EnhancerDB
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  3. vista2394[chr1:90190139-90190909]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2394[chr1:90190139-90190909]
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Tissue distribution of vista2394
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Transcription factor that possibly regulate vista2394[chr1:90190139-90190909]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90190251 90190504 RUNX3 UCSC Txn Factor no Conserved 107813716
chr1 90190691 90190955 CEBPB UCSC Txn Factor no Conserved 107813720
chr1 90190123 90190142 CTCF JASPAR yes 30617183
chr1 90190123 90190142 CTCF JASPAR yes 118325618
chr1 90190154 90190166 MEF2B JASPAR yes 30617184
chr1 90190154 90190166 MEF2B JASPAR yes 118325619
chr1 90190175 90190181 YY1 JASPAR yes 30617185
chr1 90190175 90190181 YY1 JASPAR yes 118325620
chr1 90190180 90190184 YY1 TRANSFAC yes 30617186
chr1 90190180 90190184 YY1 TRANSFAC yes 118325621
chr1 90190180 90190194 IRF7 JASPAR yes 30617187
chr1 90190180 90190194 IRF7 JASPAR yes 118325622
chr1 90190185 90190189 YY1 TRANSFAC yes 30617188
chr1 90190185 90190189 YY1 TRANSFAC yes 118325623
chr1 90190200 90190214 ONECUT2 JASPAR yes 30617189
chr1 90190200 90190214 ONECUT2 JASPAR yes 118325624
chr1 90190207 90190211 YY1 TRANSFAC yes 30617190
chr1 90190207 90190211 YY1 TRANSFAC yes 118325625
chr1 90190214 90190231 BCL6B JASPAR yes 30617191
chr1 90190214 90190231 BCL6B JASPAR yes 118325626
chr1 90190217 90190224 MEIS1 JASPAR yes 30617192
chr1 90190217 90190224 MEIS1 JASPAR yes 118325627
chr1 90190217 90190225 MEIS2 JASPAR yes 30617193
chr1 90190217 90190225 MEIS3 JASPAR yes 30617194
chr1 90190217 90190225 MEIS2 JASPAR yes 118325628
chr1 90190217 90190225 MEIS3 JASPAR yes 118325629
chr1 90190224 90190229 H4TF1 TRANSFAC yes 30617195
chr1 90190224 90190229 H4TF1 TRANSFAC yes 118325630
chr1 90190247 90190258 RUNX1 JASPAR yes 30617196
chr1 90190247 90190258 RUNX1 JASPAR yes 118325631
chr1 90190251 90190263 MYBL1 JASPAR yes 30617197
chr1 90190251 90190263 MYBL1 JASPAR yes 118325632
chr1 90190256 90190259 MYB TRANSFAC yes 30617198
chr1 90190256 90190259 MYB TRANSFAC yes 118325633
chr1 90190288 90190296 FEV JASPAR yes 30617199
chr1 90190288 90190296 FEV JASPAR yes 118325634
chr1 90190319 90190327 TBX5 JASPAR yes 30617200
chr1 90190319 90190327 TBX5 JASPAR yes 118325635
chr1 90190351 90190364 ELF1 JASPAR yes 30617201
chr1 90190351 90190364 ELF1 JASPAR yes 118325636
chr1 90190353 90190364 ETV2 JASPAR yes 30617202
chr1 90190353 90190364 ETV2 JASPAR yes 118325637
chr1 90190354 90190361 SPIB JASPAR yes 30617203
chr1 90190354 90190361 SPIB JASPAR yes 118325638
chr1 90190354 90190364 ETV6 JASPAR yes 30617204
chr1 90190354 90190364 ETV6 JASPAR yes 118325639
chr1 90190355 90190363 FEV JASPAR yes 30617205
chr1 90190355 90190363 FEV JASPAR yes 118325640
chr1 90190360 90190371 NFE2 JASPAR yes 30617206
chr1 90190360 90190371 NFE2 JASPAR yes 118325641
chr1 90190361 90190370 JDP2 JASPAR yes 30617207
chr1 90190361 90190370 JDP2 JASPAR yes 118325642
chr1 90190371 90190386 RUNX2 JASPAR yes 30617208
chr1 90190371 90190386 RUNX2 JASPAR yes 118325643
chr1 90190403 90190408 SP1 TRANSFAC yes 30617209
chr1 90190403 90190408 SP1 TRANSFAC yes 118325644
chr1 90190406 90190411 SP1 TRANSFAC yes 30617210
chr1 90190406 90190411 SP1 TRANSFAC yes 118325645
chr1 90190424 90190445 IRF1 JASPAR yes 30617211
chr1 90190424 90190445 IRF1 JASPAR yes 118325646
chr1 90190428 90190440 YY1 JASPAR yes 30617212
chr1 90190428 90190440 YY1 JASPAR yes 118325647
chr1 90190430 90190445 MEF2C JASPAR yes 30617213
chr1 90190430 90190445 MEF2C JASPAR yes 118325648
chr1 90190433 90190437 YY1 TRANSFAC yes 30617214
chr1 90190433 90190437 YY1 TRANSFAC yes 118325649
chr1 90190439 90190444 GATA2 JASPAR yes 30617215
chr1 90190439 90190444 GATA2 JASPAR yes 118325650
chr1 90190469 90190480 FLI1 JASPAR yes 30617216
chr1 90190469 90190480 FLI1 JASPAR yes 118325651
chr1 90190482 90190488 MZF1 JASPAR yes 30617217
chr1 90190482 90190488 MZF1 JASPAR yes 118325652
chr1 90190540 90190549 THAP1 JASPAR yes 30617218
chr1 90190540 90190549 THAP1 JASPAR yes 118325653
chr1 90190543 90190547 LFA1 TRANSFAC yes 30617219
chr1 90190543 90190547 LFA1 TRANSFAC yes 118325654
chr1 90190565 90190571 SOX10 JASPAR yes 30617220
chr1 90190565 90190571 SOX10 JASPAR yes 118325655
chr1 90190582 90190587 MYC TRANSFAC yes 30617221
chr1 90190582 90190587 MYC TRANSFAC yes 118325656
chr1 90190586 90190592 ESR1 TRANSFAC yes 30617222
chr1 90190586 90190592 ESR1 TRANSFAC yes 118325657
chr1 90190588 90190592 ESR1 TRANSFAC yes 30617223
chr1 90190588 90190592 ESR1 TRANSFAC yes 118325658
chr1 90190588 90190603 JUND JASPAR yes 30617224
chr1 90190588 90190603 JUND JASPAR yes 118325659
chr1 90190589 90190599 SREBF1 JASPAR yes 30617225
chr1 90190589 90190599 SREBF2 JASPAR yes 30617226
chr1 90190589 90190599 SREBF1 JASPAR yes 118325660
chr1 90190589 90190599 SREBF2 JASPAR yes 118325661
chr1 90190611 90190617 PEA3 TRANSFAC yes 30617227
chr1 90190611 90190617 PEA3 TRANSFAC yes 118325662
chr1 90190618 90190622 YY1 TRANSFAC yes 30617228
chr1 90190618 90190622 YY1 TRANSFAC yes 118325663
chr1 90190627 90190637 NFATC3 JASPAR yes 30617229
chr1 90190627 90190637 NFATC3 JASPAR yes 118325664
chr1 90190629 90190636 NFATC2 JASPAR yes 30617230
chr1 90190629 90190636 NFATC2 JASPAR yes 118325665
chr1 90190636 90190653 BCL6B JASPAR yes 30617231
chr1 90190636 90190653 BCL6B JASPAR yes 118325666
chr1 90190637 90190652 STAT1 JASPAR yes 30617232
chr1 90190637 90190652 STAT1 JASPAR yes 118325667
chr1 90190639 90190650 STAT1 JASPAR yes 30617233
chr1 90190639 90190650 STAT3 JASPAR yes 30617234
chr1 90190639 90190650 STAT1 JASPAR yes 118325668
chr1 90190639 90190650 STAT3 JASPAR yes 118325669
chr1 90190648 90190664 POU4F2 JASPAR yes 30617235
chr1 90190648 90190664 POU4F3 JASPAR yes 30617236
chr1 90190648 90190664 POU4F2 JASPAR yes 118325670
chr1 90190648 90190664 POU4F3 JASPAR yes 118325671
chr1 90190651 90190662 FOS JASPAR yes 30617237
chr1 90190651 90190662 NFE2 JASPAR yes 30617238
chr1 90190651 90190662 FOS JASPAR yes 118325672
chr1 90190651 90190662 NFE2 JASPAR yes 118325673
chr1 90190652 90190661 JDP2 JASPAR yes 30617239
chr1 90190652 90190661 JDP2 JASPAR yes 118325674
chr1 90190652 90190664 HNF1B JASPAR yes 30617240
chr1 90190652 90190664 HNF1B JASPAR yes 118325675
chr1 90190674 90190685 NFKB1 JASPAR yes 30617241
chr1 90190674 90190685 NFKB1 JASPAR yes 118325676
chr1 90190675 90190685 NFKB1 JASPAR yes 30617242
chr1 90190675 90190685 REL JASPAR yes 30617243
chr1 90190675 90190685 NFKB1 JASPAR yes 118325677
chr1 90190675 90190685 REL JASPAR yes 118325678
chr1 90190712 90190722 EMX1 JASPAR yes 30617244
chr1 90190712 90190722 HOXB3 JASPAR yes 30617245
chr1 90190712 90190722 EMX1 JASPAR yes 118325679
chr1 90190712 90190722 HOXB3 JASPAR yes 118325680
chr1 90190723 90190743 ESR1 JASPAR yes 30617246
chr1 90190723 90190743 ESR1 JASPAR yes 118325681
chr1 90190727 90190745 ESR2 JASPAR yes 30617247
chr1 90190727 90190745 ESR2 JASPAR yes 118325682
chr1 90190728 90190743 ESR2 JASPAR yes 30617248
chr1 90190728 90190743 ESR2 JASPAR yes 118325683
chr1 90190728 90190748 ESR1 JASPAR yes 30617249
chr1 90190728 90190748 ESR1 JASPAR yes 118325684
chr1 90190729 90190733 LFA1 TRANSFAC yes 30617250
chr1 90190729 90190733 LFA1 TRANSFAC yes 118325685
chr1 90190742 90190746 TEAD2 TRANSFAC yes 30617251
chr1 90190742 90190746 TEAD2 TRANSFAC yes 118325686
chr1 90190793 90190804 E2F6 JASPAR yes 30617252
chr1 90190793 90190804 E2F6 JASPAR yes 118325687
chr1 90190836 90190849 ATF4 JASPAR yes 30617253
chr1 90190836 90190849 ATF4 JASPAR yes 118325688
chr1 90190839 90190845 ATF1 TRANSFAC yes 30617254
chr1 90190839 90190845 ATF1 TRANSFAC yes 118325689
chr1 90190845 90190865 TP63 JASPAR yes 30617255
chr1 90190845 90190865 TP63 JASPAR yes 118325690
chr1 90190846 90190858 HNF1B JASPAR yes 30617256
chr1 90190846 90190858 HNF1B JASPAR yes 118325691
chr1 90190846 90190864 TP63 JASPAR yes 30617257
chr1 90190846 90190864 TP63 JASPAR yes 118325692
chr1 90190848 90190863 TP53 JASPAR yes 30617258
chr1 90190848 90190863 TP53 JASPAR yes 118325693
chr1 90190857 90190868 HOXC13 JASPAR yes 30617259
chr1 90190857 90190868 HOXC13 JASPAR yes 118325694
chr1 90190866 90190872 ZNF354C JASPAR yes 30617260
chr1 90190866 90190872 ZNF354C JASPAR yes 118325695
chr1 90190877 90190881 YY1 TRANSFAC yes 30617261
chr1 90190877 90190881 YY1 TRANSFAC yes 118325696
SNP sites on vista2394[chr1:90190139-90190909]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90190152 rs149625083 C G,T no 470788
chr1 90190263 rs533803737 TCTTA T
MYBL1 RUNX3
470789
chr1 90190270 rs573876448 TCTC T
RUNX3
470790
chr1 90190309 rs528145538 C T
RUNX3
470791
chr1 90190590 rs536414978 GTCACATCATTCTTCTAGA G
ESR1 JUND SREBF1 SREBF2
470792
Genes possibly regulated by vista2394[chr1:90190139-90190909]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90098631 90235462 + LRRC8C ENSG00000171488.10 90098631 0.84 0.99 882 8492
chr1 90098699 90398809 + RP11-302M6.4 ENSG00000271949.1 90098699 1.0 1.0 883 8560
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 4336
Expression level of Genes
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miRNAs possibly regulated by vista2394[chr1:90190139-90190909]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results