EnhancerDB
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  3. vista23900[chr17:8090795-8091158]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23900[chr17:8090795-8091158]
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Tissue distribution of vista23900
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Transcription factor that possibly regulate vista23900[chr17:8090795-8091158]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 8089487 8091434 ATF3 UCSC Txn Factor no Conserved 108236805
chr17 8089487 8091434 ATF3 UCSC Txn Factor no Conserved 108236806
chr17 8089935 8091202 TBP UCSC Txn Factor no Conserved 108236818
chr17 8089935 8091202 TBP UCSC Txn Factor no Conserved 108236819
chr17 8089955 8091466 RPC155 UCSC Txn Factor no Conserved 108236830
chr17 8089955 8091466 RPC155 UCSC Txn Factor no Conserved 108236831
chr17 8090749 8090933 BDP1 UCSC Txn Factor no Conserved 108237015
chr17 8090751 8091229 MYBL2 UCSC Txn Factor no Conserved 108237017
chr17 8090890 8091206 EBF1 UCSC Txn Factor no Conserved 108237084
chr17 8090955 8091244 E2F1 UCSC Txn Factor no Conserved 108237103
chr17 8091064 8091448 MAX UCSC Txn Factor no Conserved 108237128
chr17 8091121 8091361 USF1 UCSC Txn Factor no Conserved 108237140
chr17 8090789 8090809 RREB1 JASPAR yes 21193902
chr17 8090789 8090809 RREB1 JASPAR yes 52971198
chr17 8090791 8090811 RREB1 JASPAR yes 21193903
chr17 8090791 8090811 RREB1 JASPAR yes 52971199
chr17 8090797 8090818 IRF1 JASPAR yes 21193904
chr17 8090797 8090818 IRF1 JASPAR yes 52971200
chr17 8090803 8090818 FOXP1 JASPAR yes 21193905
chr17 8090803 8090818 FOXP1 JASPAR yes 52971201
chr17 8090804 8090815 FOXP2 JASPAR yes 21193906
chr17 8090804 8090815 FOXP2 JASPAR yes 52971202
chr17 8090804 8090819 STAT2 JASPAR yes 21193907
chr17 8090804 8090819 STAT2 JASPAR yes 52971203
chr17 8090806 8090814 FOXO3 JASPAR yes 21193908
chr17 8090806 8090814 FOXO3 JASPAR yes 52971204
chr17 8090806 8090817 FOXA1 JASPAR yes 21193909
chr17 8090806 8090817 FOXA1 JASPAR yes 52971205
chr17 8090806 8090820 STAT1 JASPAR yes 21193910
chr17 8090806 8090820 STAT1 JASPAR yes 52971206
chr17 8090807 8090819 IRF1 JASPAR yes 21193911
chr17 8090807 8090819 IRF1 JASPAR yes 52971207
chr17 8090812 8090816 YY1 TRANSFAC yes 21193912
chr17 8090812 8090816 YY1 TRANSFAC yes 52971208
chr17 8090812 8090827 STAT1 JASPAR yes 21193913
chr17 8090812 8090827 STAT1 JASPAR yes 52971209
chr17 8090814 8090825 STAT1 JASPAR yes 21193914
chr17 8090814 8090825 STAT1 JASPAR yes 52971210
chr17 8090816 8090827 HOXC13 JASPAR yes 21193915
chr17 8090816 8090827 HOXC13 JASPAR yes 52971211
chr17 8090845 8090859 E2F7 JASPAR yes 21193916
chr17 8090845 8090859 E2F7 JASPAR yes 52971212
chr17 8090846 8090860 EBF1 JASPAR yes 21193917
chr17 8090846 8090860 EBF1 JASPAR yes 52971213
chr17 8090872 8090875 MYB TRANSFAC yes 21193918
chr17 8090872 8090875 MYB TRANSFAC yes 52971214
chr17 8090873 8090885 FOXI1 JASPAR yes 21193919
chr17 8090873 8090885 FOXI1 JASPAR yes 52971215
chr17 8090882 8090897 MEF2A JASPAR yes 21193920
chr17 8090882 8090897 MEF2A JASPAR yes 52971216
chr17 8090883 8090898 MEF2C JASPAR yes 21193921
chr17 8090883 8090898 MEF2C JASPAR yes 52971217
chr17 8090886 8090890 YY1 TRANSFAC yes 21193922
chr17 8090886 8090890 YY1 TRANSFAC yes 52971218
chr17 8090895 8090914 RFX2 JASPAR yes 21193923
chr17 8090895 8090914 RFX2 JASPAR yes 52971219
chr17 8090897 8090912 RFX5 JASPAR yes 21193924
chr17 8090897 8090912 RFX5 JASPAR yes 52971220
chr17 8090922 8090927 MYC TRANSFAC yes 21193925
chr17 8090922 8090927 MYC TRANSFAC yes 52971221
chr17 8090946 8090949 MYB TRANSFAC yes 21193926
chr17 8090946 8090949 MYB TRANSFAC yes 52971222
chr17 8090951 8090962 ESRRA JASPAR yes 21193927
chr17 8090951 8090962 ESRRB JASPAR yes 21193928
chr17 8090951 8090962 ESRRA JASPAR yes 52971223
chr17 8090951 8090962 ESRRB JASPAR yes 52971224
chr17 8090986 8090991 MYB TRANSFAC yes 21193929
chr17 8090986 8090991 MYB TRANSFAC yes 52971225
chr17 8091035 8091038 MYB TRANSFAC yes 21193930
chr17 8091035 8091038 MYB TRANSFAC yes 52971226
chr17 8091038 8091052 EBF1 JASPAR yes 21193931
chr17 8091038 8091052 EBF1 JASPAR yes 52971227
chr17 8091040 8091051 EBF1 JASPAR yes 21193932
chr17 8091040 8091051 EBF1 JASPAR yes 52971228
chr17 8091044 8091049 TFAP2A TRANSFAC yes 21193933
chr17 8091044 8091049 TFAP2A TRANSFAC yes 52971229
chr17 8091044 8091050 MZF1 JASPAR yes 21193934
chr17 8091044 8091050 MZF1 JASPAR yes 52971230
chr17 8091050 8091066 E2F2 JASPAR yes 21193935
chr17 8091050 8091066 E2F2 JASPAR yes 52971231
chr17 8091062 8091066 YY1 TRANSFAC yes 21193936
chr17 8091062 8091066 YY1 TRANSFAC yes 52971232
chr17 8091067 8091071 H1TF2 TRANSFAC yes 21193937
chr17 8091067 8091071 NFE TRANSFAC yes 21193938
chr17 8091067 8091071 SRF TRANSFAC yes 21193939
chr17 8091067 8091071 H1TF2 TRANSFAC yes 52971233
chr17 8091067 8091071 NFE TRANSFAC yes 52971234
chr17 8091067 8091071 SRF TRANSFAC yes 52971235
chr17 8091096 8091108 TEAD1 JASPAR yes 21193940
chr17 8091096 8091108 TEAD1 JASPAR yes 52971236
chr17 8091121 8091128 SPIB JASPAR yes 21193941
chr17 8091121 8091128 SPIB JASPAR yes 52971237
chr17 8091121 8091132 FLI1 JASPAR yes 21193942
chr17 8091121 8091132 FLI1 JASPAR yes 52971238
chr17 8091121 8091142 ZNF263 JASPAR yes 21193943
chr17 8091121 8091142 ZNF263 JASPAR yes 52971239
chr17 8091122 8091130 EHF JASPAR yes 21193944
chr17 8091122 8091130 EHF JASPAR yes 52971240
chr17 8091155 8091163 NR4A2 JASPAR yes 21193945
chr17 8091155 8091163 NR4A2 JASPAR yes 52971241
chr17 8091155 8091170 HNF4A JASPAR yes 21193946
chr17 8091155 8091170 HNF4A JASPAR yes 52971242
chr17 8091156 8091171 HNF4G JASPAR yes 21193947
chr17 8091156 8091171 HNF4G JASPAR yes 52971243
SNP sites on vista23900[chr17:8090795-8091158]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 8090811 rs3027266 T C
ATF3 BDP1 FOXA1 FOXO3 FOXP1 FOXP2 IRF1 MYBL2 RPC155 RREB1 STAT1 STAT2 TBP
4733793
chr17 8090814 rs139100174 A G
ATF3 BDP1 FOXA1 FOXO3 FOXP1 FOXP2 IRF1 MYBL2 RPC155 STAT1 STAT2 TBP YY1
4733794
chr17 8090861 rs143002705 T C
ATF3 BDP1 MYBL2 RPC155 TBP
4733795
chr17 8090888 rs147447993 A G
ATF3 BDP1 MEF2A MEF2C MYBL2 RPC155 TBP YY1
4733796
chr17 8090892 rs574338609 C G,T
ATF3 BDP1 EBF1 MEF2A MEF2C MYBL2 RPC155 TBP
4733797
chr17 8090895 rs3027267 G A,C
ATF3 BDP1 EBF1 MEF2A MEF2C MYBL2 RFX2 RPC155 TBP
4733798
chr17 8090896 rs143271904 C CT
ATF3 BDP1 EBF1 MEF2A MEF2C MYBL2 RFX2 RPC155 TBP
4733799
chr17 8090896 rs189594759 C G,T
ATF3 BDP1 EBF1 MEF2A MEF2C MYBL2 RFX2 RPC155 TBP
4733800
chr17 8090899 rs528806472 T C
ATF3 BDP1 EBF1 MYBL2 RFX2 RFX5 RPC155 TBP
4733801
chr17 8090906 rs117755185 C G,T
ATF3 BDP1 EBF1 MYBL2 RFX2 RFX5 RPC155 TBP
4733802
chr17 8090908 rs1476161 A C,G
ATF3 BDP1 EBF1 MYBL2 RFX2 RFX5 RPC155 TBP
4733803
chr17 8090943 rs187152371 C T
ATF3 EBF1 MYBL2 RPC155 TBP
4733804
chr17 8090976 rs77463748 T A,C
ATF3 E2F1 EBF1 MYBL2 RPC155 TBP
4733805
chr17 8090987 rs60508138 A C,G,T
ATF3 E2F1 EBF1 MYB MYBL2 RPC155 TBP
4733806
chr17 8091004 rs534350761 G A,C
ATF3 E2F1 EBF1 MYBL2 RPC155 TBP
4733807
chr17 8091008 rs148661179 G C
ATF3 E2F1 EBF1 MYBL2 RPC155 TBP
4733808
chr17 8091039 rs3027268 C T
ATF3 E2F1 EBF1 MYBL2 RPC155 TBP
4733809
chr17 8091082 rs75230720 G T
ATF3 E2F1 EBF1 MAX MYBL2 RPC155 TBP
4733810
chr17 8091083 rs1476162 G A
ATF3 E2F1 EBF1 MAX MYBL2 RPC155 TBP
4733811
chr17 8091084 rs143331164 G A,C
ATF3 E2F1 EBF1 MAX MYBL2 RPC155 TBP
4733812
Genes possibly regulated by vista23900[chr17:8090795-8091158]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 7975954 7991021 - ALOX12B ENSG00000179477.5 7991021 0.86 1.0 15401 226
chr17 7999218 8022365 - ALOXE3 ENSG00000179148.5 8022365 0.98 1.0 15403 31570
chr17 8023908 8027410 - HES7 ENSG00000179111.4 8027410 0.81 0.97 15404 36615
chr17 8043790 8059824 - PER1 ENSG00000179094.9 8059824 0.77 1.0 15405 69029
chr17 8054134 8066293 - RP11-599B13.6 ENSG00000263620.1 8066293 0.97 0.94 15406 75498
chr17 8062467 8066864 - VAMP2 ENSG00000220205.4 8066864 0.72 1.0 15407 76069
chr17 8076555 8079717 - TMEM107 ENSG00000179029.10 8079717 0.7 1.0 15408 88922
chr17 8091652 8093564 - C17orf59 ENSG00000196544.6 8093564 0.63 1.0 15409 97594
chr17 8108056 8113918 - AURKB ENSG00000178999.8 8113918 0.95 1.0 15410 77240
chr17 8130191 8151362 - CTC1 ENSG00000178971.9 8151362 0.78 1.0 15411 39796
chr17 8150936 8173809 + PFAS ENSG00000178921.9 8150936 0.81 0.99 15412 40222
Expression level of Genes
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miRNAs possibly regulated by vista23900[chr17:8090795-8091158]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results