EnhancerDB
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  3. vista23940[chr17:8850448-8850862]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23940[chr17:8850448-8850862]
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Tissue distribution of vista23940
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Transcription factor that possibly regulate vista23940[chr17:8850448-8850862]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 8850468 8850482 STAT1 JASPAR yes 21196499
chr17 8850481 8850495 NR2F1 JASPAR yes 21196500
chr17 8850516 8850521 GATA2 JASPAR yes 21196501
chr17 8850532 8850542 EVX1 JASPAR yes 21196502
chr17 8850532 8850542 EVX2 JASPAR yes 21196503
chr17 8850532 8850542 LHX6 JASPAR yes 21196504
chr17 8850533 8850546 DUXA JASPAR yes 21196505
chr17 8850534 8850545 DUX4 JASPAR yes 21196506
chr17 8850577 8850581 ESR1 TRANSFAC yes 21196507
chr17 8850593 8850604 ESRRB JASPAR yes 21196508
chr17 8850595 8850603 NR4A2 JASPAR yes 21196509
chr17 8850597 8850601 ESR1 TRANSFAC yes 21196510
chr17 8850623 8850627 NFE TRANSFAC yes 21196511
chr17 8850628 8850632 NFE TRANSFAC yes 21196512
chr17 8850628 8850633 GATA1 TRANSFAC yes 21196513
chr17 8850628 8850634 GATA3 JASPAR yes 21196514
chr17 8850655 8850664 SOX9 JASPAR yes 21196515
chr17 8850655 8850664 SOX9 JASPAR yes 53008756
chr17 8850655 8850670 PRDM1 JASPAR yes 21196516
chr17 8850655 8850670 PRDM1 JASPAR yes 53008757
chr17 8850655 8850673 IRF2 JASPAR yes 21196517
chr17 8850655 8850673 IRF2 JASPAR yes 53008758
chr17 8850660 8850666 TCF4 TRANSFAC yes 21196518
chr17 8850660 8850666 TCF4 TRANSFAC yes 53008759
chr17 8850667 8850673 SOX10 JASPAR yes 21196519
chr17 8850667 8850673 SOX10 JASPAR yes 53008760
chr17 8850677 8850692 PRDM1 JASPAR yes 21196520
chr17 8850677 8850692 PRDM1 JASPAR yes 53008761
chr17 8850685 8850692 SPIB JASPAR yes 21196521
chr17 8850685 8850692 SPIB JASPAR yes 53008762
chr17 8850685 8850706 ZNF263 JASPAR yes 21196522
chr17 8850685 8850706 ZNF263 JASPAR yes 53008763
chr17 8850693 8850713 PPARG JASPAR yes 21196523
chr17 8850693 8850713 PPARG JASPAR yes 53008764
chr17 8850694 8850699 TFAP2A TRANSFAC yes 21196524
chr17 8850694 8850699 TFAP2A TRANSFAC yes 53008765
chr17 8850694 8850700 MZF1 JASPAR yes 21196525
chr17 8850694 8850700 MZF1 JASPAR yes 53008766
chr17 8850730 8850743 ELF3 JASPAR yes 21196526
chr17 8850730 8850743 ELF3 JASPAR yes 53008767
chr17 8850734 8850740 ETS1 JASPAR yes 21196527
chr17 8850734 8850740 SPI1 JASPAR yes 21196528
chr17 8850734 8850740 ETS1 JASPAR yes 53008768
chr17 8850734 8850740 SPI1 JASPAR yes 53008769
chr17 8850738 8850753 HSF1 JASPAR yes 21196529
chr17 8850738 8850753 HSF1 JASPAR yes 53008770
chr17 8850739 8850752 HSF1 JASPAR yes 21196530
chr17 8850739 8850752 HSF2 JASPAR yes 21196531
chr17 8850739 8850752 HSF4 JASPAR yes 21196532
chr17 8850739 8850752 HSF1 JASPAR yes 53008771
chr17 8850739 8850752 HSF2 JASPAR yes 53008772
chr17 8850739 8850752 HSF4 JASPAR yes 53008773
chr17 8850747 8850755 FOXL1 JASPAR yes 21196533
chr17 8850747 8850755 FOXL1 JASPAR yes 53008774
chr17 8850778 8850784 TCF4 TRANSFAC yes 21196534
chr17 8850778 8850784 TCF4 TRANSFAC yes 53008775
chr17 8850784 8850805 REST JASPAR yes 21196535
chr17 8850784 8850805 REST JASPAR yes 53008776
chr17 8850785 8850804 REST JASPAR yes 21196536
chr17 8850785 8850804 REST JASPAR yes 53008777
chr17 8850788 8850792 NFE TRANSFAC yes 21196537
chr17 8850788 8850792 NFE TRANSFAC yes 53008778
chr17 8850789 8850794 GATA2 JASPAR yes 21196538
chr17 8850789 8850794 GATA2 JASPAR yes 53008779
chr17 8850796 8850806 SP1 JASPAR yes 21196539
chr17 8850796 8850806 SP1 JASPAR yes 53008780
chr17 8850806 8850815 SRY JASPAR yes 21196540
chr17 8850806 8850815 SRY JASPAR yes 53008781
chr17 8850810 8850816 ETS1 JASPAR yes 21196541
chr17 8850810 8850816 ETS1 JASPAR yes 53008782
chr17 8850819 8850824 GATA1 TRANSFAC yes 21196542
chr17 8850819 8850824 GATA1 TRANSFAC yes 53008783
chr17 8850828 8850838 HOXA13 JASPAR yes 21196543
chr17 8850828 8850838 HOXA13 JASPAR yes 53008784
SNP sites on vista23940[chr17:8850448-8850862]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 8850460 rs7210598 G A no 4738632
chr17 8850473 rs139268999 A AATG
STAT1
4738633
chr17 8850516 rs376535258 T C
GATA2
4738634
chr17 8850550 rs111765364 C T no 4738635
chr17 8850696 rs141993090 G A
MZF1 PPARG TFAP2A ZNF263
4738636
chr17 8850740 rs78319348 G T
ELF3 ETS1 HSF1 HSF2 HSF4 SPI1
4738637
chr17 8850760 rs74724555 G T no 4738638
chr17 8850777 rs139641902 T G no 4738639
chr17 8850820 rs188786208 G A
GATA1
4738640
chr17 8850835 rs147810079 AAAC A
HOXA13
4738641
Genes possibly regulated by vista23940[chr17:8850448-8850862]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 8706041 8770994 - PIK3R6 ENSG00000174083.13 8770994 0.98 1.0 15427 20546
chr17 8782233 8869029 - PIK3R5 ENSG00000141506.9 8869029 0.87 1.0 15428 81833
chr17 8924859 9147317 + NTN1 ENSG00000065320.4 8924859 0.95 1.0 15429 26003
Expression level of Genes
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miRNAs possibly regulated by vista23940[chr17:8850448-8850862]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results