EnhancerDB
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  3. vista2396[chr1:90204490-90205244]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2396[chr1:90204490-90205244]
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Tissue distribution of vista2396
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Transcription factor that possibly regulate vista2396[chr1:90204490-90205244]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90204485 90204499 TLX1 JASPAR yes 30618005
chr1 90204485 90204499 TLX1 JASPAR yes 118325726
chr1 90204494 90204500 YY1 JASPAR yes 30618006
chr1 90204494 90204500 YY1 JASPAR yes 118325727
chr1 90204530 90204539 HIC2 JASPAR yes 30618007
chr1 90204530 90204539 HIC2 JASPAR yes 118325728
chr1 90204533 90204537 LFA1 TRANSFAC yes 30618008
chr1 90204533 90204537 LFA1 TRANSFAC yes 118325729
chr1 90204536 90204541 MYC TRANSFAC yes 30618009
chr1 90204536 90204541 MYC TRANSFAC yes 118325730
chr1 90204561 90204572 DMRT3 JASPAR yes 30618010
chr1 90204561 90204572 DMRT3 JASPAR yes 118325731
chr1 90204565 90204581 SRF JASPAR yes 30618011
chr1 90204565 90204581 SRF JASPAR yes 118325732
chr1 90204583 90204596 JUN JASPAR yes 30618012
chr1 90204583 90204596 JUN JASPAR yes 118325733
chr1 90204585 90204600 JUND JASPAR yes 30618013
chr1 90204585 90204600 JUND JASPAR yes 118325734
chr1 90204604 90204624 RREB1 JASPAR yes 30618014
chr1 90204604 90204624 RREB1 JASPAR yes 118325735
chr1 90204612 90204615 MYB TRANSFAC yes 30618015
chr1 90204612 90204615 MYB TRANSFAC yes 118325736
chr1 90204619 90204632 ZBTB18 JASPAR yes 30618016
chr1 90204619 90204632 ZBTB18 JASPAR yes 118325737
chr1 90204621 90204631 ID4 JASPAR yes 30618017
chr1 90204621 90204631 TCF3 JASPAR yes 30618018
chr1 90204621 90204631 TCF4 JASPAR yes 30618019
chr1 90204621 90204631 ID4 JASPAR yes 118325738
chr1 90204621 90204631 TCF3 JASPAR yes 118325739
chr1 90204621 90204631 TCF4 JASPAR yes 118325740
chr1 90204623 90204632 ZEB1 JASPAR yes 30618020
chr1 90204623 90204632 ZEB1 JASPAR yes 118325741
chr1 90204623 90204633 TBX21 JASPAR yes 30618021
chr1 90204623 90204633 TBX21 JASPAR yes 118325742
chr1 90204623 90204636 EOMES JASPAR yes 30618022
chr1 90204623 90204636 EOMES JASPAR yes 118325743
chr1 90204624 90204632 MGA JASPAR yes 30618023
chr1 90204624 90204632 TBX15 JASPAR yes 30618024
chr1 90204624 90204632 TBX1 JASPAR yes 30618025
chr1 90204624 90204632 TBX4 JASPAR yes 30618026
chr1 90204624 90204632 TBX5 JASPAR yes 30618027
chr1 90204624 90204632 MGA JASPAR yes 118325744
chr1 90204624 90204632 TBX15 JASPAR yes 118325745
chr1 90204624 90204632 TBX1 JASPAR yes 118325746
chr1 90204624 90204632 TBX4 JASPAR yes 118325747
chr1 90204624 90204632 TBX5 JASPAR yes 118325748
chr1 90204624 90204634 TBR1 JASPAR yes 30618028
chr1 90204624 90204634 TBR1 JASPAR yes 118325749
chr1 90204624 90204639 JUND JASPAR yes 30618029
chr1 90204624 90204639 JUND JASPAR yes 118325750
chr1 90204626 90204640 ATF7 JASPAR yes 30618030
chr1 90204626 90204640 ATF7 JASPAR yes 118325751
chr1 90204626 90204644 RARA JASPAR yes 30618031
chr1 90204626 90204644 RARA JASPAR yes 118325752
chr1 90204627 90204639 JDP2 JASPAR yes 30618032
chr1 90204627 90204639 JDP2 JASPAR yes 118325753
chr1 90204627 90204642 JUND JASPAR yes 30618033
chr1 90204627 90204642 JUND JASPAR yes 118325754
chr1 90204628 90204636 NR4A2 JASPAR yes 30618034
chr1 90204628 90204636 NR4A2 JASPAR yes 118325755
chr1 90204628 90204641 JUN JASPAR yes 30618035
chr1 90204628 90204641 JUN JASPAR yes 118325756
chr1 90204629 90204637 CREB1 JASPAR yes 30618036
chr1 90204629 90204637 CREB1 JASPAR yes 118325757
chr1 90204641 90204648 JUN TRANSFAC yes 30618037
chr1 90204641 90204648 JUN TRANSFAC yes 118325758
chr1 90204654 90204659 ETS2 TRANSFAC yes 30618038
chr1 90204654 90204659 ETS2 TRANSFAC yes 118325759
chr1 90204658 90204669 DUX4 JASPAR yes 30618039
chr1 90204658 90204669 DUX4 JASPAR yes 118325760
chr1 90204711 90204721 MZF1 JASPAR yes 30618040
chr1 90204711 90204721 MZF1 JASPAR yes 118325761
chr1 90204724 90204744 TP63 JASPAR yes 30618041
chr1 90204724 90204744 TP63 JASPAR yes 118325762
chr1 90204726 90204741 TP53 JASPAR yes 30618042
chr1 90204726 90204741 TP53 JASPAR yes 118325763
chr1 90204735 90204748 JUN JASPAR yes 30618043
chr1 90204735 90204748 JUN JASPAR yes 118325764
chr1 90204737 90204749 JDP2 JASPAR yes 30618044
chr1 90204737 90204749 JDP2 JASPAR yes 118325765
chr1 90204737 90204752 JUND JASPAR yes 30618045
chr1 90204737 90204752 JUND JASPAR yes 118325766
chr1 90204744 90204759 NR2C2 JASPAR yes 30618046
chr1 90204744 90204759 NR2C2 JASPAR yes 118325767
chr1 90204745 90204755 ZNF740 JASPAR yes 30618047
chr1 90204745 90204755 ZNF740 JASPAR yes 118325768
chr1 90204745 90204759 GLIS2 JASPAR yes 30618048
chr1 90204745 90204759 GLIS3 JASPAR yes 30618049
chr1 90204745 90204759 GLIS2 JASPAR yes 118325769
chr1 90204745 90204759 GLIS3 JASPAR yes 118325770
chr1 90204747 90204767 RREB1 JASPAR yes 30618050
chr1 90204747 90204767 RREB1 JASPAR yes 118325771
chr1 90204747 90204768 ZNF263 JASPAR yes 30618051
chr1 90204747 90204768 ZNF263 JASPAR yes 118325772
chr1 90204749 90204759 SP1 JASPAR yes 30618052
chr1 90204749 90204759 SP1 JASPAR yes 118325773
chr1 90204751 90204772 ZNF263 JASPAR yes 30618053
chr1 90204751 90204772 ZNF263 JASPAR yes 118325774
chr1 90204758 90204762 H1TF2 TRANSFAC yes 30618054
chr1 90204758 90204762 NFE TRANSFAC yes 30618055
chr1 90204758 90204762 SRF TRANSFAC yes 30618056
chr1 90204758 90204762 H1TF2 TRANSFAC yes 118325775
chr1 90204758 90204762 NFE TRANSFAC yes 118325776
chr1 90204758 90204762 SRF TRANSFAC yes 118325777
chr1 90204784 90204805 ZNF263 JASPAR yes 30618057
chr1 90204784 90204805 ZNF263 JASPAR yes 118325778
chr1 90204789 90204799 SP1 JASPAR yes 30618058
chr1 90204789 90204799 SP1 JASPAR yes 118325779
chr1 90204792 90204802 MZF1 JASPAR yes 30618059
chr1 90204792 90204802 MZF1 JASPAR yes 118325780
chr1 90204794 90204804 SP1 JASPAR yes 30618060
chr1 90204794 90204804 SP1 JASPAR yes 118325781
chr1 90204795 90204801 SP1 TRANSFAC yes 30618061
chr1 90204795 90204801 SP1 TRANSFAC yes 118325782
chr1 90204795 90204805 SP1 JASPAR yes 30618062
chr1 90204795 90204805 SP1 JASPAR yes 118325783
chr1 90204796 90204806 ZNF740 JASPAR yes 30618063
chr1 90204796 90204806 ZNF740 JASPAR yes 118325784
chr1 90204799 90204805 MZF1 JASPAR yes 30618064
chr1 90204799 90204805 MZF1 JASPAR yes 118325785
chr1 90204815 90204825 MZF1 JASPAR yes 30618065
chr1 90204815 90204825 MZF1 JASPAR yes 118325786
chr1 90204816 90204822 MZF1 JASPAR yes 30618066
chr1 90204816 90204822 MZF1 JASPAR yes 118325787
chr1 90204818 90204828 SP1 JASPAR yes 30618067
chr1 90204818 90204828 SP1 JASPAR yes 118325788
chr1 90204828 90204847 CTCF JASPAR yes 30618068
chr1 90204828 90204847 CTCF JASPAR yes 118325789
chr1 90204846 90204867 ZNF263 JASPAR yes 30618069
chr1 90204846 90204867 ZNF263 JASPAR yes 118325790
chr1 90204860 90204871 STAT1 JASPAR yes 30618070
chr1 90204860 90204871 STAT3 JASPAR yes 30618071
chr1 90204860 90204871 STAT1 JASPAR yes 118325791
chr1 90204860 90204871 STAT3 JASPAR yes 118325792
chr1 90204876 90204880 NFE TRANSFAC yes 30618072
chr1 90204876 90204880 NFE TRANSFAC yes 118325793
chr1 90204907 90204918 FLI1 JASPAR yes 30618073
chr1 90204907 90204918 FLI1 JASPAR yes 118325794
chr1 90204911 90204918 SPIB JASPAR yes 30618074
chr1 90204911 90204918 SPIB JASPAR yes 118325795
chr1 90204916 90204931 TFAP2A JASPAR yes 30618075
chr1 90204916 90204931 TFAP2C JASPAR yes 30618076
chr1 90204916 90204931 TFAP2A JASPAR yes 118325796
chr1 90204916 90204931 TFAP2C JASPAR yes 118325797
chr1 90204917 90204936 REST JASPAR yes 30618077
chr1 90204917 90204936 REST JASPAR yes 118325798
chr1 90204919 90204931 TFAP2A JASPAR yes 30618078
chr1 90204919 90204931 TFAP2B JASPAR yes 30618079
chr1 90204919 90204931 TFAP2C JASPAR yes 30618080
chr1 90204919 90204931 TFAP2A JASPAR yes 118325799
chr1 90204919 90204931 TFAP2B JASPAR yes 118325800
chr1 90204919 90204931 TFAP2C JASPAR yes 118325801
chr1 90204920 90204929 TFAP2A JASPAR yes 30618081
chr1 90204920 90204929 TFAP2A JASPAR yes 118325802
chr1 90204921 90204930 TFAP2A JASPAR yes 30618082
chr1 90204921 90204930 TFAP2A JASPAR yes 118325803
chr1 90204967 90204981 JUN JASPAR yes 30618083
chr1 90204967 90204981 JUN JASPAR yes 118325804
chr1 90204970 90204981 FOSL2 JASPAR yes 30618084
chr1 90204970 90204981 JUNB JASPAR yes 30618085
chr1 90204970 90204981 FOSL2 JASPAR yes 118325805
chr1 90204970 90204981 JUNB JASPAR yes 118325806
chr1 90204971 90204982 FOS JASPAR yes 30618086
chr1 90204971 90204982 FOSL1 JASPAR yes 30618087
chr1 90204971 90204982 JUND JASPAR yes 30618088
chr1 90204971 90204982 FOS JASPAR yes 118325807
chr1 90204971 90204982 FOSL1 JASPAR yes 118325808
chr1 90204971 90204982 JUND JASPAR yes 118325809
chr1 90204972 90204979 JUN TRANSFAC yes 30618089
chr1 90204972 90204979 JUN TRANSFAC yes 118325810
chr1 90204972 90204983 JUNB JASPAR yes 30618090
chr1 90204972 90204983 NFE2L2 JASPAR yes 30618091
chr1 90204972 90204983 JUNB JASPAR yes 118325811
chr1 90204972 90204983 NFE2L2 JASPAR yes 118325812
chr1 90205067 90205082 STAT2 JASPAR yes 30618092
chr1 90205067 90205082 STAT2 JASPAR yes 118325813
chr1 90205069 90205090 IRF1 JASPAR yes 30618093
chr1 90205069 90205090 IRF1 JASPAR yes 118325814
chr1 90205076 90205097 IRF1 JASPAR yes 30618094
chr1 90205076 90205097 IRF1 JASPAR yes 118325815
chr1 90205081 90205093 IRF1 JASPAR yes 30618095
chr1 90205081 90205093 IRF1 JASPAR yes 118325816
chr1 90205082 90205103 IRF1 JASPAR yes 30618096
chr1 90205082 90205103 IRF1 JASPAR yes 118325817
chr1 90205086 90205100 SPIC JASPAR yes 30618097
chr1 90205086 90205100 SPIC JASPAR yes 118325818
chr1 90205091 90205102 NFKB1 JASPAR yes 30618098
chr1 90205091 90205102 NFKB1 JASPAR yes 118325819
chr1 90205092 90205102 RELA JASPAR yes 30618099
chr1 90205092 90205102 RELA JASPAR yes 118325820
chr1 90205093 90205103 RELA JASPAR yes 30618100
chr1 90205093 90205103 RELA JASPAR yes 118325821
chr1 90205108 90205123 HSF1 JASPAR yes 30618101
chr1 90205108 90205123 HSF1 JASPAR yes 118325822
chr1 90205109 90205122 HSF1 JASPAR yes 30618102
chr1 90205109 90205122 HSF2 JASPAR yes 30618103
chr1 90205109 90205122 HSF1 JASPAR yes 118325823
chr1 90205109 90205122 HSF2 JASPAR yes 118325824
chr1 90205109 90205126 BCL6B JASPAR yes 30618104
chr1 90205109 90205126 BCL6B JASPAR yes 118325825
chr1 90205110 90205125 STAT1 JASPAR yes 30618105
chr1 90205110 90205125 STAT1 JASPAR yes 118325826
chr1 90205112 90205123 STAT1 JASPAR yes 30618106
chr1 90205112 90205123 STAT3 JASPAR yes 30618107
chr1 90205112 90205123 STAT1 JASPAR yes 118325827
chr1 90205112 90205123 STAT3 JASPAR yes 118325828
chr1 90205129 90205133 TEAD2 TRANSFAC yes 30618108
chr1 90205129 90205133 TEAD2 TRANSFAC yes 118325829
chr1 90205131 90205134 MYB TRANSFAC yes 30618109
chr1 90205131 90205134 MYB TRANSFAC yes 118325830
chr1 90205160 90205167 MEIS1 JASPAR yes 30618110
chr1 90205160 90205167 MEIS1 JASPAR yes 118325831
chr1 90205160 90205168 MEIS2 JASPAR yes 30618111
chr1 90205160 90205168 MEIS3 JASPAR yes 30618112
chr1 90205160 90205168 MEIS2 JASPAR yes 118325832
chr1 90205160 90205168 MEIS3 JASPAR yes 118325833
chr1 90205181 90205193 TFAP2A JASPAR yes 30618113
chr1 90205181 90205193 TFAP2B JASPAR yes 30618114
chr1 90205181 90205193 TFAP2C JASPAR yes 30618115
chr1 90205181 90205193 TFAP2A JASPAR yes 118325834
chr1 90205181 90205193 TFAP2B JASPAR yes 118325835
chr1 90205181 90205193 TFAP2C JASPAR yes 118325836
chr1 90205224 90205236 TAL1 JASPAR yes 30618116
chr1 90205224 90205236 TAL1 JASPAR yes 118325837
chr1 90205225 90205237 PKNOX1 JASPAR yes 30618117
chr1 90205225 90205237 PKNOX2 JASPAR yes 30618118
chr1 90205225 90205237 TGIF1 JASPAR yes 30618119
chr1 90205225 90205237 TGIF2 JASPAR yes 30618120
chr1 90205225 90205237 PKNOX1 JASPAR yes 118325838
chr1 90205225 90205237 PKNOX2 JASPAR yes 118325839
chr1 90205225 90205237 TGIF1 JASPAR yes 118325840
chr1 90205225 90205237 TGIF2 JASPAR yes 118325841
chr1 90205226 90205236 MYF6 JASPAR yes 30618121
chr1 90205226 90205236 NEUROG2 JASPAR yes 30618122
chr1 90205226 90205236 MYF6 JASPAR yes 118325842
chr1 90205226 90205236 NEUROG2 JASPAR yes 118325843
chr1 90205226 90205238 TAL1 JASPAR yes 30618123
chr1 90205226 90205238 TAL1 JASPAR yes 118325844
chr1 90205232 90205243 FOXA1 JASPAR yes 30618124
chr1 90205232 90205243 FOXA1 JASPAR yes 118325845
chr1 90205240 90205244 YY1 TRANSFAC yes 30618125
chr1 90205240 90205244 YY1 TRANSFAC yes 118325846
SNP sites on vista2396[chr1:90204490-90205244]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90204525 rs77303182 A G no 470858
chr1 90204579 rs113453744 G A
SRF
470859
chr1 90204619 rs116109746 A G
RREB1 ZBTB18
470860
chr1 90204708 rs111278419 C T no 470861
chr1 90204754 rs564250619 A C
GLIS2 GLIS3 NR2C2 RREB1 SP1 ZNF263 ZNF740
470862
chr1 90204759 rs144616833 C G
GLIS2 GLIS3 H1TF2 NFE NR2C2 RREB1 SP1 SRF ZNF263
470863
chr1 90204780 rs72712599 G C no 470864
chr1 90204834 rs111806690 A G
CTCF
470865
chr1 90204935 rs540064323 C T
REST
470866
chr1 90204969 rs113544880 G A
JUN
470867
chr1 90205209 rs11802767 C T no 470868
chr1 90205230 rs541738124 A G
MYF6 NEUROG2 PKNOX1 PKNOX2 TAL1 TGIF1 TGIF2
470869
chr1 90205244 rs113623765 T G
YY1
470870
Genes possibly regulated by vista2396[chr1:90204490-90205244]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 18671
Expression level of Genes
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miRNAs possibly regulated by vista2396[chr1:90204490-90205244]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results