8090118 8090126 EHF JASPAR yes 21193859
chr17 8090118 8090126 FEV JASPAR yes 21193860
chr17 8090118 8090126 EHF JASPAR yes 52971142
chr17 8090118 8090126 FEV JASPAR yes 52971143
chr17 8090119 8090126 SPI1 JASPAR yes 21193861
chr17 8090119 8090126 SPI1 JASPAR yes 52971144
chr17 8090135 8090156 ZNF263 JASPAR yes 21193862
chr17 8090135 8090156 ZNF263 JASPAR yes 52971145
chr17 8090152 8090171 REST JASPAR yes 21193863
chr17 8090152 8090171 REST JASPAR yes 52971146
chr17 8090152 8090172 ESR1 JASPAR yes 21193864
chr17 8090152 8090172 ESR1 JASPAR yes 52971147
chr17 8090153 8090157 LFA1 TRANSFAC yes 21193865
chr17 8090153 8090157 LFA1 TRANSFAC yes 52971148
chr17 8090171 8090185 MTF1 JASPAR yes 21193866
chr17 8090171 8090185 MTF1 JASPAR yes 52971149
chr17 8090174 8090178 NFE TRANSFAC yes 21193867
chr17 8090174 8090178 NFE TRANSFAC yes 52971150
chr17 8090216 8090225 PITX3 JASPAR yes 21193868
chr17 8090216 8090225 PITX3 JASPAR yes 52971151
chr17 8090216 8090226 GSC JASPAR yes 21193869
chr17 8090216 8090226 GSC JASPAR yes 52971152
chr17 8090222 8090231 SOX9 JASPAR yes 21193870
chr17 8090222 8090231 SOX9 JASPAR yes 52971153
chr17 8090268 8090273 ETS2 TRANSFAC yes 21193871
chr17 8090268 8090273 ETS2 TRANSFAC yes 52971154
chr17 8090268 8090276 FEV JASPAR yes 21193872
chr17 8090268 8090276 FEV JASPAR yes 52971155
chr17 8090269 8090276 SPI1 JASPAR yes 21193873
chr17 8090269 8090276 SPI1 JASPAR yes 52971156
chr17 8090274 8090293 REST JASPAR yes 21193874
chr17 8090274 8090293 REST JASPAR yes 52971157
chr17 8090307 8090312 H4TF1 TRANSFAC yes 21193875
chr17 8090307 8090312 H4TF1 TRANSFAC yes 52971158
chr17 8090327 8090337 SREBF2 JASPAR yes 21193876
chr17 8090327 8090337 SREBF2 JASPAR yes 52971159
chr17 8090329 8090350 IRF1 JASPAR yes 21193877
chr17 8090329 8090350 IRF1 JASPAR yes 52971160
chr17 8090351 8090362 STAT3 JASPAR yes 21193878
chr17 8090351 8090362 STAT3 JASPAR yes 52971161
chr17 8090353 8090365 NHLH1 JASPAR yes 21193879
chr17 8090353 8090365 NHLH1 JASPAR yes 52971162
chr17 8090354 8090364 NHLH1 JASPAR yes 21193880
chr17 8090354 8090364 NHLH1 JASPAR yes 52971163
chr17 8090361 8090382 ZNF263 JASPAR yes 21193881
chr17 8090361 8090382 ZNF263 JASPAR yes 52971164
chr17 8090375 8090389 POU1F1 JASPAR yes 21193882
chr17 8090375 8090389 POU1F1 JASPAR yes 52971165
chr17 8090377 8090381 YY1 TRANSFAC yes 21193883
chr17 8090377 8090381 YY1 TRANSFAC yes 52971166
chr17 8090409 8090415 LEF1 TRANSFAC yes 21193884
chr17 8090409 8090415 SOX10 JASPAR yes 21193885
chr17 8090409 8090415 LEF1 TRANSFAC yes 52971167
chr17 8090409 8090415 SOX10 JASPAR yes 52971168
chr17 8090425 8090442 RXRA JASPAR yes 21193886
chr17 8090425 8090442 RXRA JASPAR yes 52971169
chr17 8090427 8090445 MAFF JASPAR yes 21193887
chr17 8090427 8090445 MAFF JASPAR yes 52971170
chr17 8090430 8090440 TFAP4 JASPAR yes 21193888
chr17 8090430 8090440 TFAP4 JASPAR yes 52971171
chr17 8090446 8090451 ETS2 TRANSFAC yes 21193889
chr17 8090446 8090451 ETS2 TRANSFAC yes 52971172
chr17 8090469 8090475 ETS1 JASPAR yes 21193890
chr17 8090469 8090475 ETS1 JASPAR yes 52971173
chr17 8090469 8090479 ELK1 JASPAR yes 21193891
chr17 8090469 8090479 ELK1 JASPAR yes 52971174
chr17 8090505 8090509 NFE TRANSFAC yes 21193892
chr17 8090505 8090509 NFE TRANSFAC yes 52971175
chr17 8090510 8090521 FOXP2 JASPAR yes 21193893
chr17 8090510 8090521 FOXP2 JASPAR yes 52971176
chr17 8090512 8090519 FOXD2 JASPAR yes 21193894
chr17 8090512 8090519 FOXI1 JASPAR yes 21193895
chr17 8090512 8090519 FOXL1 JASPAR yes 21193896
chr17 8090512 8090519 FOXO4 JASPAR yes 21193897
chr17 8090512 8090519 FOXO6 JASPAR yes 21193898
chr17 8090512 8090519 FOXP3 JASPAR yes 21193899
chr17 8090512 8090519 FOXD2 JASPAR yes 52971177
chr17 8090512 8090519 FOXI1 JASPAR yes 52971178
chr17 8090512 8090519 FOXL1 JASPAR yes 52971179
chr17 8090512 8090519 FOXO4 JASPAR yes 52971180
chr17 8090512 8090519 FOXO6 JASPAR yes 52971181
chr17 8090512 8090519 FOXP3 JASPAR yes 52971182
chr17 8090512 8090520 FOXD1 JASPAR yes 21193900
chr17 8090512 8090520 FOXO3 JASPAR yes 21193901
chr17 8090512 8090520 FOXD1 JASPAR yes 52971183
chr17 8090512 8090520 FOXO3 JASPAR yes 52971184
SNP sites on vista23899[chr17:8090038-8090540]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 8090049 rs116965141 G A
ATF3 CTCF ETS1 POLR2A REST RPC155 TBP
4733770
chr17 8090075 rs545606727 C T
ATF3 CTCF ETS1 ETS2 POLR2A RPC155 TBP
4733771
chr17 8090097 rs115464083 C G
ATF3 CTCF ETS1 MTF1 POLR2A REST RPC155 TBP
4733772
chr17 8090102 rs3027264 T C
ATF3 CTCF ETS1 POLR2A REST RPC155 TBP
4733773
chr17 8090150 rs72846410 C A,T
ATF3 CTCF ETS1 GTF3C2 POLR2A RPC155 TBP ZNF263
4733774
chr17 8090170 rs143262796 G A,C,T
ATF3 CTCF ESR1 ETS1 GTF3C2 POLR2A REST RPC155 TBP
4733775
chr17 8090172 rs146676790 G A
ATF3 CTCF ESR1 ETS1 GTF3C2 MTF1 POLR2A RPC155 TBP
4733776
chr17 8090173 rs115256578 G A,T
ATF3 CTCF ETS1 GTF3C2 MTF1 POLR2A RPC155 TBP
4733777
chr17 8090215 rs187621024 C G,T
ATF3 CTCF ETS1 GTF3C2 POLR2A RPC155 TBP
4733778
chr17 8090294 rs76800617 A G
ATF3 CTCF ETS1 GTF3C2 POLR2A RPC155 TBP
4733779
chr17 8090308 rs3027265 G T
ATF3 CTCF ETS1 GTF3C2 H4TF1 POLR2A RPC155 TBP
4733780
chr17 8090413 rs117736357 T A,C
ATF3 BDP1 ETS1 GTF3C2 LEF1 POLR2A RPC155 SOX10 TBP
4733781
chr17 8090454 rs140238552 C G,T
ATF3 BDP1 ETS1 GTF3C2 RPC155 TBP
4733782
chr17 8090466 rs188369903 C A,G,T
ATF3 BDP1 ETS1 GTF3C2 RPC155 TBP
4733783
chr17 8090469 rs559453496 C T
ATF3 BDP1 ELK1 ETS1 GTF3C2 RPC155 TBP
4733784
chr17 8090470 rs116366552 T C
ATF3 BDP1 ELK1 ETS1 GTF3C2 RPC155 TBP
4733785
chr17 8090480 rs8081189 C G,T
ATF3 BDP1 ETS1 GTF3C2 RPC155 TBP
4733786
chr17 8090483 rs117439952 C T
ATF3 BDP1 ETS1 GTF3C2 RPC155 TBP
4733787
Genes possibly regulated by vista23899[chr17:8090038-8090540]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7975954 7991021 - ALOX12B ENSG00000179477.5 7991021 0.86 1.0 15401 983
chr17 7999218 8022365 - ALOXE3 ENSG00000179148.5 8022365 0.98 1.0 15403 32327
chr17 8023908 8027410 - HES7 ENSG00000179111.4 8027410 0.81 0.97 15404 37372
chr17 8043790 8059824 - PER1 ENSG00000179094.9 8059824 0.77 1.0 15405 69786
chr17 8054134 8066293 - RP11-599B13.6 ENSG00000263620.1 8066293 0.97 0.94 15406 76255
chr17 8062467 8066864 - VAMP2 ENSG00000220205.4 8066864 0.72 1.0 15407 76826
chr17 8076555 8079717 - TMEM107 ENSG00000179029.10 8079717 0.7 1.0 15408 89679
chr17 8091652 8093564 - C17orf59 ENSG00000196544.6 8093564 0.63 1.0 15409 96976
chr17 8108056 8113918 - AURKB ENSG00000178999.8 8113918 0.95 1.0 15410 76622
chr17 8130191 8151362 - CTC1 ENSG00000178971.9 8151362 0.78 1.0 15411 39178
chr17 8150936 8173809 + PFAS ENSG00000178921.9 8150936 0.81 0.99 15412 39604
Expression level of Genes
Back to top
miRNAs possibly regulated by vista23899[chr17:8090038-8090540]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results