EnhancerDB
  1. Home
  2. Enhancers
  3. vista23920[chr17:8760227-8760351]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23920[chr17:8760227-8760351]
Back to top
Tissue distribution of vista23920
Back to top
Transcription factor that possibly regulate vista23920[chr17:8760227-8760351]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 8760151 8760413 RUNX3 UCSC Txn Factor no Conserved 108237768
chr17 8760219 8760231 TAL1 JASPAR yes 21194952
chr17 8760219 8760231 TAL1 JASPAR yes 53003302
chr17 8760220 8760233 ZBTB18 JASPAR yes 21194953
chr17 8760220 8760233 ZBTB18 JASPAR yes 53003303
chr17 8760227 8760241 TLX1 JASPAR yes 21194954
chr17 8760227 8760241 TLX1 JASPAR yes 53003304
chr17 8760255 8760270 RUNX2 JASPAR yes 21194955
chr17 8760255 8760270 RUNX2 JASPAR yes 53003305
chr17 8760269 8760272 MYB TRANSFAC yes 21194956
chr17 8760269 8760272 MYB TRANSFAC yes 53003306
chr17 8760273 8760288 HNF4A JASPAR yes 21194957
chr17 8760273 8760288 HNF4A JASPAR yes 53003307
chr17 8760274 8760277 MYB TRANSFAC yes 21194958
chr17 8760274 8760277 MYB TRANSFAC yes 53003308
chr17 8760274 8760288 NR2F1 JASPAR yes 21194959
chr17 8760274 8760288 RXRG JASPAR yes 21194960
chr17 8760274 8760288 NR2F1 JASPAR yes 53003309
chr17 8760274 8760288 RXRG JASPAR yes 53003310
chr17 8760274 8760289 HNF4G JASPAR yes 21194961
chr17 8760274 8760289 HNF4G JASPAR yes 53003311
chr17 8760302 8760312 SP1 JASPAR yes 21194962
chr17 8760302 8760312 SP1 JASPAR yes 53003312
chr17 8760302 8760323 ZNF263 JASPAR yes 21194963
chr17 8760302 8760323 ZNF263 JASPAR yes 53003313
chr17 8760316 8760337 ZNF263 JASPAR yes 21194964
chr17 8760316 8760337 ZNF263 JASPAR yes 53003314
chr17 8760317 8760323 MZF1 JASPAR yes 21194965
chr17 8760317 8760323 MZF1 JASPAR yes 53003315
chr17 8760320 8760333 ZBTB18 JASPAR yes 21194966
chr17 8760320 8760333 ZBTB18 JASPAR yes 53003316
chr17 8760321 8760331 MSC JASPAR yes 21194967
chr17 8760321 8760331 MSC JASPAR yes 53003317
chr17 8760330 8760340 MZF1 JASPAR yes 21194968
chr17 8760330 8760340 MZF1 JASPAR yes 53003318
SNP sites on vista23920[chr17:8760227-8760351]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 8760310 rs190831545 C T
RUNX3 SP1 ZNF263
4737987
chr17 8760339 rs12951083 C T
MZF1 RUNX3
4737988
Genes possibly regulated by vista23920[chr17:8760227-8760351]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 8656424 8661877 - SPDYE4 ENSG00000183318.7 8661877 0.88 0.98 15425 1650
chr17 8700436 8702667 - MFSD6L ENSG00000185156.4 8702667 0.89 0.0 15426 42440
chr17 8706041 8770994 - PIK3R6 ENSG00000174083.13 8770994 0.98 1.0 15427 89357
Expression level of Genes
Back to top
miRNAs possibly regulated by vista23920[chr17:8760227-8760351]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results