EnhancerDB
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  3. vista2391[chr1:90185639-90185820]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2391[chr1:90185639-90185820]
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Tissue distribution of vista2391
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Transcription factor that possibly regulate vista2391[chr1:90185639-90185820]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90185629 90185650 ZNF263 JASPAR yes 30616550
chr1 90185629 90185650 ZNF263 JASPAR yes 118325506
chr1 90185639 90185653 GATA2 JASPAR yes 30616551
chr1 90185639 90185653 GATA2 JASPAR yes 118325507
chr1 90185641 90185649 GATA3 JASPAR yes 30616552
chr1 90185641 90185649 GATA5 JASPAR yes 30616553
chr1 90185641 90185649 GATA3 JASPAR yes 118325508
chr1 90185641 90185649 GATA5 JASPAR yes 118325509
chr1 90185645 90185650 ETS2 TRANSFAC yes 30616554
chr1 90185645 90185650 ETS2 TRANSFAC yes 118325510
chr1 90185645 90185653 EHF JASPAR yes 30616555
chr1 90185645 90185653 EHF JASPAR yes 118325511
chr1 90185658 90185675 ZNF410 JASPAR yes 30616556
chr1 90185658 90185675 ZNF410 JASPAR yes 118325512
chr1 90185681 90185689 MGA JASPAR yes 30616557
chr1 90185681 90185689 TBX15 JASPAR yes 30616558
chr1 90185681 90185689 TBX1 JASPAR yes 30616559
chr1 90185681 90185689 TBX4 JASPAR yes 30616560
chr1 90185681 90185689 TBX5 JASPAR yes 30616561
chr1 90185681 90185689 MGA JASPAR yes 118325513
chr1 90185681 90185689 TBX15 JASPAR yes 118325514
chr1 90185681 90185689 TBX1 JASPAR yes 118325515
chr1 90185681 90185689 TBX4 JASPAR yes 118325516
chr1 90185681 90185689 TBX5 JASPAR yes 118325517
chr1 90185693 90185701 HOXA5 JASPAR yes 30616562
chr1 90185693 90185701 HOXA5 JASPAR yes 118325518
chr1 90185707 90185718 USF1 JASPAR yes 30616563
chr1 90185707 90185718 USF1 JASPAR yes 118325519
chr1 90185708 90185718 TFEB JASPAR yes 30616564
chr1 90185708 90185718 TFEC JASPAR yes 30616565
chr1 90185708 90185718 TFEB JASPAR yes 118325520
chr1 90185708 90185718 TFEC JASPAR yes 118325521
chr1 90185708 90185719 USF2 JASPAR yes 30616566
chr1 90185708 90185719 USF2 JASPAR yes 118325522
chr1 90185719 90185730 EBF1 JASPAR yes 30616567
chr1 90185719 90185730 EBF1 JASPAR yes 118325523
chr1 90185726 90185739 HSF2 JASPAR yes 30616568
chr1 90185726 90185739 HSF2 JASPAR yes 118325524
chr1 90185730 90185741 STAT3 JASPAR yes 30616569
chr1 90185730 90185741 STAT3 JASPAR yes 118325525
chr1 90185765 90185778 ZBTB18 JASPAR yes 30616570
chr1 90185765 90185778 ZBTB18 JASPAR yes 118325526
chr1 90185766 90185776 NEUROG2 JASPAR yes 30616571
chr1 90185766 90185776 NEUROG2 JASPAR yes 118325527
chr1 90185776 90185781 H4TF1 TRANSFAC yes 30616572
chr1 90185776 90185781 H4TF1 TRANSFAC yes 118325528
SNP sites on vista2391[chr1:90185639-90185820]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90185679 rs554671544 T G no 470739
Genes possibly regulated by vista2391[chr1:90185639-90185820]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90098631 90235462 + LRRC8C ENSG00000171488.10 90098631 0.84 0.99 882 12992
chr1 90098699 90398809 + RP11-302M6.4 ENSG00000271949.1 90098699 1.0 1.0 883 13060
Expression level of Genes
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miRNAs possibly regulated by vista2391[chr1:90185639-90185820]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results