EnhancerDB
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  3. vista23939[chr17:8849870-8850019]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23939[chr17:8849870-8850019]
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Tissue distribution of vista23939
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Transcription factor that possibly regulate vista23939[chr17:8849870-8850019]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 8849870 8849877 FOXD2 JASPAR yes 21196471
chr17 8849870 8849877 FOXI1 JASPAR yes 21196472
chr17 8849870 8849877 FOXL1 JASPAR yes 21196473
chr17 8849870 8849877 FOXO4 JASPAR yes 21196474
chr17 8849870 8849877 FOXO6 JASPAR yes 21196475
chr17 8849870 8849877 FOXP3 JASPAR yes 21196476
chr17 8849870 8849881 FOXA1 JASPAR yes 21196477
chr17 8849878 8849888 HOXB13 JASPAR yes 21196478
chr17 8849918 8849924 TCF4 TRANSFAC yes 21196479
chr17 8849940 8849946 TCF4 TRANSFAC yes 21196480
chr17 8849942 8849956 JUN JASPAR yes 21196481
chr17 8849944 8849955 BATF JASPAR yes 21196482
chr17 8849945 8849956 FOSL2 JASPAR yes 21196483
chr17 8849945 8849956 JUNB JASPAR yes 21196484
chr17 8849946 8849957 FOS JASPAR yes 21196485
chr17 8849946 8849957 FOSL1 JASPAR yes 21196486
chr17 8849946 8849957 JUND JASPAR yes 21196487
chr17 8849947 8849956 JDP2 JASPAR yes 21196488
chr17 8849967 8849971 YY1 TRANSFAC yes 21196489
chr17 8849985 8849996 USF2 JASPAR yes 21196490
chr17 8849991 8850002 GCM1 JASPAR yes 21196491
chr17 8849995 8850007 HES5 JASPAR yes 21196492
chr17 8849996 8850007 USF2 JASPAR yes 21196493
chr17 8849997 8850007 MAX JASPAR yes 21196494
chr17 8849998 8850016 TP53 JASPAR yes 21196495
chr17 8850004 8850010 SP1 TRANSFAC yes 21196496
chr17 8850004 8850015 YY2 JASPAR yes 21196497
chr17 8850005 8850017 YY1 JASPAR yes 21196498
SNP sites on vista23939[chr17:8849870-8850019]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 8849880 rs117049841 A G
FOXA1 HOXB13
4738620
chr17 8849883 rs138073141 T C
HOXB13
4738621
chr17 8849907 rs7209733 G A,T no 4738622
chr17 8849927 rs543269597 C T no 4738623
chr17 8849963 rs73253101 C A no 4738624
chr17 8850009 rs149537008 G A
SP1 TP53 YY1 YY2
4738625
Genes possibly regulated by vista23939[chr17:8849870-8850019]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 8706041 8770994 - PIK3R6 ENSG00000174083.13 8770994 0.98 1.0 15427 21124
chr17 8782233 8869029 - PIK3R5 ENSG00000141506.9 8869029 0.87 1.0 15428 80990
chr17 8924859 9147317 + NTN1 ENSG00000065320.4 8924859 0.95 1.0 15429 25160
Expression level of Genes
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miRNAs possibly regulated by vista23939[chr17:8849870-8850019]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results